RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W TOS1P38288 455 aa13.65□□□□□ -0.22
MSF1YPR047W SAP155P43612 1002 aa13.64□□□□□ -0.23
MSF1YPR047W EAF6P47128 113 aa13.64□□□□□ -0.23
MSF1YPR047W KAR2P16474 682 aaKnown RBP13.63□□□□□ -0.23
MSF1YPR047W PDS5Q04264 1277 aa13.63□□□□□ -0.23
MSF1YPR047W MHP1P43638 1398 aa13.62□□□□□ -0.23
MSF1YPR047W BUB1P41695 1021 aaKnown RBP RIP-Chip data13.62□□□□□ -0.23not detected
MSF1YPR047W YBP2P53169 641 aa13.62□□□□□ -0.23
MSF1YPR047W HPC2Q01448 625 aa13.61□□□□□ -0.23
MSF1YPR047W HSP104P31539 908 aaKnown RBP13.58□□□□□ -0.24
MSF1YPR047W MSN5P52918 1224 aa13.58□□□□□ -0.24
MSF1YPR047W DSD1P53095 428 aa13.58□□□□□ -0.24
MSF1YPR047W NUP145P49687 1317 aa13.58□□□□□ -0.24
MSF1YPR047W CTF4Q01454 927 aa13.56□□□□□ -0.24
MSF1YPR047W TUM1Q08686 304 aaKnown RBP13.56□□□□□ -0.24
MSF1YPR047W CTT1P06115 562 aa13.54□□□□□ -0.24
MSF1YPR047W RIX7Q07844 837 aaKnown RBP13.54□□□□□ -0.24
MSF1YPR047W POL5P39985 1022 aaKnown RBP13.53□□□□□ -0.24
MSF1YPR047W RRT14P40470 206 aa13.52□□□□□ -0.25
MSF1YPR047W PAP2P53632 584 aaKnown RBP13.52□□□□□ -0.25
MSF1YPR047W AKL1P38080 1108 aaKnown RBP13.5□□□□□ -0.25
MSF1YPR047W YER156CP40093 338 aaKnown RBP13.5□□□□□ -0.25
MSF1YPR047W YKL222CP35995 705 aa13.49□□□□□ -0.25
MSF1YPR047W NYV1Q12255 253 aa13.48□□□□□ -0.25
MSF1YPR047W ERT1P38140 529 aa13.47□□□□□ -0.25
MSF1YPR047W KIN4Q01919 800 aa13.47□□□□□ -0.25
MSF1YPR047W RMT2Q03305 412 aa13.47□□□□□ -0.25
MSF1YPR047W AOS1Q06624 347 aa13.47□□□□□ -0.25
MSF1YPR047W CWH41P53008 833 aa13.46□□□□□ -0.26
MSF1YPR047W TRK1P12685 1235 aa13.45□□□□□ -0.26
MSF1YPR047W CTI6Q08923 506 aa13.45□□□□□ -0.26
MSF1YPR047W BUD27P43573 796 aaKnown RBP RIP-Chip data13.44□□□□□ -0.26not detected
MSF1YPR047W NST1P53935 1240 aa13.44□□□□□ -0.26
MSF1YPR047W TEA1P47988 759 aa13.43□□□□□ -0.26
MSF1YPR047W SQS1P53866 767 aaKnown RBP13.43□□□□□ -0.26
MSF1YPR047W KCC4P25389 1037 aa13.41□□□□□ -0.26
MSF1YPR047W RRD1P40454 393 aaKnown RBP13.41□□□□□ -0.26
MSF1YPR047W MDG1P53885 366 aa13.4□□□□□ -0.26
MSF1YPR047W NOP53Q12080 455 aaKnown RBP13.4□□□□□ -0.26
MSF1YPR047W ALE1Q08548 619 aa13.39□□□□□ -0.27
MSF1YPR047W UTP10P42945 1769 aaKnown RBP13.39□□□□□ -0.27
MSF1YPR047W NTH2P35172 780 aa13.39□□□□□ -0.27
MSF1YPR047W SER1P33330 395 aaKnown RBP13.38□□□□□ -0.27
MSF1YPR047W PFF1P38244 976 aa13.38□□□□□ -0.27
MSF1YPR047W LPD1P09624 499 aaKnown RBP13.37□□□□□ -0.27
MSF1YPR047W PHM7Q12252 991 aa13.37□□□□□ -0.27
MSF1YPR047W YFR016CP43597 1233 aaKnown RBP13.35□□□□□ -0.27
MSF1YPR047W SMY1P32364 656 aaKnown RBP13.33□□□□□ -0.28
MSF1YPR047W RAT1Q02792 1006 aaKnown RBP13.33□□□□□ -0.28
MSF1YPR047W SSA4P22202 642 aaKnown RBP13.31□□□□□ -0.28
MSF1YPR047W YGL082WP53155 381 aa13.31□□□□□ -0.28
MSF1YPR047W FPK1P53739 893 aa13.31□□□□□ -0.28
MSF1YPR047W SSP2Q08646 371 aa13.31□□□□□ -0.28
MSF1YPR047W UGA3P26370 528 aa13.3□□□□□ -0.28
MSF1YPR047W PEX21P50091 288 aa13.3□□□□□ -0.28
MSF1YPR047W RRP46P53256 223 aaPredicted RBP13.3□□□□□ -0.28
MSF1YPR047W ERO1Q03103 563 aa13.28□□□□□ -0.28
MSF1YPR047W IRC3Q06683 689 aa13.28□□□□□ -0.28
MSF1YPR047W BDF2Q07442 638 aa13.28□□□□□ -0.28
MSF1YPR047W TOP1P04786 769 aa13.27□□□□□ -0.29
MSF1YPR047W NSE3Q05541 303 aa13.27□□□□□ -0.29
MSF1YPR047W YNL050CP53952 270 aa13.26□□□□□ -0.29
MSF1YPR047W DIB1Q06819 143 aaPredicted RBP13.26□□□□□ -0.29
MSF1YPR047W PUS5Q06244 254 aa13.25□□□□□ -0.29
MSF1YPR047W SLI15P38283 698 aa13.24□□□□□ -0.29
MSF1YPR047W RPS9BP05755 195 aaKnown RBP13.23□□□□□ -0.29
MSF1YPR047W ICL1P28240 557 aaPredicted RBP13.23□□□□□ -0.29
MSF1YPR047W PMD1P32634 1753 aa13.23□□□□□ -0.29
MSF1YPR047W ARG8P18544 423 aa13.22□□□□□ -0.29
MSF1YPR047W PSD2P53037 1138 aaKnown RBP13.22□□□□□ -0.29
MSF1YPR047W CAF20P12962 161 aaKnown RBP13.21□□□□□ -0.3
MSF1YPR047W SIT4P20604 311 aa13.21□□□□□ -0.3
MSF1YPR047W ATG20Q07528 640 aa13.21□□□□□ -0.3
MSF1YPR047W DCD1P06773 312 aa13.2□□□□□ -0.3
MSF1YPR047W SHC1P39000 512 aa13.2□□□□□ -0.3
MSF1YPR047W RTR1P40084 226 aaPredicted RBP13.2□□□□□ -0.3
MSF1YPR047W LYS2P07702 1392 aa13.19□□□□□ -0.3
MSF1YPR047W YKU70P32807 602 aa13.19□□□□□ -0.3
MSF1YPR047W RET1P22276 1149 aaKnown RBP13.18□□□□□ -0.3
MSF1YPR047W PRD1P25375 712 aa13.18□□□□□ -0.3
MSF1YPR047W APL2P36000 726 aaPredicted RBP13.18□□□□□ -0.3
MSF1YPR047W GRX6Q12438 231 aa13.18□□□□□ -0.3
MSF1YPR047W ZDS1P50111 915 aaKnown RBP13.17□□□□□ -0.3
MSF1YPR047W YPR204WQ08995 1032 aa13.17□□□□□ -0.3
MSF1YPR047W THS1P04801 734 aaKnown RBP13.16□□□□□ -0.3
MSF1YPR047W UBP16Q02863 499 aa13.14□□□□□ -0.31
MSF1YPR047W VPS64Q03944 604 aa13.14□□□□□ -0.31
MSF1YPR047W HAT1Q12341 374 aa13.14□□□□□ -0.31
MSF1YPR047W SSK22P25390 1331 aaPredicted RBP13.14□□□□□ -0.31
MSF1YPR047W RPN1P38764 993 aaKnown RBP13.13□□□□□ -0.31
MSF1YPR047W MAM1P40065 302 aa13.13□□□□□ -0.31
MSF1YPR047W COQ4O13525 335 aa13.13□□□□□ -0.31
MSF1YPR047W ZDS2P54786 942 aa13.13□□□□□ -0.31
MSF1YPR047W SAS4Q04003 481 aa13.13□□□□□ -0.31
MSF1YPR047W SYF1Q04048 859 aaPredicted RBP13.13□□□□□ -0.31
MSF1YPR047W IOC4Q04213 475 aa13.13□□□□□ -0.31
MSF1YPR047W BMS1Q08965 1183 aaKnown RBP13.13□□□□□ -0.31
MSF1YPR047W RTG2P32608 588 aaKnown RBP13.12□□□□□ -0.31
MSF1YPR047W FRD1P32614 470 aaKnown RBP13.12□□□□□ -0.31
MSF1YPR047W YLR278CQ05854 1341 aa13.11□□□□□ -0.31
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms