RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C RPC82P32349 654 aa3.87□□□□□ -1.79
SQS1YNL224C LAM1P38851 1228 aa3.87□□□□□ -1.79
SQS1YNL224C CST6P40535 587 aa3.87□□□□□ -1.79
SQS1YNL224C ELA1P53861 379 aaPredicted RBP3.87□□□□□ -1.79
SQS1YNL224C SEN54Q02825 467 aaPredicted RBP3.87□□□□□ -1.79
SQS1YNL224C TMA64Q04600 565 aaKnown RBP3.87□□□□□ -1.79
SQS1YNL224C GGA1Q06336 557 aa3.87□□□□□ -1.79
SQS1YNL224C TY4B-PA0A0B7P3V8 1104 aa3.87□□□□□ -1.79
SQS1YNL224C STE5P32917 917 aa3.87□□□□□ -1.79
SQS1YNL224C NOC2P39744 710 aaKnown RBP3.87□□□□□ -1.79
SQS1YNL224C PAP2P53632 584 aaKnown RBP3.87□□□□□ -1.79
SQS1YNL224C TY4A-HQ6Q5P6 413 aa3.87□□□□□ -1.79
SQS1YNL224C NPR3P38742 1146 aa3.86□□□□□ -1.79
SQS1YNL224C YHR218WP38899 603 aa3.86□□□□□ -1.79
SQS1YNL224C RAD26P40352 1085 aa3.86□□□□□ -1.79
SQS1YNL224C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SQS1YNL224C CLC1P17891 233 aa3.86□□□□□ -1.79
SQS1YNL224C UGA3P26370 528 aa3.86□□□□□ -1.79
SQS1YNL224C BDF1P35817 686 aa3.86□□□□□ -1.79
SQS1YNL224C SGT2Q12118 346 aaKnown RBP3.86□□□□□ -1.79
SQS1YNL224C SIT4P20604 311 aa3.85□□□□□ -1.79
SQS1YNL224C CBF5P33322 483 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SQS1YNL224C BLI1P35727 113 aa3.85□□□□□ -1.79
SQS1YNL224C EPS1P40557 701 aa3.85□□□□□ -1.79
SQS1YNL224C GPI8P49018 411 aa3.85□□□□□ -1.79
SQS1YNL224C MDM1Q01846 1127 aa3.85□□□□□ -1.79
SQS1YNL224C IRC3Q06683 689 aa3.85□□□□□ -1.79
SQS1YNL224C NCR1Q12200 1170 aa3.85□□□□□ -1.79
SQS1YNL224C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SQS1YNL224C PPH3P32345 308 aa3.84□□□□□ -1.79
SQS1YNL224C CTR9P89105 1077 aa3.84□□□□□ -1.79
SQS1YNL224C PRP3Q03338 469 aaPredicted RBP3.84□□□□□ -1.79
SQS1YNL224C SPO71Q03868 1245 aa3.84□□□□□ -1.79
SQS1YNL224C RRB1Q04225 511 aaKnown RBP3.84□□□□□ -1.79
SQS1YNL224C WHI5Q12416 295 aa3.84□□□□□ -1.79
SQS1YNL224C KEX1P09620 729 aa3.84□□□□□ -1.79
SQS1YNL224C VMA1P17255 1071 aaKnown RBP3.84□□□□□ -1.79
SQS1YNL224C CLN1P20437 546 aa3.84□□□□□ -1.79
SQS1YNL224C TSR4P25040 408 aa3.84□□□□□ -1.79
SQS1YNL224C GCD6P32501 712 aaKnown RBP3.84□□□□□ -1.79
SQS1YNL224C RTG2P32608 588 aaKnown RBP3.84□□□□□ -1.79
SQS1YNL224C MFT1P33441 392 aaKnown RBP3.84□□□□□ -1.79
SQS1YNL224C PEX5P35056 612 aa3.84□□□□□ -1.79
SQS1YNL224C TAN1P53072 289 aaPredicted RBP3.84□□□□□ -1.79
SQS1YNL224C RNH70P53331 553 aa3.84□□□□□ -1.79
SQS1YNL224C MSH6Q03834 1242 aa3.84□□□□□ -1.79
SQS1YNL224C ENT2Q05785 613 aa3.84□□□□□ -1.79
SQS1YNL224C TFB4Q12004 338 aa3.84□□□□□ -1.79
SQS1YNL224C NOP58Q12499 511 aaKnown RBP3.84□□□□□ -1.79
SQS1YNL224C ACP1P32463 125 aa3.83□□□□□ -1.8
SQS1YNL224C RTG1P32607 177 aa3.83□□□□□ -1.8
SQS1YNL224C ESF2P53743 316 aaKnown RBP3.83□□□□□ -1.8
SQS1YNL224C CYB2P00175 591 aa3.83□□□□□ -1.8
SQS1YNL224C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
SQS1YNL224C EAP1P36041 632 aaKnown RBP3.83□□□□□ -1.8
SQS1YNL224C BYE1P36106 594 aa3.83□□□□□ -1.8
SQS1YNL224C FUI1P38196 639 aa3.83□□□□□ -1.8
SQS1YNL224C VHR2P40041 505 aa3.83□□□□□ -1.8
SQS1YNL224C NSE3Q05541 303 aa3.83□□□□□ -1.8
SQS1YNL224C PHM6Q05637 104 aa3.83□□□□□ -1.8
SQS1YNL224C RRP15Q06511 250 aaPredicted RBP3.83□□□□□ -1.8
SQS1YNL224C APC5Q08683 685 aa3.83□□□□□ -1.8
SQS1YNL224C NKP1Q12493 238 aa3.83□□□□□ -1.8
SQS1YNL224C PET123P17558 318 aa3.82□□□□□ -1.8
SQS1YNL224C POL4P25615 582 aa3.82□□□□□ -1.8
SQS1YNL224C ARC19P33204 171 aaKnown RBP3.82□□□□□ -1.8
SQS1YNL224C ATG19P35193 415 aa3.82□□□□□ -1.8
SQS1YNL224C GLO3P38682 493 aaKnown RBP3.82□□□□□ -1.8
SQS1YNL224C APL6P46682 809 aa3.82□□□□□ -1.8
SQS1YNL224C GYP7P48365 746 aa3.82□□□□□ -1.8
SQS1YNL224C SRP1Q02821 542 aaKnown RBP3.82□□□□□ -1.8
SQS1YNL224C UTP4Q06679 776 aaKnown RBP3.82□□□□□ -1.8
SQS1YNL224C RUD3Q12234 484 aaKnown RBP3.82□□□□□ -1.8
SQS1YNL224C KIN1P13185 1064 aa3.82□□□□□ -1.8
SQS1YNL224C SPT5P27692 1063 aaKnown RBP3.82□□□□□ -1.8
SQS1YNL224C BRF1P29056 596 aa3.82□□□□□ -1.8
SQS1YNL224C GRX4P32642 244 aa3.82□□□□□ -1.8
SQS1YNL224C MAM1P40065 302 aa3.82□□□□□ -1.8
SQS1YNL224C IES1P43579 692 aa3.82□□□□□ -1.8
SQS1YNL224C CWH41P53008 833 aa3.82□□□□□ -1.8
SQS1YNL224C VTI1Q04338 217 aa3.82□□□□□ -1.8
SQS1YNL224C BMS1Q08965 1183 aaKnown RBP3.82□□□□□ -1.8
SQS1YNL224C CDC31P06704 161 aaKnown RBP3.81□□□□□ -1.8
SQS1YNL224C TPM1P17536 199 aaKnown RBP3.81□□□□□ -1.8
SQS1YNL224C PEP12P32854 288 aa3.81□□□□□ -1.8
SQS1YNL224C TFG1P41895 735 aaPredicted RBP3.81□□□□□ -1.8
SQS1YNL224C ARB1P40024 610 aaKnown RBP3.81□□□□□ -1.8
SQS1YNL224C HUL5P53119 910 aa3.81□□□□□ -1.8
SQS1YNL224C APC2Q12440 853 aa3.81□□□□□ -1.8
SQS1YNL224C NOP14Q99207 810 aaKnown RBP3.81□□□□□ -1.8
SQS1YNL224C MAK16P10962 306 aaPredicted RBP3.8□□□□□ -1.8
SQS1YNL224C MSM1P22438 575 aa3.8□□□□□ -1.8
SQS1YNL224C SWI3P32591 825 aa3.8□□□□□ -1.8
SQS1YNL224C TTI1P36097 1038 aa3.8□□□□□ -1.8
SQS1YNL224C BDP1P46678 594 aa3.8□□□□□ -1.8
SQS1YNL224C PUS1Q12211 544 aaKnown RBP3.8□□□□□ -1.8
SQS1YNL224C GLE1Q12315 538 aa3.8□□□□□ -1.8
SQS1YNL224C TRS33Q99394 268 aa3.8□□□□□ -1.8
SQS1YNL224C SSB1P11484 613 aaKnown RBP3.79□□□□□ -1.8
SQS1YNL224C KAR1P11927 433 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms