RNA–Protein interactions for RNA: YDR064W

RPS13, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS13, Length 456 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS13	YDR064W	TOR1	P35169	2470 aa		3.67	□□□□□ -1.82
RPS13	YDR064W	LEU2	P04173	364 aa	Predicted RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	CDC33	P07260	213 aa	Known RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	RPS18A	P0CX55	146 aa	Known RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	RPS18B	P0CX56	146 aa	Predicted RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	CDC34	P14682	295 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	PDA1	P16387	420 aa	Known RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	GRX2	P17695	143 aa	Known RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	STE18	P18852	110 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	MAG1	P22134	296 aa	Known RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	RPS1B	P23248	255 aa	Known RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	VBA3	P25594	458 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	ILV6	P25605	309 aa	Known RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	PTC6	P25646	442 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	PEX4	P29340	183 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	BEM1	P29366	551 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	AAR2	P32357	355 aa	Predicted RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	HOG1	P32485	435 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	RML2	P32611	393 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	SSS1	P35179	80 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	COS9	P36034	407 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	YKL075C	P36083	450 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	DRE2	P36152	348 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	AVT5	P38176	459 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	GPB2	P39717	880 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	VPS52	P39904	641 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	HXT13	P39924	564 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	PIC2	P40035	300 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	SHR5	P41912	237 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	HIT1	P46973	164 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	MNN5	P46982	586 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	ECM27	P47144	725 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	AAD10	P47182	288 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	FAA4	P47912	694 aa	Known RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	YPT11	P48559	417 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	RPS12	P48589	143 aa	Known RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	AVT4	P50944	713 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	YGL101W	P53144	215 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	YGL039W	P53183	348 aa	Known RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	PNC1	P53184	216 aa	Known RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	APS2	Q00381	147 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	YPL014W	Q02606	381 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	ODC1	Q03028	310 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	SNO1	Q03144	224 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	TDA1	Q03533	586 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	RKM2	Q03942	479 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	YLR225C	Q05948	407 aa	Known RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	ATG39	Q06159	398 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	YDR306C	Q06640	478 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	SLF1	Q12034	447 aa	Known RBP	3.66	□□□□□ -1.82
RPS13	YDR064W	PER33	Q12144	273 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	UBX3	Q12229	455 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	TPO4	Q12256	659 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	ATP14	Q12349	124 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	YLR099W-A	Q3E798	87 aa		3.66	□□□□□ -1.82
RPS13	YDR064W	VPS63	O13549	108 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	YBR085C-A	O43137	85 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	CBP1	P07252	654 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	YFR010W-A	P0C5N0	62 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	DDI2	P0CH63	225 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	DDI3	P0CH64	225 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	RPS4A	P0CX35	261 aa	Known RBP	3.65	□□□□□ -1.83
RPS13	YDR064W	RPS4B	P0CX36	261 aa	Known RBP	3.65	□□□□□ -1.83
RPS13	YDR064W	GUK1	P15454	187 aa	Known RBP	3.65	□□□□□ -1.83
RPS13	YDR064W	URK1	P27515	501 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	SBA1	P28707	216 aa	Known RBP	3.65	□□□□□ -1.83
RPS13	YDR064W	MCM5	P29496	775 aa	Known RBP	3.65	□□□□□ -1.83
RPS13	YDR064W	MRPL9	P31334	269 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	LDS1	P31379	325 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.65	□□□□□ -1.83	not detected
RPS13	YDR064W	UGA4	P32837	571 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	SER1	P33330	395 aa	Known RBP	3.65	□□□□□ -1.83
RPS13	YDR064W	PRP18	P33411	251 aa	Predicted RBP	3.65	□□□□□ -1.83
RPS13	YDR064W	LST4	P34239	828 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	TCD2	P36101	447 aa	Known RBP	3.65	□□□□□ -1.83
RPS13	YDR064W	MRPL24	P36525	258 aa	Predicted RBP	3.65	□□□□□ -1.83
RPS13	YDR064W	SOL2	P37262	315 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	SHM2	P37291	469 aa	Known RBP	3.65	□□□□□ -1.83
RPS13	YDR064W	IST2	P38250	946 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	EXO5	P38289	585 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	VHC1	P38329	1120 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	BIG1	P38813	335 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	ELO3	P40319	345 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	RFC2	P40348	353 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	TIR3	P40552	269 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	CDC40	P40968	455 aa	Predicted RBP	3.65	□□□□□ -1.83
RPS13	YDR064W	BAP3	P41815	604 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	OYE3	P41816	400 aa	Predicted RBP	3.65	□□□□□ -1.83
RPS13	YDR064W	YFL052W	P43551	465 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	BST1	P43571	1029 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	TOS3	P43637	560 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	EAF6	P47128	113 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	HSV2	P50079	448 aa	Predicted RBP	3.65	□□□□□ -1.83
RPS13	YDR064W	BIO3	P50277	480 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	DIA3	P52290	468 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	DSD1	P53095	428 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	FLC3	P53121	802 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	RTT102	P53330	157 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	SPC98	P53540	846 aa		3.65	□□□□□ -1.83
RPS13	YDR064W	BOR1	P53838	576 aa		3.65	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 103.3 ms