RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	RUD3	Q12234	484 aa	Known RBP	4.68	□□□□□ -1.66
HOS3	YPL116W	ERP4	Q12450	207 aa		4.68	□□□□□ -1.66
HOS3	YPL116W	KAR3	P17119	729 aa		4.68	□□□□□ -1.66
HOS3	YPL116W	VMA4	P22203	233 aa	Known RBP	4.68	□□□□□ -1.66
HOS3	YPL116W	BRF1	P29056	596 aa		4.68	□□□□□ -1.66
HOS3	YPL116W	NFU1	P32860	256 aa		4.68	□□□□□ -1.66
HOS3	YPL116W	PRS1	P32895	427 aa	Known RBP	4.68	□□□□□ -1.66
HOS3	YPL116W	YKR023W	P36119	530 aa	Known RBP	4.68	□□□□□ -1.66
HOS3	YPL116W	PAM1	P37304	830 aa	Known RBP	4.68	□□□□□ -1.66
HOS3	YPL116W	IES1	P43579	692 aa		4.68	□□□□□ -1.66
HOS3	YPL116W	KEL2	P50090	882 aa		4.68	□□□□□ -1.66
HOS3	YPL116W	HST2	P53686	357 aa		4.68	□□□□□ -1.66
HOS3	YPL116W	TMA64	Q04600	565 aa	Known RBP	4.68	□□□□□ -1.66
HOS3	YPL116W	AVO1	Q08236	1176 aa		4.68	□□□□□ -1.66
HOS3	YPL116W	PCL8	Q08966	492 aa		4.68	□□□□□ -1.66
HOS3	YPL116W	SNU66	Q12420	587 aa	Predicted RBP	4.68	□□□□□ -1.66
HOS3	YPL116W	SWI6	P09959	803 aa		4.67	□□□□□ -1.66
HOS3	YPL116W	CHZ1	P40019	153 aa	Predicted RBP	4.67	□□□□□ -1.66
HOS3	YPL116W	MEP1	P40260	492 aa		4.67	□□□□□ -1.66
HOS3	YPL116W	ELA1	P53861	379 aa	Predicted RBP	4.67	□□□□□ -1.66
HOS3	YPL116W	COG8	Q04632	607 aa		4.67	□□□□□ -1.66
HOS3	YPL116W	ATG26	Q06321	1198 aa		4.67	□□□□□ -1.66
HOS3	YPL116W	RRP9	Q06506	573 aa	Known RBP	4.67	□□□□□ -1.66
HOS3	YPL116W	MPH3	P0CE00	602 aa		4.66	□□□□□ -1.66
HOS3	YPL116W	SEC23	P15303	768 aa	Known RBP	4.66	□□□□□ -1.66
HOS3	YPL116W	PUP2	P32379	260 aa		4.66	□□□□□ -1.66
HOS3	YPL116W	PEX5	P35056	612 aa		4.66	□□□□□ -1.66
HOS3	YPL116W	MGA2	P40578	1113 aa		4.66	□□□□□ -1.66
HOS3	YPL116W	VPS30	Q02948	557 aa		4.66	□□□□□ -1.66
HOS3	YPL116W	UTP4	Q06679	776 aa	Known RBP	4.66	□□□□□ -1.66
HOS3	YPL116W	LSO1	Q3E827	93 aa		4.66	□□□□□ -1.66
HOS3	YPL116W	NPL4	P33755	580 aa		4.66	□□□□□ -1.66
HOS3	YPL116W	MAL31	P38156	614 aa		4.66	□□□□□ -1.66
HOS3	YPL116W	VHR2	P40041	505 aa		4.66	□□□□□ -1.66
HOS3	YPL116W	RPL17B	P46990	184 aa	Known RBP	4.66	□□□□□ -1.66
HOS3	YPL116W	HUL5	P53119	910 aa		4.66	□□□□□ -1.66
HOS3	YPL116W	REX2	P54964	269 aa	Known RBP	4.66	□□□□□ -1.66
HOS3	YPL116W	THR4	P16120	514 aa	Known RBP	4.65	□□□□□ -1.66
HOS3	YPL116W	ZUO1	P32527	433 aa	Known RBP	4.65	□□□□□ -1.66
HOS3	YPL116W	ARC19	P33204	171 aa	Known RBP	4.65	□□□□□ -1.66
HOS3	YPL116W	EFM2	P38347	419 aa		4.65	□□□□□ -1.66
HOS3	YPL116W	CKB1	P43639	278 aa		4.65	□□□□□ -1.66
HOS3	YPL116W	ITC1	P53125	1264 aa		4.65	□□□□□ -1.66
HOS3	YPL116W	PXR1	P53335	271 aa	Predicted RBP	4.65	□□□□□ -1.66
HOS3	YPL116W	YAF9	P53930	226 aa		4.65	□□□□□ -1.66
HOS3	YPL116W	YHR218W	P38899	603 aa		4.65	□□□□□ -1.67
HOS3	YPL116W	BEM4	P39011	633 aa		4.65	□□□□□ -1.67
HOS3	YPL116W	GPI8	P49018	411 aa		4.65	□□□□□ -1.67
HOS3	YPL116W	TIM11	P81449	96 aa	Predicted RBP	4.65	□□□□□ -1.67
HOS3	YPL116W	YDR338C	Q05497	695 aa		4.65	□□□□□ -1.67
HOS3	YPL116W	CLP1	Q08685	445 aa	Predicted RBP	4.65	□□□□□ -1.67
HOS3	YPL116W	RPC37	P36121	282 aa		4.64	□□□□□ -1.67
HOS3	YPL116W	OCA5	P38738	679 aa		4.64	□□□□□ -1.67
HOS3	YPL116W	TPM2	P40414	161 aa		4.64	□□□□□ -1.67
HOS3	YPL116W	APL6	P46682	809 aa		4.64	□□□□□ -1.67
HOS3	YPL116W	ESF2	P53743	316 aa	Known RBP	4.64	□□□□□ -1.67
HOS3	YPL116W	SRP1	Q02821	542 aa	Known RBP	4.64	□□□□□ -1.67
HOS3	YPL116W	YML119W	Q03208	357 aa		4.64	□□□□□ -1.67
HOS3	YPL116W	ENT2	Q05785	613 aa		4.64	□□□□□ -1.67
HOS3	YPL116W	MDM38	Q08179	573 aa		4.64	□□□□□ -1.67
HOS3	YPL116W	SSF2	Q12153	453 aa	Predicted RBP	4.64	□□□□□ -1.67
HOS3	YPL116W	NOP14	Q99207	810 aa	Known RBP	4.64	□□□□□ -1.67
HOS3	YPL116W	TRS33	Q99394	268 aa		4.64	□□□□□ -1.67
HOS3	YPL116W	SPT5	P27692	1063 aa	Known RBP	4.63	□□□□□ -1.67
HOS3	YPL116W	EFB1	P32471	206 aa	Known RBP	4.63	□□□□□ -1.67
HOS3	YPL116W	IAH1	P41734	238 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	OCA1	P50946	238 aa	Predicted RBP	4.63	□□□□□ -1.67
HOS3	YPL116W	MDM1	Q01846	1127 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	HEH2	Q03281	663 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	COG4	Q06096	861 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	BRR1	Q99177	341 aa	Predicted RBP	4.63	□□□□□ -1.67
HOS3	YPL116W	CYB2	P00175	591 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	ROX1	P25042	368 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	UGA3	P26370	528 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	MET1	P36150	593 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	ESL2	P36168	1195 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	UBP12	P39538	1254 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	SIT1	P39980	628 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	RSC1	P53236	928 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	PHM6	Q05637	104 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	MRD1	Q06106	887 aa	Known RBP	4.63	□□□□□ -1.67
HOS3	YPL116W	SLP1	Q12232	587 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	RKM4	Q12504	494 aa		4.63	□□□□□ -1.67
HOS3	YPL116W	HMG1	P12683	1054 aa		4.62	□□□□□ -1.67
HOS3	YPL116W	RIM101	P33400	625 aa		4.62	□□□□□ -1.67
HOS3	YPL116W	TFB4	Q12004	338 aa		4.62	□□□□□ -1.67
HOS3	YPL116W	HMI1	Q12039	706 aa		4.62	□□□□□ -1.67
HOS3	YPL116W	BUD14	P27637	709 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	RAD16	P31244	790 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	EXO84	P38261	753 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	PPX1	P38698	397 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	YLF2	P38746	405 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	MAM1	P40065	302 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	SDS3	P40505	327 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	ALD4	P46367	519 aa	Known RBP	4.61	□□□□□ -1.67
HOS3	YPL116W	YPP1	P46951	817 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
HOS3	YPL116W	BTN2	P53286	410 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	SMD2	Q06217	110 aa	Known RBP	4.61	□□□□□ -1.67
HOS3	YPL116W	WHI5	Q12416	295 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms