RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A YDJ1P25491 409 aaKnown RBP6.49□□□□□ -1.37
YSF3YNL138W-A BDP1P46678 594 aa6.49□□□□□ -1.37
YSF3YNL138W-A FRK1Q03002 865 aaPredicted RBP6.49□□□□□ -1.37
YSF3YNL138W-A RAS1P01119 309 aa6.48□□□□□ -1.37
YSF3YNL138W-A YEL077CQ3E7X8 1277 aa6.48□□□□□ -1.37
YSF3YNL138W-A TPD3P31383 635 aa6.47□□□□□ -1.37
YSF3YNL138W-A RRD1P40454 393 aaKnown RBP6.47□□□□□ -1.37
YSF3YNL138W-A PUS5Q06244 254 aa6.47□□□□□ -1.37
YSF3YNL138W-A ATG2P53855 1592 aa6.47□□□□□ -1.37
YSF3YNL138W-A TIF1P10081 395 aaKnown RBP6.46□□□□□ -1.38
YSF3YNL138W-A AMS1P22855 1083 aa6.46□□□□□ -1.38
YSF3YNL138W-A SUP45P12385 437 aaKnown RBP6.45□□□□□ -1.38
YSF3YNL138W-A FIG4P42837 879 aa6.45□□□□□ -1.38
YSF3YNL138W-A SPT5P27692 1063 aaKnown RBP6.44□□□□□ -1.38
YSF3YNL138W-A RPL34BP40525 121 aaKnown RBP6.44□□□□□ -1.38
YSF3YNL138W-A YCF1P39109 1515 aaKnown RBP6.44□□□□□ -1.38
YSF3YNL138W-A ENO2P00925 437 aaKnown RBP6.43□□□□□ -1.38
YSF3YNL138W-A NAF1P53919 492 aaKnown RBP6.43□□□□□ -1.38
YSF3YNL138W-A ITT1Q04638 464 aa6.43□□□□□ -1.38
YSF3YNL138W-A RLF2Q12495 606 aa6.43□□□□□ -1.38
YSF3YNL138W-A TEC1P18412 486 aa6.42□□□□□ -1.38
YSF3YNL138W-A VAC17P25591 423 aa6.41□□□□□ -1.38
YSF3YNL138W-A ISF1P32488 338 aa6.41□□□□□ -1.38
YSF3YNL138W-A RTG2P32608 588 aaKnown RBP6.41□□□□□ -1.38
YSF3YNL138W-A CLA4P48562 842 aa6.41□□□□□ -1.38
YSF3YNL138W-A YPR084WQ06821 456 aa6.4□□□□□ -1.38
YSF3YNL138W-A YPR204WQ08995 1032 aa6.4□□□□□ -1.38
YSF3YNL138W-A MCM16Q12262 181 aa6.4□□□□□ -1.38
YSF3YNL138W-A KIP2P28743 706 aa6.39□□□□□ -1.39
YSF3YNL138W-A GUT2P32191 649 aa6.39□□□□□ -1.39
YSF3YNL138W-A IXR1P33417 597 aa6.39□□□□□ -1.39
YSF3YNL138W-A EMP47P43555 445 aa6.38□□□□□ -1.39
YSF3YNL138W-A BNI1P41832 1953 aa6.37□□□□□ -1.39
YSF3YNL138W-A XRN1P22147 1528 aaKnown RBP6.37□□□□□ -1.39
YSF3YNL138W-A ENO1P00924 437 aaKnown RBP6.37□□□□□ -1.39
YSF3YNL138W-A RIM21P48565 533 aa6.37□□□□□ -1.39
YSF3YNL138W-A SYH1Q02875 849 aaKnown RBP6.37□□□□□ -1.39
YSF3YNL138W-A STE20Q03497 939 aaKnown RBP6.37□□□□□ -1.39
YSF3YNL138W-A MYO2P19524 1574 aaKnown RBP6.36□□□□□ -1.39
YSF3YNL138W-A FRA1Q07825 749 aa6.36□□□□□ -1.39
YSF3YNL138W-A AIR1P40507 360 aaKnown RBP6.35□□□□□ -1.39
YSF3YNL138W-A MRX10Q05648 414 aa6.35□□□□□ -1.39
YSF3YNL138W-A YPP1P46951 817 aa6.34□□□□□ -1.39
YSF3YNL138W-A HED1Q03937 162 aa6.34□□□□□ -1.39
YSF3YNL138W-A TAF2P23255 1407 aa6.33□□□□□ -1.4
YSF3YNL138W-A APP1P53933 587 aa6.33□□□□□ -1.4
YSF3YNL138W-A RDS2P19541 446 aaKnown RBP6.32□□□□□ -1.4
YSF3YNL138W-A TTI1P36097 1038 aa6.31□□□□□ -1.4
YSF3YNL138W-A MET32Q12041 191 aa6.31□□□□□ -1.4
YSF3YNL138W-A SSK2P53599 1579 aa6.31□□□□□ -1.4
YSF3YNL138W-A CPS1P27614 576 aa6.3□□□□□ -1.4
YSF3YNL138W-A ENV9Q08651 330 aa6.3□□□□□ -1.4
YSF3YNL138W-A CDC25P04821 1589 aa6.3□□□□□ -1.4
YSF3YNL138W-A EMW1P42842 904 aaKnown RBP6.29□□□□□ -1.4
YSF3YNL138W-A APL6P46682 809 aa6.29□□□□□ -1.4
YSF3YNL138W-A MRX12P47084 519 aa6.29□□□□□ -1.4
YSF3YNL138W-A RPA190P10964 1664 aaKnown RBP6.29□□□□□ -1.4
YSF3YNL138W-A CDC4P07834 779 aa6.28□□□□□ -1.4
YSF3YNL138W-A MRT4P33201 236 aaKnown RBP6.28□□□□□ -1.4
YSF3YNL138W-A SOH1P38633 127 aa6.28□□□□□ -1.4
YSF3YNL138W-A SRC1Q03707 834 aa6.28□□□□□ -1.4
YSF3YNL138W-A LTE1P07866 1435 aa6.27□□□□□ -1.41
YSF3YNL138W-A PEP12P32854 288 aa6.27□□□□□ -1.41
YSF3YNL138W-A ATG20Q07528 640 aa6.27□□□□□ -1.41
YSF3YNL138W-A KTR7P40504 517 aa6.26□□□□□ -1.41
YSF3YNL138W-A ISR1Q06098 443 aaKnown RBP6.26□□□□□ -1.41
YSF3YNL138W-A ASH1P34233 588 aa6.25□□□□□ -1.41
YSF3YNL138W-A ATG3P40344 310 aa6.25□□□□□ -1.41
YSF3YNL138W-A IRC20Q06554 1556 aa6.25□□□□□ -1.41
YSF3YNL138W-A MET5P47169 1442 aa6.25□□□□□ -1.41
YSF3YNL138W-A ESC1Q03661 1658 aaKnown RBP6.24□□□□□ -1.41
YSF3YNL138W-A TRK1P12685 1235 aa6.24□□□□□ -1.41
YSF3YNL138W-A MKS1P34072 584 aa6.24□□□□□ -1.41
YSF3YNL138W-A HAL5P38970 855 aaKnown RBP6.24□□□□□ -1.41
YSF3YNL138W-A DNF1P32660 1571 aa6.23□□□□□ -1.41
YSF3YNL138W-A YBL086CP38177 466 aa6.23□□□□□ -1.41
YSF3YNL138W-A UTP13Q05946 817 aaKnown RBP6.23□□□□□ -1.41
YSF3YNL138W-A AFT1P22149 690 aa6.22□□□□□ -1.41
YSF3YNL138W-A SSA4P22202 642 aaKnown RBP6.22□□□□□ -1.41
YSF3YNL138W-A SIS2P36024 562 aa6.22□□□□□ -1.41
YSF3YNL138W-A TGL4P36165 910 aa6.22□□□□□ -1.41
YSF3YNL138W-A HST3P53687 447 aa6.22□□□□□ -1.41
YSF3YNL138W-A DFG5Q05031 458 aa6.22□□□□□ -1.41
YSF3YNL138W-A SUB2Q07478 446 aaKnown RBP6.22□□□□□ -1.41
YSF3YNL138W-A SKI3P17883 1432 aaKnown RBP6.21□□□□□ -1.42
YSF3YNL138W-A UGA3P26370 528 aa6.2□□□□□ -1.42
YSF3YNL138W-A FBP26P32604 452 aa6.2□□□□□ -1.42
YSF3YNL138W-A ISU1Q03020 165 aa6.2□□□□□ -1.42
YSF3YNL138W-A MIP1P15801 1254 aa6.19□□□□□ -1.42
YSF3YNL138W-A PUP1P25043 261 aa6.19□□□□□ -1.42
YSF3YNL138W-A NOB1Q08444 459 aaKnown RBP6.19□□□□□ -1.42
YSF3YNL138W-A CBC2Q08920 208 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42 RIP-Chip
YSF3YNL138W-A STE6P12866 1290 aa6.18□□□□□ -1.42
YSF3YNL138W-A MSB3P48566 633 aaPredicted RBP6.18□□□□□ -1.42
YSF3YNL138W-A ECM23Q02710 187 aa6.18□□□□□ -1.42
YSF3YNL138W-A YML083CQ04526 418 aa6.18□□□□□ -1.42
YSF3YNL138W-A HDA3Q06623 655 aa6.18□□□□□ -1.42
YSF3YNL138W-A BDS1Q08347 646 aa6.17□□□□□ -1.42
YSF3YNL138W-A RKR1Q04781 1562 aa6.17□□□□□ -1.42
YSF3YNL138W-A RPO31P04051 1460 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms