RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C BAR1P12630 587 aa3.61□□□□□ -1.83
PRP11YDL043C CBS2P14905 389 aa3.61□□□□□ -1.83
PRP11YDL043C COQ1P18900 473 aa3.61□□□□□ -1.83
PRP11YDL043C CPR4P25334 318 aa3.61□□□□□ -1.83
PRP11YDL043C RPS2P25443 254 aaKnown RBP3.61□□□□□ -1.83
PRP11YDL043C PBN1P25580 416 aa3.61□□□□□ -1.83
PRP11YDL043C FUN19P28003 413 aaPredicted RBP3.61□□□□□ -1.83
PRP11YDL043C ECM25P32525 599 aa3.61□□□□□ -1.83
PRP11YDL043C REC114P32841 428 aa3.61□□□□□ -1.83
PRP11YDL043C MNS1P32906 549 aa3.61□□□□□ -1.83
PRP11YDL043C PDR3P33200 976 aa3.61□□□□□ -1.83
PRP11YDL043C RPS1AP33442 255 aaKnown RBP3.61□□□□□ -1.83
PRP11YDL043C SHG1P38337 142 aa3.61□□□□□ -1.83
PRP11YDL043C NVJ1P38881 321 aa3.61□□□□□ -1.83
PRP11YDL043C CYC2P38909 366 aa3.61□□□□□ -1.83
PRP11YDL043C FAD1P38913 306 aa3.61□□□□□ -1.83
PRP11YDL043C MLH1P38920 769 aa3.61□□□□□ -1.83
PRP11YDL043C CCT2P39076 527 aaKnown RBP3.61□□□□□ -1.83
PRP11YDL043C VMA7P39111 118 aa3.61□□□□□ -1.83
PRP11YDL043C YER130CP39959 443 aa3.61□□□□□ -1.83
PRP11YDL043C COX15P40086 486 aa3.61□□□□□ -1.83
PRP11YDL043C RPE1P46969 238 aa3.61□□□□□ -1.83
PRP11YDL043C YGL159WP53110 370 aa3.61□□□□□ -1.83
PRP11YDL043C OCA2P53949 197 aa3.61□□□□□ -1.83
PRP11YDL043C DYN2Q02647 92 aa3.61□□□□□ -1.83
PRP11YDL043C FMP42Q04991 504 aa3.61□□□□□ -1.83
PRP11YDL043C MDM30Q05930 598 aa3.61□□□□□ -1.83
PRP11YDL043C DIC1Q06143 298 aa3.61□□□□□ -1.83
PRP11YDL043C NEJ1Q06148 342 aa3.61□□□□□ -1.83
PRP11YDL043C FRQ1Q06389 190 aa3.61□□□□□ -1.83
PRP11YDL043C SNA4Q07549 140 aa3.61□□□□□ -1.83
PRP11YDL043C PML1Q07930 204 aaPredicted RBP3.61□□□□□ -1.83
PRP11YDL043C APC9Q12107 265 aa3.61□□□□□ -1.83
PRP11YDL043C YLR112WQ12130 139 aa3.61□□□□□ -1.83
PRP11YDL043C YLR108CQ12259 485 aa3.61□□□□□ -1.83
PRP11YDL043C AUS1Q08409 1394 aa3.61□□□□□ -1.83
PRP11YDL043C CDC28P00546 298 aaKnown RBP3.6□□□□□ -1.83
PRP11YDL043C MES1P00958 751 aaKnown RBP3.6□□□□□ -1.83
PRP11YDL043C RPP0P05317 312 aaKnown RBP3.6□□□□□ -1.83
PRP11YDL043C NFT1P0CE68 1218 aa3.6□□□□□ -1.83
PRP11YDL043C ERG11P10614 530 aa3.6□□□□□ -1.83
PRP11YDL043C NHP6BP11633 99 aaKnown RBP3.6□□□□□ -1.83
PRP11YDL043C REV1P12689 985 aa3.6□□□□□ -1.83
PRP11YDL043C FRS2P15625 503 aaKnown RBP3.6□□□□□ -1.83
PRP11YDL043C URA6P15700 204 aa3.6□□□□□ -1.83
PRP11YDL043C PET9P18239 318 aaKnown RBP3.6□□□□□ -1.83
PRP11YDL043C ZRC1P20107 442 aa3.6□□□□□ -1.83
PRP11YDL043C APA2P22108 325 aa3.6□□□□□ -1.83
PRP11YDL043C AIM17P23180 465 aaKnown RBP3.6□□□□□ -1.83
PRP11YDL043C DBR1P24309 405 aaKnown RBP3.6□□□□□ -1.83
PRP11YDL043C RCN1P36054 211 aa3.6□□□□□ -1.83
PRP11YDL043C YKL070WP36087 169 aa3.6□□□□□ -1.83
PRP11YDL043C MRPL4P36517 319 aa3.6□□□□□ -1.83
PRP11YDL043C YCR087C-AP37263 153 aa3.6□□□□□ -1.83
PRP11YDL043C ASC1P38011 319 aaKnown RBP3.6□□□□□ -1.83
PRP11YDL043C ECM31P38122 312 aa3.6□□□□□ -1.83
PRP11YDL043C DTR1P38125 572 aa3.6□□□□□ -1.83
PRP11YDL043C PFF1P38244 976 aa3.6□□□□□ -1.83
PRP11YDL043C PCA1P38360 1216 aa3.6□□□□□ -1.83
PRP11YDL043C AIM18P38884 321 aa3.6□□□□□ -1.83
PRP11YDL043C CFD1P40558 293 aa3.6□□□□□ -1.83
PRP11YDL043C CDC40P40968 455 aaPredicted RBP3.6□□□□□ -1.83
PRP11YDL043C RPA34P47006 233 aaPredicted RBP3.6□□□□□ -1.83
PRP11YDL043C YJR030CP47101 745 aa3.6□□□□□ -1.83
PRP11YDL043C YJR111CP47148 283 aaKnown RBP3.6□□□□□ -1.83
PRP11YDL043C YJR149WP47177 404 aa3.6□□□□□ -1.83
PRP11YDL043C YPT11P48559 417 aa3.6□□□□□ -1.83
PRP11YDL043C AZR1P50080 613 aa3.6□□□□□ -1.83
PRP11YDL043C UFD1P53044 361 aa3.6□□□□□ -1.83
PRP11YDL043C GPI1P53306 609 aa3.6□□□□□ -1.83
PRP11YDL043C YNL134CP53912 376 aaKnown RBP3.6□□□□□ -1.83
PRP11YDL043C LGE1Q02796 332 aaKnown RBP3.6□□□□□ -1.83
PRP11YDL043C YMR209CQ03648 457 aa3.6□□□□□ -1.83
PRP11YDL043C TRM82Q03774 444 aa3.6□□□□□ -1.83
PRP11YDL043C ECI1Q05871 280 aa3.6□□□□□ -1.83
PRP11YDL043C RAX1Q08760 435 aa3.6□□□□□ -1.83
PRP11YDL043C YPL257WQ08974 193 aa3.6□□□□□ -1.83
PRP11YDL043C RUP1Q12242 671 aa3.6□□□□□ -1.83
PRP11YDL043C YDR061WQ12298 539 aa3.6□□□□□ -1.83
PRP11YDL043C HRT3Q12347 344 aa3.6□□□□□ -1.83
PRP11YDL043C REV3P14284 1504 aa3.6□□□□□ -1.83
PRP11YDL043C TDH2P00358 332 aaKnown RBP3.59□□□□□ -1.83
PRP11YDL043C TDH3P00359 332 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
PRP11YDL043C COX3P00420 269 aa3.59□□□□□ -1.83
PRP11YDL043C MRP1P10662 321 aaKnown RBP3.59□□□□□ -1.83
PRP11YDL043C ZWF1P11412 505 aaKnown RBP3.59□□□□□ -1.83
PRP11YDL043C SCL1P21243 252 aaKnown RBP3.59□□□□□ -1.83
PRP11YDL043C HXT2P23585 541 aa3.59□□□□□ -1.83
PRP11YDL043C RPL24BP24000 155 aaKnown RBP3.59□□□□□ -1.83
PRP11YDL043C RRT12P25381 491 aa3.59□□□□□ -1.83
PRP11YDL043C RIM1P32445 135 aaKnown RBP3.59□□□□□ -1.83
PRP11YDL043C PHA2P32452 334 aa3.59□□□□□ -1.83
PRP11YDL043C UTR4P32626 227 aa3.59□□□□□ -1.83
PRP11YDL043C GSP1P32835 219 aaKnown RBP3.59□□□□□ -1.83
PRP11YDL043C GSP2P32836 220 aaKnown RBP3.59□□□□□ -1.83
PRP11YDL043C TIP20P33891 701 aa3.59□□□□□ -1.83
PRP11YDL043C PTC1P35182 281 aa3.59□□□□□ -1.83
PRP11YDL043C DOA1P36037 715 aa3.59□□□□□ -1.83
PRP11YDL043C PHD1P36093 366 aa3.59□□□□□ -1.83
PRP11YDL043C SPC34P36131 295 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms