RNA–Protein interactions for RNA: YMR277W

FCP1, Transcript of Carboxy-terminal domain (CTD) phosphatase, yeastyeast

Gene FCP1, Length 2,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FCP1YMR277W AUS1Q08409 1394 aa8.66□□□□□ -1.02
FCP1YMR277W VPS27P40343 622 aaKnown RBP8.66□□□□□ -1.02
FCP1YMR277W RVB2Q12464 471 aaKnown RBP8.66□□□□□ -1.02
FCP1YMR277W MIF2P35201 549 aa8.65□□□□□ -1.02
FCP1YMR277W RTR1P40084 226 aaPredicted RBP8.65□□□□□ -1.02
FCP1YMR277W YPP1P46951 817 aa8.65□□□□□ -1.02
FCP1YMR277W RTF1P53064 558 aa8.65□□□□□ -1.02
FCP1YMR277W CDC45Q08032 650 aa8.64□□□□□ -1.03
FCP1YMR277W RPP0P05317 312 aaKnown RBP8.63□□□□□ -1.03
FCP1YMR277W ADE6P38972 1358 aaKnown RBP8.63□□□□□ -1.03
FCP1YMR277W DPS1P04802 557 aaKnown RBP8.63□□□□□ -1.03
FCP1YMR277W SUI2P20459 304 aaKnown RBP8.63□□□□□ -1.03
FCP1YMR277W DJP1P40564 432 aa8.63□□□□□ -1.03
FCP1YMR277W YNL011CP53980 444 aa8.63□□□□□ -1.03
FCP1YMR277W PRP43P53131 767 aaKnown RBP8.62□□□□□ -1.03
FCP1YMR277W NOT3P06102 836 aaKnown RBP8.62□□□□□ -1.03
FCP1YMR277W GRX4P32642 244 aa8.62□□□□□ -1.03
FCP1YMR277W IOC4Q04213 475 aa8.62□□□□□ -1.03
FCP1YMR277W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
FCP1YMR277W PIL1P53252 339 aaKnown RBP8.61□□□□□ -1.03
FCP1YMR277W SWE1P32944 819 aa8.6□□□□□ -1.03
FCP1YMR277W MSH4P40965 878 aaPredicted RBP8.6□□□□□ -1.03
FCP1YMR277W EDE1P34216 1381 aa8.6□□□□□ -1.03
FCP1YMR277W PRD1P25375 712 aa8.59□□□□□ -1.03
FCP1YMR277W SAP155P43612 1002 aa8.59□□□□□ -1.03
FCP1YMR277W THI22Q06490 572 aa8.59□□□□□ -1.03
FCP1YMR277W VPS4P52917 437 aa8.58□□□□□ -1.04
FCP1YMR277W TPD3P31383 635 aa8.58□□□□□ -1.04
FCP1YMR277W DOS2P54858 310 aa8.56□□□□□ -1.04
FCP1YMR277W PCT1P13259 424 aa8.56□□□□□ -1.04
FCP1YMR277W PRP45P28004 379 aaPredicted RBP8.56□□□□□ -1.04
FCP1YMR277W MSH3P25336 1018 aa8.55□□□□□ -1.04
FCP1YMR277W DSN1P40568 576 aa8.55□□□□□ -1.04
FCP1YMR277W PRP5P21372 849 aaPredicted RBP8.55□□□□□ -1.04
FCP1YMR277W BCH2P36122 765 aa8.55□□□□□ -1.04
FCP1YMR277W PRP3Q03338 469 aaPredicted RBP8.55□□□□□ -1.04
FCP1YMR277W RTT109Q07794 436 aa8.55□□□□□ -1.04
FCP1YMR277W SNF2P22082 1703 aa8.54□□□□□ -1.04
FCP1YMR277W CLB5P30283 435 aa8.54□□□□□ -1.04
FCP1YMR277W YGL015CP33199 130 aa8.54□□□□□ -1.04
FCP1YMR277W MAP2P38174 421 aaKnown RBP8.54□□□□□ -1.04
FCP1YMR277W SIC1P38634 284 aa8.54□□□□□ -1.04
FCP1YMR277W RLP24Q07915 199 aaKnown RBP8.54□□□□□ -1.04
FCP1YMR277W RPO41P13433 1351 aaKnown RBP8.54□□□□□ -1.04
FCP1YMR277W VPS24P36095 224 aaKnown RBP8.54□□□□□ -1.04
FCP1YMR277W RPN1P38764 993 aaKnown RBP8.54□□□□□ -1.04
FCP1YMR277W NNF2P53253 936 aa8.54□□□□□ -1.04
FCP1YMR277W MSP1P28737 362 aa8.53□□□□□ -1.04
FCP1YMR277W AKL1P38080 1108 aaKnown RBP8.53□□□□□ -1.04
FCP1YMR277W MSB3P48566 633 aaPredicted RBP8.53□□□□□ -1.04
FCP1YMR277W HEF3P53978 1044 aaKnown RBP8.53□□□□□ -1.04
FCP1YMR277W ETT1Q08421 412 aaKnown RBP8.53□□□□□ -1.04
FCP1YMR277W ARL1P38116 183 aaKnown RBP8.52□□□□□ -1.04
FCP1YMR277W KNS1P32350 737 aaPredicted RBP8.51□□□□□ -1.05
FCP1YMR277W PTP3P40048 928 aa8.51□□□□□ -1.05
FCP1YMR277W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
FCP1YMR277W DAL5P15365 543 aa8.5□□□□□ -1.05
FCP1YMR277W BYE1P36106 594 aa8.5□□□□□ -1.05
FCP1YMR277W DSD1P53095 428 aa8.5□□□□□ -1.05
FCP1YMR277W SLM3Q12093 417 aa8.5□□□□□ -1.05
FCP1YMR277W LTV1P34078 463 aa8.49□□□□□ -1.05
FCP1YMR277W GRX3Q03835 250 aa8.49□□□□□ -1.05
FCP1YMR277W TY4B-HP0C2J7 1802 aa8.49□□□□□ -1.05
FCP1YMR277W TY4B-JP47024 1803 aa8.49□□□□□ -1.05
FCP1YMR277W HSP104P31539 908 aaKnown RBP8.48□□□□□ -1.05
FCP1YMR277W TPM2P40414 161 aa8.48□□□□□ -1.05
FCP1YMR277W YRF1-4O13559 1382 aa8.47□□□□□ -1.05
FCP1YMR277W MED8P38304 223 aa8.47□□□□□ -1.05
FCP1YMR277W YFR006WP43590 535 aa8.47□□□□□ -1.05
FCP1YMR277W TAN1P53072 289 aaPredicted RBP8.47□□□□□ -1.05
FCP1YMR277W YAH1Q12184 172 aaKnown RBP8.47□□□□□ -1.05
FCP1YMR277W NTH2P35172 780 aa8.46□□□□□ -1.05
FCP1YMR277W RAD2P07276 1031 aa8.46□□□□□ -1.06
FCP1YMR277W YBR287WP38355 427 aa8.46□□□□□ -1.06
FCP1YMR277W YIL092WP40497 633 aa8.46□□□□□ -1.06
FCP1YMR277W BMS1Q08965 1183 aaKnown RBP8.46□□□□□ -1.06
FCP1YMR277W ECM1P39715 212 aa8.45□□□□□ -1.06
FCP1YMR277W RRT14P40470 206 aa8.45□□□□□ -1.06
FCP1YMR277W ECM16Q04217 1267 aaKnown RBP8.45□□□□□ -1.06
FCP1YMR277W TCB1Q12466 1186 aa8.45□□□□□ -1.06
FCP1YMR277W CBF5P33322 483 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
FCP1YMR277W XKS1P42826 600 aa8.45□□□□□ -1.06
FCP1YMR277W RPN7Q06103 429 aaKnown RBP8.45□□□□□ -1.06
FCP1YMR277W CLB1P24868 471 aa8.44□□□□□ -1.06
FCP1YMR277W YNL050CP53952 270 aa8.44□□□□□ -1.06
FCP1YMR277W RCR1P38212 213 aa8.44□□□□□ -1.06
FCP1YMR277W ZDS1P50111 915 aaKnown RBP8.44□□□□□ -1.06
FCP1YMR277W YLR271WQ06152 274 aa8.44□□□□□ -1.06
FCP1YMR277W ENT1Q12518 454 aa8.44□□□□□ -1.06
FCP1YMR277W YIL177CP40434 1758 aa8.43□□□□□ -1.06
FCP1YMR277W YJL225CP40889 1758 aa8.43□□□□□ -1.06
FCP1YMR277W TCD1P38756 429 aa8.43□□□□□ -1.06
FCP1YMR277W YRF1-2P40105 1681 aa8.43□□□□□ -1.06
FCP1YMR277W CIN4P39110 191 aa8.42□□□□□ -1.06
FCP1YMR277W UBP10P53874 792 aaPredicted RBP8.42□□□□□ -1.06
FCP1YMR277W APP1P53933 587 aa8.42□□□□□ -1.06
FCP1YMR277W VPS60Q03390 229 aa8.42□□□□□ -1.06
FCP1YMR277W NOP8Q08287 484 aaPredicted RBP8.42□□□□□ -1.06
FCP1YMR277W RRP5Q05022 1729 aaKnown RBP8.42□□□□□ -1.06
FCP1YMR277W SRP54P20424 541 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms