RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C PBP4Q07362 185 aaKnown RBP2.93□□□□□ -1.94
RRP42YDL111C YLR012CQ07927 99 aa2.93□□□□□ -1.94
RRP42YDL111C SLM3Q12093 417 aa2.93□□□□□ -1.94
RRP42YDL111C FRE8Q12209 686 aa2.93□□□□□ -1.94
RRP42YDL111C RUD3Q12234 484 aaKnown RBP2.93□□□□□ -1.94
RRP42YDL111C SFM1Q12314 213 aa2.93□□□□□ -1.94
RRP42YDL111C MED4Q12343 284 aa2.93□□□□□ -1.94
RRP42YDL111C RPN6Q12377 434 aa2.93□□□□□ -1.94
RRP42YDL111C REP1P03871 373 aa2.92□□□□□ -1.94
RRP42YDL111C UNG1P12887 359 aa2.92□□□□□ -1.94
RRP42YDL111C HPR1P17629 752 aaKnown RBP2.92□□□□□ -1.94
RRP42YDL111C MIR1P23641 311 aaKnown RBP2.92□□□□□ -1.94
RRP42YDL111C LDS1P31379 325 aa2.92□□□□□ -1.94
RRP42YDL111C GCG1P32656 232 aaKnown RBP2.92□□□□□ -1.94
RRP42YDL111C SKG6P32900 734 aaPredicted RBP2.92□□□□□ -1.94
RRP42YDL111C SWD2P36104 329 aaPredicted RBP2.92□□□□□ -1.94
RRP42YDL111C DTR1P38125 572 aa2.92□□□□□ -1.94
RRP42YDL111C SMF2P38778 549 aa2.92□□□□□ -1.94
RRP42YDL111C TDA11P38854 504 aa2.92□□□□□ -1.94
RRP42YDL111C YNL208WP40159 199 aaKnown RBP2.92□□□□□ -1.94
RRP42YDL111C BOR1P53838 576 aa2.92□□□□□ -1.94
RRP42YDL111C SED5Q01590 340 aa2.92□□□□□ -1.94
RRP42YDL111C YPL077CQ02831 240 aa2.92□□□□□ -1.94
RRP42YDL111C YLR173WQ06247 608 aa2.92□□□□□ -1.94
RRP42YDL111C GPN3Q06543 272 aa2.92□□□□□ -1.94
RRP42YDL111C RDL2Q08742 149 aaKnown RBP2.92□□□□□ -1.94
RRP42YDL111C YPQ1Q12010 308 aa2.92□□□□□ -1.94
RRP42YDL111C PRM4Q12498 284 aa2.92□□□□□ -1.94
RRP42YDL111C IZH4Q99393 312 aa2.92□□□□□ -1.94
RRP42YDL111C SSK22P25390 1331 aaPredicted RBP2.92□□□□□ -1.94
RRP42YDL111C CBS2P14905 389 aa2.91□□□□□ -1.94
RRP42YDL111C RVS161P25343 265 aaKnown RBP2.91□□□□□ -1.94
RRP42YDL111C GIT1P25346 518 aa2.91□□□□□ -1.94
RRP42YDL111C CPR3P25719 182 aa2.91□□□□□ -1.94
RRP42YDL111C CSE2P33308 149 aa2.91□□□□□ -1.94
RRP42YDL111C YGR210CP42942 411 aa2.91□□□□□ -1.94
RRP42YDL111C MOB2P43563 287 aa2.91□□□□□ -1.94
RRP42YDL111C ATG18P43601 500 aa2.91□□□□□ -1.94
RRP42YDL111C YAR1P46683 200 aa2.91□□□□□ -1.94
RRP42YDL111C BIR1P47134 954 aa2.91□□□□□ -1.94
RRP42YDL111C BNS1P50084 137 aa2.91□□□□□ -1.94
RRP42YDL111C CRH1P53301 507 aa2.91□□□□□ -1.94
RRP42YDL111C SUR7P54003 302 aa2.91□□□□□ -1.94
RRP42YDL111C FSH2Q05015 223 aa2.91□□□□□ -1.94
RRP42YDL111C GAS2Q06135 555 aa2.91□□□□□ -1.94
RRP42YDL111C DTD1Q07648 150 aaKnown RBP2.91□□□□□ -1.94
RRP42YDL111C MFG1Q07684 458 aa2.91□□□□□ -1.94
RRP42YDL111C PLP2Q12017 286 aa2.91□□□□□ -1.94
RRP42YDL111C ERP3Q12403 225 aa2.91□□□□□ -1.94
RRP42YDL111C IZH2Q12442 317 aa2.91□□□□□ -1.94
RRP42YDL111C NAG1Q8TGN9 163 aa2.91□□□□□ -1.94
RRP42YDL111C SAL1D6W196 494 aa2.9□□□□□ -1.95
RRP42YDL111C COX2P00410 251 aa2.9□□□□□ -1.95
RRP42YDL111C MSF1P08425 469 aa2.9□□□□□ -1.95
RRP42YDL111C YSR3P23501 404 aa2.9□□□□□ -1.95
RRP42YDL111C NUP2P32499 720 aa2.9□□□□□ -1.95
RRP42YDL111C COS9P36034 407 aa2.9□□□□□ -1.95
RRP42YDL111C RFS1P38234 210 aaKnown RBP2.9□□□□□ -1.95
RRP42YDL111C TAE1P38340 232 aa2.9□□□□□ -1.95
RRP42YDL111C HSM3P38348 480 aa2.9□□□□□ -1.95
RRP42YDL111C KRE9P39005 276 aa2.9□□□□□ -1.95
RRP42YDL111C YER186CP40101 306 aa2.9□□□□□ -1.95
RRP42YDL111C EGT2P42835 1041 aa2.9□□□□□ -1.95
RRP42YDL111C AIM23P47015 356 aa2.9□□□□□ -1.95
RRP42YDL111C SWC4P53201 476 aa2.9□□□□□ -1.95
RRP42YDL111C SKI8Q02793 397 aaPredicted RBP2.9□□□□□ -1.95
RRP42YDL111C SRL4Q03085 281 aa2.9□□□□□ -1.95
RRP42YDL111C GRX3Q03835 250 aa2.9□□□□□ -1.95
RRP42YDL111C SNX41Q04053 625 aa2.9□□□□□ -1.95
RRP42YDL111C YHC1Q05900 231 aaKnown RBP2.9□□□□□ -1.95
RRP42YDL111C BOP2Q06150 570 aa2.9□□□□□ -1.95
RRP42YDL111C MRX9Q07349 420 aaKnown RBP2.9□□□□□ -1.95
RRP42YDL111C ATP16Q12165 160 aa2.9□□□□□ -1.95
RRP42YDL111C STE7P06784 515 aa2.89□□□□□ -1.95
RRP42YDL111C RPL31AP0C2H8 113 aaKnown RBP2.89□□□□□ -1.95
RRP42YDL111C RPL16BP26785 198 aaKnown RBP2.89□□□□□ -1.95
RRP42YDL111C NAM9P27929 486 aa2.89□□□□□ -1.95
RRP42YDL111C PDC2P32896 925 aa2.89□□□□□ -1.95
RRP42YDL111C KTI12P34253 313 aaKnown RBP2.89□□□□□ -1.95
RRP42YDL111C YKL063CP35725 167 aa2.89□□□□□ -1.95
RRP42YDL111C MCH2P36032 473 aa2.89□□□□□ -1.95
RRP42YDL111C RPC37P36121 282 aa2.89□□□□□ -1.95
RRP42YDL111C SLM1P40485 686 aa2.89□□□□□ -1.95
RRP42YDL111C SHQ1P40486 507 aaPredicted RBP2.89□□□□□ -1.95
RRP42YDL111C YGL242CP53066 181 aa2.89□□□□□ -1.95
RRP42YDL111C VAC7P53950 1165 aa2.89□□□□□ -1.95
RRP42YDL111C CWC21Q03375 135 aaKnown RBP2.89□□□□□ -1.95
RRP42YDL111C FAR10Q06001 478 aa2.89□□□□□ -1.95
RRP42YDL111C ASR1Q06834 288 aa2.89□□□□□ -1.95
RRP42YDL111C RPN8Q08723 338 aaKnown RBP2.89□□□□□ -1.95
RRP42YDL111C TAF10Q12030 206 aa2.89□□□□□ -1.95
RRP42YDL111C YOL107WQ12239 342 aa2.89□□□□□ -1.95
RRP42YDL111C MCT1Q12283 360 aa2.89□□□□□ -1.95
RRP42YDL111C UTP23Q12339 254 aaKnown RBP2.89□□□□□ -1.95
RRP42YDL111C TDH3P00359 332 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
RRP42YDL111C ILV1P00927 576 aaKnown RBP2.88□□□□□ -1.95
RRP42YDL111C POL30P15873 258 aaKnown RBP2.88□□□□□ -1.95
RRP42YDL111C AAT2P23542 418 aaKnown RBP2.88□□□□□ -1.95
RRP42YDL111C URA10P30402 227 aa2.88□□□□□ -1.95
RRP42YDL111C PMT2P31382 759 aa2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms