RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W SCJ1P25303 377 aa2.63□□□□□ -1.99
RTP1YMR185W NUP42P49686 430 aaKnown RBP2.63□□□□□ -1.99
RTP1YMR185W PUS6P53294 404 aa2.63□□□□□ -1.99
RTP1YMR185W TAF2P23255 1407 aa2.62□□□□□ -1.99
RTP1YMR185W TRM1P15565 570 aaKnown RBP2.62□□□□□ -1.99
RTP1YMR185W CAF120P53836 1060 aa2.62□□□□□ -1.99
RTP1YMR185W MMP1Q12372 583 aa2.62□□□□□ -1.99
RTP1YMR185W ATG2P53855 1592 aa2.62□□□□□ -1.99
RTP1YMR185W SIT4P20604 311 aa2.62□□□□□ -1.99
RTP1YMR185W PTK2P47116 818 aaKnown RBP2.62□□□□□ -1.99
RTP1YMR185W YOR1P53049 1477 aa2.61□□□□□ -1.99
RTP1YMR185W ESS1P22696 170 aa2.61□□□□□ -1.99
RTP1YMR185W RPA14P50106 137 aa2.61□□□□□ -1.99
RTP1YMR185W GLN1P32288 370 aaKnown RBP2.61□□□□□ -1.99
RTP1YMR185W DNA2P38859 1522 aa2.61□□□□□ -1.99
RTP1YMR185W BUD4P47136 1447 aa2.61□□□□□ -1.99
RTP1YMR185W GLC3P32775 704 aa2.6□□□□□ -1.99
RTP1YMR185W SPP41P38904 1435 aa2.6□□□□□ -1.99
RTP1YMR185W MSB3P48566 633 aaPredicted RBP2.6□□□□□ -1.99
RTP1YMR185W PKH3Q03306 898 aaPredicted RBP2.59□□□□□ -1.99
RTP1YMR185W TRM732Q03496 1420 aa2.59□□□□□ -1.99
RTP1YMR185W RKR1Q04781 1562 aa2.59□□□□□ -1.99
RTP1YMR185W YPR097WQ06839 1073 aa2.59□□□□□ -1.99
RTP1YMR185W SAS10Q12136 610 aaPredicted RBP2.59□□□□□ -1.99
RTP1YMR185W IKI3Q06706 1349 aaKnown RBP2.59□□□□□ -2
RTP1YMR185W SMC4Q12267 1418 aa2.59□□□□□ -2
RTP1YMR185W ARG8P18544 423 aa2.58□□□□□ -2
RTP1YMR185W SCW11P53189 542 aa2.58□□□□□ -2
RTP1YMR185W YGR035CP53222 116 aa2.58□□□□□ -2
RTP1YMR185W HST2P53686 357 aa2.58□□□□□ -2
RTP1YMR185W OPT2Q06593 877 aa2.58□□□□□ -2
RTP1YMR185W BPT1P14772 1559 aa2.58□□□□□ -2
RTP1YMR185W RPO31P04051 1460 aa2.58□□□□□ -2
RTP1YMR185W ARG82P07250 355 aa2.58□□□□□ -2
RTP1YMR185W MIP1P15801 1254 aa2.58□□□□□ -2
RTP1YMR185W PEP1P32319 1579 aa2.58□□□□□ -2
RTP1YMR185W SCC2Q04002 1493 aa2.58□□□□□ -2
RTP1YMR185W TY1B-DR3Q99231 1755 aa2.58□□□□□ -2
RTP1YMR185W APP1P53933 587 aa2.58□□□□□ -2
RTP1YMR185W MLP2P40457 1679 aa2.57□□□□□ -2
RTP1YMR185W YJU3P28321 313 aa2.57□□□□□ -2
RTP1YMR185W TPD3P31383 635 aa2.57□□□□□ -2
RTP1YMR185W TY2B-LR1P0C2J3 1770 aa2.57□□□□□ -2
RTP1YMR185W TY2B-FP0CX63 1770 aa2.57□□□□□ -2
RTP1YMR185W TY2B-GR2P0CX64 1770 aa2.57□□□□□ -2
RTP1YMR185W TY2B-CP25384 1770 aa2.57□□□□□ -2
RTP1YMR185W TY2B-DR2Q03494 1770 aa2.57□□□□□ -2
RTP1YMR185W TY1B-DR1Q03855 1755 aa2.57□□□□□ -2
RTP1YMR185W TY2B-DR3Q07791 1770 aaKnown RBP2.57□□□□□ -2
RTP1YMR185W TY2B-OR1Q12113 1770 aa2.57□□□□□ -2
RTP1YMR185W TY2B-DR1Q12472 1770 aa2.57□□□□□ -2
RTP1YMR185W TY2B-OR2Q12501 1770 aa2.57□□□□□ -2
RTP1YMR185W NUP85P46673 744 aa2.57□□□□□ -2
RTP1YMR185W LSC2P53312 427 aa2.57□□□□□ -2
RTP1YMR185W DLD1P32891 587 aa2.56□□□□□ -2
RTP1YMR185W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
RTP1YMR185W ITT1Q04638 464 aa2.56□□□□□ -2
RTP1YMR185W YDL176WQ12027 708 aa2.56□□□□□ -2
RTP1YMR185W TOP2P06786 1428 aaKnown RBP2.56□□□□□ -2
RTP1YMR185W SNQ2P32568 1501 aaKnown RBP2.56□□□□□ -2
RTP1YMR185W KOG1P38873 1557 aa2.56□□□□□ -2
RTP1YMR185W TY2B-BQ12491 1770 aa2.55□□□□□ -2
RTP1YMR185W YCF1P39109 1515 aaKnown RBP2.55□□□□□ -2
RTP1YMR185W MKS1P34072 584 aa2.55□□□□□ -2
RTP1YMR185W TAF7Q05021 590 aa2.55□□□□□ -2
RTP1YMR185W GLY1P37303 387 aaKnown RBP2.55□□□□□ -2
RTP1YMR185W YNR021WP53723 404 aaKnown RBP2.55□□□□□ -2
RTP1YMR185W ULS1Q08562 1619 aa2.54□□□□□ -2
RTP1YMR185W YIR007WP40566 764 aa2.54□□□□□ -2
RTP1YMR185W NOP2P40991 618 aaKnown RBP2.54□□□□□ -2
RTP1YMR185W AAD14P42884 376 aa2.54□□□□□ -2
RTP1YMR185W DFG5Q05031 458 aa2.54□□□□□ -2
RTP1YMR185W UBP2Q01476 1272 aa2.54□□□□□ -2
RTP1YMR185W TY1B-HO13535 1793 aa2.54□□□□□ -2
RTP1YMR185W TY1B-DR5P0C2I2 1755 aa2.54□□□□□ -2
RTP1YMR185W TY1B-DR6P0C2I3 1755 aa2.54□□□□□ -2
RTP1YMR185W TY1B-LR2P0C2I5 1755 aa2.54□□□□□ -2
RTP1YMR185W TY1B-LR3P0C2I6 1755 aaKnown RBP2.54□□□□□ -2
RTP1YMR185W TY1B-PR1P0C2I9 1755 aaKnown RBP2.54□□□□□ -2
RTP1YMR185W TY1B-PR2P0C2J0 1756 aa2.54□□□□□ -2
RTP1YMR185W TY1B-PR3P0C2J1 1755 aaKnown RBP2.54□□□□□ -2
RTP1YMR185W TY1B-JR1P47098 1755 aa2.54□□□□□ -2
RTP1YMR185W TY1B-ML2Q03434 1755 aaKnown RBP2.54□□□□□ -2
RTP1YMR185W TY1B-ER1Q03612 1755 aa2.54□□□□□ -2
RTP1YMR185W TY1B-ML1Q04711 1755 aaKnown RBP2.54□□□□□ -2
RTP1YMR185W TY1B-GR2Q12269 1755 aa2.54□□□□□ -2
RTP1YMR185W TY1B-OLQ12273 1755 aa2.54□□□□□ -2
RTP1YMR185W TY1B-PLQ12414 1755 aaKnown RBP2.54□□□□□ -2
RTP1YMR185W MRT4P33201 236 aaKnown RBP2.53□□□□□ -2
RTP1YMR185W CSN12P47130 423 aa2.53□□□□□ -2
RTP1YMR185W TCB1Q12466 1186 aa2.53□□□□□ -2
RTP1YMR185W PDR10P51533 1564 aa2.53□□□□□ -2
RTP1YMR185W VAC17P25591 423 aa2.52□□□□□ -2.01
RTP1YMR185W TY1B-BRQ12193 1756 aa2.52□□□□□ -2.01
RTP1YMR185W TY1B-GR3Q12316 1755 aa2.52□□□□□ -2.01
RTP1YMR185W TY1B-ORQ92393 1755 aa2.52□□□□□ -2.01
RTP1YMR185W PDR15Q04182 1529 aaKnown RBP2.52□□□□□ -2.01
RTP1YMR185W ESC1Q03661 1658 aaKnown RBP2.52□□□□□ -2.01
RTP1YMR185W ACO2P39533 789 aa2.52□□□□□ -2.01
RTP1YMR185W RTT106P40161 455 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms