RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C RPC82P32349 654 aa3.87□□□□□ -1.79
SQS1YNL224C LAM1P38851 1228 aa3.87□□□□□ -1.79
SQS1YNL224C CST6P40535 587 aa3.87□□□□□ -1.79
SQS1YNL224C ELA1P53861 379 aaPredicted RBP3.87□□□□□ -1.79
SQS1YNL224C SEN54Q02825 467 aaPredicted RBP3.87□□□□□ -1.79
SQS1YNL224C TMA64Q04600 565 aaKnown RBP3.87□□□□□ -1.79
SQS1YNL224C GGA1Q06336 557 aa3.87□□□□□ -1.79
SQS1YNL224C TY4B-PA0A0B7P3V8 1104 aa3.87□□□□□ -1.79
SQS1YNL224C STE5P32917 917 aa3.87□□□□□ -1.79
SQS1YNL224C NOC2P39744 710 aaKnown RBP3.87□□□□□ -1.79
SQS1YNL224C PAP2P53632 584 aaKnown RBP3.87□□□□□ -1.79
SQS1YNL224C TY4A-HQ6Q5P6 413 aa3.87□□□□□ -1.79
SQS1YNL224C NPR3P38742 1146 aa3.86□□□□□ -1.79
SQS1YNL224C YHR218WP38899 603 aa3.86□□□□□ -1.79
SQS1YNL224C RAD26P40352 1085 aa3.86□□□□□ -1.79
SQS1YNL224C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SQS1YNL224C CLC1P17891 233 aa3.86□□□□□ -1.79
SQS1YNL224C UGA3P26370 528 aa3.86□□□□□ -1.79
SQS1YNL224C BDF1P35817 686 aa3.86□□□□□ -1.79
SQS1YNL224C SGT2Q12118 346 aaKnown RBP3.86□□□□□ -1.79
SQS1YNL224C SIT4P20604 311 aa3.85□□□□□ -1.79
SQS1YNL224C CBF5P33322 483 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SQS1YNL224C BLI1P35727 113 aa3.85□□□□□ -1.79
SQS1YNL224C EPS1P40557 701 aa3.85□□□□□ -1.79
SQS1YNL224C GPI8P49018 411 aa3.85□□□□□ -1.79
SQS1YNL224C MDM1Q01846 1127 aa3.85□□□□□ -1.79
SQS1YNL224C IRC3Q06683 689 aa3.85□□□□□ -1.79
SQS1YNL224C NCR1Q12200 1170 aa3.85□□□□□ -1.79
SQS1YNL224C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SQS1YNL224C PPH3P32345 308 aa3.84□□□□□ -1.79
SQS1YNL224C CTR9P89105 1077 aa3.84□□□□□ -1.79
SQS1YNL224C PRP3Q03338 469 aaPredicted RBP3.84□□□□□ -1.79
SQS1YNL224C SPO71Q03868 1245 aa3.84□□□□□ -1.79
SQS1YNL224C RRB1Q04225 511 aaKnown RBP3.84□□□□□ -1.79
SQS1YNL224C WHI5Q12416 295 aa3.84□□□□□ -1.79
SQS1YNL224C KEX1P09620 729 aa3.84□□□□□ -1.79
SQS1YNL224C VMA1P17255 1071 aaKnown RBP3.84□□□□□ -1.79
SQS1YNL224C CLN1P20437 546 aa3.84□□□□□ -1.79
SQS1YNL224C TSR4P25040 408 aa3.84□□□□□ -1.79
SQS1YNL224C GCD6P32501 712 aaKnown RBP3.84□□□□□ -1.79
SQS1YNL224C RTG2P32608 588 aaKnown RBP3.84□□□□□ -1.79
SQS1YNL224C MFT1P33441 392 aaKnown RBP3.84□□□□□ -1.79
SQS1YNL224C PEX5P35056 612 aa3.84□□□□□ -1.79
SQS1YNL224C TAN1P53072 289 aaPredicted RBP3.84□□□□□ -1.79
SQS1YNL224C RNH70P53331 553 aa3.84□□□□□ -1.79
SQS1YNL224C MSH6Q03834 1242 aa3.84□□□□□ -1.79
SQS1YNL224C ENT2Q05785 613 aa3.84□□□□□ -1.79
SQS1YNL224C TFB4Q12004 338 aa3.84□□□□□ -1.79
SQS1YNL224C NOP58Q12499 511 aaKnown RBP3.84□□□□□ -1.79
SQS1YNL224C ACP1P32463 125 aa3.83□□□□□ -1.8
SQS1YNL224C RTG1P32607 177 aa3.83□□□□□ -1.8
SQS1YNL224C ESF2P53743 316 aaKnown RBP3.83□□□□□ -1.8
SQS1YNL224C CYB2P00175 591 aa3.83□□□□□ -1.8
SQS1YNL224C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
SQS1YNL224C EAP1P36041 632 aaKnown RBP3.83□□□□□ -1.8
SQS1YNL224C BYE1P36106 594 aa3.83□□□□□ -1.8
SQS1YNL224C FUI1P38196 639 aa3.83□□□□□ -1.8
SQS1YNL224C VHR2P40041 505 aa3.83□□□□□ -1.8
SQS1YNL224C NSE3Q05541 303 aa3.83□□□□□ -1.8
SQS1YNL224C PHM6Q05637 104 aa3.83□□□□□ -1.8
SQS1YNL224C RRP15Q06511 250 aaPredicted RBP3.83□□□□□ -1.8
SQS1YNL224C APC5Q08683 685 aa3.83□□□□□ -1.8
SQS1YNL224C NKP1Q12493 238 aa3.83□□□□□ -1.8
SQS1YNL224C PET123P17558 318 aa3.82□□□□□ -1.8
SQS1YNL224C POL4P25615 582 aa3.82□□□□□ -1.8
SQS1YNL224C ARC19P33204 171 aaKnown RBP3.82□□□□□ -1.8
SQS1YNL224C ATG19P35193 415 aa3.82□□□□□ -1.8
SQS1YNL224C GLO3P38682 493 aaKnown RBP3.82□□□□□ -1.8
SQS1YNL224C APL6P46682 809 aa3.82□□□□□ -1.8
SQS1YNL224C GYP7P48365 746 aa3.82□□□□□ -1.8
SQS1YNL224C SRP1Q02821 542 aaKnown RBP3.82□□□□□ -1.8
SQS1YNL224C UTP4Q06679 776 aaKnown RBP3.82□□□□□ -1.8
SQS1YNL224C RUD3Q12234 484 aaKnown RBP3.82□□□□□ -1.8
SQS1YNL224C KIN1P13185 1064 aa3.82□□□□□ -1.8
SQS1YNL224C SPT5P27692 1063 aaKnown RBP3.82□□□□□ -1.8
SQS1YNL224C BRF1P29056 596 aa3.82□□□□□ -1.8
SQS1YNL224C GRX4P32642 244 aa3.82□□□□□ -1.8
SQS1YNL224C MAM1P40065 302 aa3.82□□□□□ -1.8
SQS1YNL224C IES1P43579 692 aa3.82□□□□□ -1.8
SQS1YNL224C CWH41P53008 833 aa3.82□□□□□ -1.8
SQS1YNL224C VTI1Q04338 217 aa3.82□□□□□ -1.8
SQS1YNL224C BMS1Q08965 1183 aaKnown RBP3.82□□□□□ -1.8
SQS1YNL224C CDC31P06704 161 aaKnown RBP3.81□□□□□ -1.8
SQS1YNL224C TPM1P17536 199 aaKnown RBP3.81□□□□□ -1.8
SQS1YNL224C PEP12P32854 288 aa3.81□□□□□ -1.8
SQS1YNL224C TFG1P41895 735 aaPredicted RBP3.81□□□□□ -1.8
SQS1YNL224C ARB1P40024 610 aaKnown RBP3.81□□□□□ -1.8
SQS1YNL224C HUL5P53119 910 aa3.81□□□□□ -1.8
SQS1YNL224C APC2Q12440 853 aa3.81□□□□□ -1.8
SQS1YNL224C NOP14Q99207 810 aaKnown RBP3.81□□□□□ -1.8
SQS1YNL224C MAK16P10962 306 aaPredicted RBP3.8□□□□□ -1.8
SQS1YNL224C MSM1P22438 575 aa3.8□□□□□ -1.8
SQS1YNL224C SWI3P32591 825 aa3.8□□□□□ -1.8
SQS1YNL224C TTI1P36097 1038 aa3.8□□□□□ -1.8
SQS1YNL224C BDP1P46678 594 aa3.8□□□□□ -1.8
SQS1YNL224C PUS1Q12211 544 aaKnown RBP3.8□□□□□ -1.8
SQS1YNL224C GLE1Q12315 538 aa3.8□□□□□ -1.8
SQS1YNL224C TRS33Q99394 268 aa3.8□□□□□ -1.8
SQS1YNL224C SSB1P11484 613 aaKnown RBP3.79□□□□□ -1.8
SQS1YNL224C KAR1P11927 433 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms