RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS2	YOL047C	STH1	P32597	1359 aa		4.68	□□□□□ -1.66
LDS2	YOL047C	SUP45	P12385	437 aa	Known RBP	4.68	□□□□□ -1.66
LDS2	YOL047C	THI12	P42883	340 aa		4.68	□□□□□ -1.66
LDS2	YOL047C	THI5	P43534	340 aa		4.68	□□□□□ -1.66
LDS2	YOL047C	THI11	P47183	340 aa		4.68	□□□□□ -1.66
LDS2	YOL047C	YAF9	P53930	226 aa		4.68	□□□□□ -1.66
LDS2	YOL047C	CDC73	Q06697	393 aa		4.68	□□□□□ -1.66
LDS2	YOL047C	THI13	Q07748	340 aa		4.68	□□□□□ -1.66
LDS2	YOL047C	KEX1	P09620	729 aa		4.67	□□□□□ -1.66
LDS2	YOL047C	GRS1	P38088	690 aa	Known RBP	4.67	□□□□□ -1.66
LDS2	YOL047C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
LDS2	YOL047C	TPS3	P38426	1054 aa	Known RBP	4.67	□□□□□ -1.66
LDS2	YOL047C	YHL050C	P38721	697 aa		4.67	□□□□□ -1.66
LDS2	YOL047C	YHR219W	P38900	624 aa		4.67	□□□□□ -1.66
LDS2	YOL047C	STM1	P39015	273 aa	Known RBP	4.67	□□□□□ -1.66
LDS2	YOL047C	NNF1	P47149	201 aa		4.67	□□□□□ -1.66
LDS2	YOL047C	YRB30	P53107	440 aa	Predicted RBP	4.67	□□□□□ -1.66
LDS2	YOL047C	WHI5	Q12416	295 aa		4.67	□□□□□ -1.66
LDS2	YOL047C	IKI3	Q06706	1349 aa	Known RBP	4.67	□□□□□ -1.66
LDS2	YOL047C	PPG1	P32838	368 aa		4.66	□□□□□ -1.66
LDS2	YOL047C	SEC8	P32855	1065 aa		4.66	□□□□□ -1.66
LDS2	YOL047C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
LDS2	YOL047C	NIS1	P53939	407 aa		4.66	□□□□□ -1.66
LDS2	YOL047C	MRX10	Q05648	414 aa		4.66	□□□□□ -1.66
LDS2	YOL047C	BUD21	Q08492	214 aa	Predicted RBP	4.66	□□□□□ -1.66
LDS2	YOL047C	MSC6	Q08818	692 aa	Known RBP	4.66	□□□□□ -1.66
LDS2	YOL047C	ARG8	P18544	423 aa		4.65	□□□□□ -1.67
LDS2	YOL047C	TSR4	P25040	408 aa		4.65	□□□□□ -1.67
LDS2	YOL047C	SEC20	P28791	383 aa		4.65	□□□□□ -1.67
LDS2	YOL047C	ASF1	P32447	279 aa		4.65	□□□□□ -1.67
LDS2	YOL047C	RAD54	P32863	898 aa		4.65	□□□□□ -1.67
LDS2	YOL047C	FPK1	P53739	893 aa		4.65	□□□□□ -1.67
LDS2	YOL047C	KAR5	Q04746	504 aa		4.65	□□□□□ -1.67
LDS2	YOL047C	FPR4	Q06205	392 aa	Predicted RBP	4.65	□□□□□ -1.67
LDS2	YOL047C	MAG2	Q06436	670 aa	Known RBP	4.65	□□□□□ -1.67
LDS2	YOL047C	UBX7	P38349	436 aa		4.64	□□□□□ -1.67
LDS2	YOL047C	NMD2	P38798	1089 aa	Known RBP	4.64	□□□□□ -1.67
LDS2	YOL047C	ORC6	P38826	435 aa		4.64	□□□□□ -1.67
LDS2	YOL047C	VAC8	P39968	578 aa		4.64	□□□□□ -1.67
LDS2	YOL047C	RIM21	P48565	533 aa		4.64	□□□□□ -1.67
LDS2	YOL047C	YMR196W	Q04336	1088 aa		4.64	□□□□□ -1.67
LDS2	YOL047C	MMP1	Q12372	583 aa		4.64	□□□□□ -1.67
LDS2	YOL047C	YOL098C	Q12496	1037 aa		4.64	□□□□□ -1.67
LDS2	YOL047C	TRM732	Q03496	1420 aa		4.63	□□□□□ -1.67
LDS2	YOL047C	UBX5	Q06682	500 aa		4.63	□□□□□ -1.67
LDS2	YOL047C	SEC3	P33332	1336 aa	Known RBP	4.63	□□□□□ -1.67
LDS2	YOL047C	MET1	P36150	593 aa		4.62	□□□□□ -1.67
LDS2	YOL047C	POL5	P39985	1022 aa	Known RBP	4.62	□□□□□ -1.67
LDS2	YOL047C	AIR1	P40507	360 aa	Known RBP	4.62	□□□□□ -1.67
LDS2	YOL047C	MDJ2	P42834	146 aa		4.62	□□□□□ -1.67
LDS2	YOL047C	SUB1	P54000	292 aa	Known RBP	4.62	□□□□□ -1.67
LDS2	YOL047C	STB3	Q12427	513 aa		4.62	□□□□□ -1.67
LDS2	YOL047C	RGR1	P19263	1082 aa		4.61	□□□□□ -1.67
LDS2	YOL047C	SIS2	P36024	562 aa		4.61	□□□□□ -1.67
LDS2	YOL047C	TPO2	P53283	614 aa		4.61	□□□□□ -1.67
LDS2	YOL047C	HST2	P53686	357 aa		4.61	□□□□□ -1.67
LDS2	YOL047C	ECM5	Q03214	1411 aa		4.61	□□□□□ -1.67
LDS2	YOL047C	PRT1	P06103	763 aa	Known RBP	4.6	□□□□□ -1.67
LDS2	YOL047C	CIT2	P08679	460 aa		4.6	□□□□□ -1.67
LDS2	YOL047C	TRL1	P09880	827 aa	Known RBP	4.6	□□□□□ -1.67
LDS2	YOL047C	RPP1B	P10622	106 aa	Known RBP	4.6	□□□□□ -1.67
LDS2	YOL047C	RDS2	P19541	446 aa	Known RBP	4.6	□□□□□ -1.67
LDS2	YOL047C	ISF1	P32488	338 aa		4.6	□□□□□ -1.67
LDS2	YOL047C	SRP40	P32583	406 aa	Predicted RBP	4.6	□□□□□ -1.67
LDS2	YOL047C	YKL091C	P33324	310 aa	Known RBP	4.6	□□□□□ -1.67
LDS2	YOL047C	TOM20	P35180	183 aa		4.6	□□□□□ -1.67
LDS2	YOL047C	CSE4	P36012	229 aa		4.6	□□□□□ -1.67
LDS2	YOL047C	ALD3	P54114	506 aa		4.6	□□□□□ -1.67
LDS2	YOL047C	PRS1	P32895	427 aa	Known RBP	4.59	□□□□□ -1.67
LDS2	YOL047C	IOC3	P43596	787 aa		4.59	□□□□□ -1.67
LDS2	YOL047C	ALG12	P53730	551 aa		4.59	□□□□□ -1.67
LDS2	YOL047C	ALD6	P54115	500 aa	Known RBP	4.59	□□□□□ -1.67
LDS2	YOL047C	VPS72	Q03388	795 aa		4.59	□□□□□ -1.67
LDS2	YOL047C	NUP170	P38181	1502 aa		4.58	□□□□□ -1.68
LDS2	YOL047C	PEP12	P32854	288 aa		4.58	□□□□□ -1.68
LDS2	YOL047C	FYV10	P40492	516 aa		4.58	□□□□□ -1.68
LDS2	YOL047C	SVF1	Q05515	481 aa		4.58	□□□□□ -1.68
LDS2	YOL047C	BUD20	Q08004	166 aa	Predicted RBP	4.58	□□□□□ -1.68
LDS2	YOL047C	MCM2	P29469	868 aa		4.57	□□□□□ -1.68
LDS2	YOL047C	RRP14	P36080	434 aa	Known RBP	4.57	□□□□□ -1.68
LDS2	YOL047C	BOL3	P39724	118 aa		4.57	□□□□□ -1.68
LDS2	YOL047C	MVP1	P40959	511 aa	Known RBP	4.57	□□□□□ -1.68
LDS2	YOL047C	TCB2	P48231	1178 aa		4.57	□□□□□ -1.68
LDS2	YOL047C	CLA4	P48562	842 aa		4.57	□□□□□ -1.68
LDS2	YOL047C	FRT1	Q99332	602 aa		4.57	□□□□□ -1.68
LDS2	YOL047C	SPT6	P23615	1451 aa	Known RBP	4.56	□□□□□ -1.68
LDS2	YOL047C	SPT7	P35177	1332 aa		4.56	□□□□□ -1.68
LDS2	YOL047C	MAK16	P10962	306 aa	Predicted RBP	4.56	□□□□□ -1.68
LDS2	YOL047C	GAL2	P13181	574 aa		4.55	□□□□□ -1.68
LDS2	YOL047C	MET22	P32179	357 aa		4.55	□□□□□ -1.68
LDS2	YOL047C	PPX1	P38698	397 aa		4.55	□□□□□ -1.68
LDS2	YOL047C	MDG1	P53885	366 aa		4.55	□□□□□ -1.68
LDS2	YOL047C	CWC15	Q03772	175 aa	Known RBP	4.55	□□□□□ -1.68
LDS2	YOL047C	YPR109W	Q06104	294 aa		4.55	□□□□□ -1.68
LDS2	YOL047C	NUT2	Q06213	157 aa		4.55	□□□□□ -1.68
LDS2	YOL047C	MNL2	Q12205	849 aa		4.55	□□□□□ -1.68
LDS2	YOL047C	STU1	P38198	1513 aa		4.55	□□□□□ -1.68
LDS2	YOL047C	GLO3	P38682	493 aa	Known RBP	4.54	□□□□□ -1.68
LDS2	YOL047C	PMC1	P38929	1173 aa	Predicted RBP	4.54	□□□□□ -1.68
LDS2	YOL047C	OSW7	P43611	510 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms