RNA–Protein interactions for RNA: YLR228C

ECM22, Transcript of Sterol regulatory element binding protein, yeastyeast

Gene ECM22, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM22YLR228C PRP3Q03338 469 aaPredicted RBP4.78□□□□□ -1.64
ECM22YLR228C TSC11P40061 1430 aa4.78□□□□□ -1.64
ECM22YLR228C POL1P13382 1468 aa4.78□□□□□ -1.64
ECM22YLR228C BCK1Q01389 1478 aa4.78□□□□□ -1.64
ECM22YLR228C CLB1P24868 471 aa4.78□□□□□ -1.64
ECM22YLR228C NST1P53935 1240 aa4.78□□□□□ -1.64
ECM22YLR228C PDS5Q04264 1277 aa4.78□□□□□ -1.64
ECM22YLR228C ETT1Q08421 412 aaKnown RBP4.78□□□□□ -1.64
ECM22YLR228C TEA1P47988 759 aa4.77□□□□□ -1.65
ECM22YLR228C NNF2P53253 936 aa4.77□□□□□ -1.65
ECM22YLR228C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
ECM22YLR228C USO1P25386 1790 aa4.77□□□□□ -1.65
ECM22YLR228C SPB4P25808 606 aaPredicted RBP4.77□□□□□ -1.65
ECM22YLR228C DEP1P31385 405 aa4.77□□□□□ -1.65
ECM22YLR228C PRE3P38624 215 aa4.77□□□□□ -1.65
ECM22YLR228C PIL1P53252 339 aaKnown RBP4.77□□□□□ -1.65
ECM22YLR228C GRX3Q03835 250 aa4.77□□□□□ -1.65
ECM22YLR228C ESC2Q06340 456 aa4.77□□□□□ -1.65
ECM22YLR228C BMS1Q08965 1183 aaKnown RBP4.77□□□□□ -1.65
ECM22YLR228C PLP2Q12017 286 aa4.77□□□□□ -1.65
ECM22YLR228C IML1P47170 1584 aa4.77□□□□□ -1.65
ECM22YLR228C TY1B-DR3Q99231 1755 aa4.77□□□□□ -1.65
ECM22YLR228C MED8P38304 223 aa4.76□□□□□ -1.65
ECM22YLR228C VPS4P52917 437 aa4.76□□□□□ -1.65
ECM22YLR228C LTV1P34078 463 aa4.76□□□□□ -1.65
ECM22YLR228C YDL129WQ07555 291 aa4.76□□□□□ -1.65
ECM22YLR228C RPN1P38764 993 aaKnown RBP4.75□□□□□ -1.65
ECM22YLR228C ECM1P39715 212 aa4.75□□□□□ -1.65
ECM22YLR228C MDG1P53885 366 aa4.75□□□□□ -1.65
ECM22YLR228C RLP24Q07915 199 aaKnown RBP4.75□□□□□ -1.65
ECM22YLR228C XDJ1P39102 459 aa4.75□□□□□ -1.65
ECM22YLR228C NOP7P53261 605 aaKnown RBP4.75□□□□□ -1.65
ECM22YLR228C JIP4Q03361 876 aa4.75□□□□□ -1.65
ECM22YLR228C LCD1Q04377 747 aa4.75□□□□□ -1.65
ECM22YLR228C MLP2P40457 1679 aa4.74□□□□□ -1.65
ECM22YLR228C MRM1P25270 412 aa4.74□□□□□ -1.65
ECM22YLR228C TCD1P38756 429 aa4.74□□□□□ -1.65
ECM22YLR228C RSC1P53236 928 aa4.74□□□□□ -1.65
ECM22YLR228C VPS60Q03390 229 aa4.74□□□□□ -1.65
ECM22YLR228C ECM16Q04217 1267 aaKnown RBP4.74□□□□□ -1.65
ECM22YLR228C ENV9Q08651 330 aa4.74□□□□□ -1.65
ECM22YLR228C NOP14Q99207 810 aaKnown RBP4.74□□□□□ -1.65
ECM22YLR228C GEA1P47102 1408 aaPredicted RBP4.74□□□□□ -1.65
ECM22YLR228C IQG1Q12280 1495 aa4.74□□□□□ -1.65
ECM22YLR228C YRF1-2P40105 1681 aa4.74□□□□□ -1.65
ECM22YLR228C UTP13Q05946 817 aaKnown RBP4.74□□□□□ -1.65
ECM22YLR228C RPP0P05317 312 aaKnown RBP4.73□□□□□ -1.65
ECM22YLR228C CIN4P39110 191 aa4.73□□□□□ -1.65
ECM22YLR228C DAN4P47179 1161 aa4.73□□□□□ -1.65
ECM22YLR228C PAP2P53632 584 aaKnown RBP4.73□□□□□ -1.65
ECM22YLR228C HOS3Q02959 697 aaKnown RBP4.73□□□□□ -1.65
ECM22YLR228C RPN7Q06103 429 aaKnown RBP4.73□□□□□ -1.65
ECM22YLR228C LSP1Q12230 341 aaKnown RBP4.73□□□□□ -1.65
ECM22YLR228C BYE1P36106 594 aa4.73□□□□□ -1.65
ECM22YLR228C RNT1Q02555 471 aa4.72□□□□□ -1.65
ECM22YLR228C SAM3Q08986 587 aa4.72□□□□□ -1.65
ECM22YLR228C MCM2P29469 868 aa4.72□□□□□ -1.65
ECM22YLR228C CBF5P33322 483 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
ECM22YLR228C YMR1P47147 688 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
ECM22YLR228C COG8Q04632 607 aa4.72□□□□□ -1.65
ECM22YLR228C YDL144CQ07589 356 aa4.72□□□□□ -1.65
ECM22YLR228C VMA1P17255 1071 aaKnown RBP4.71□□□□□ -1.66
ECM22YLR228C TAN1P53072 289 aaPredicted RBP4.71□□□□□ -1.66
ECM22YLR228C YOR1P53049 1477 aa4.71□□□□□ -1.66
ECM22YLR228C DBP1P24784 617 aaKnown RBP4.71□□□□□ -1.66
ECM22YLR228C SAP190P36123 1033 aa4.71□□□□□ -1.66
ECM22YLR228C ITC1P53125 1264 aa4.71□□□□□ -1.66
ECM22YLR228C SFI1Q12369 946 aa4.71□□□□□ -1.66
ECM22YLR228C SNQ2P32568 1501 aaKnown RBP4.7□□□□□ -1.66
ECM22YLR228C VRP1P37370 817 aa4.7□□□□□ -1.66
ECM22YLR228C CHZ1P40019 153 aaPredicted RBP4.7□□□□□ -1.66
ECM22YLR228C MAK10Q02197 733 aa4.7□□□□□ -1.66
ECM22YLR228C NOP8Q08287 484 aaPredicted RBP4.7□□□□□ -1.66
ECM22YLR228C SRP54P20424 541 aaKnown RBP4.69□□□□□ -1.66
ECM22YLR228C MIC60P36112 540 aa4.69□□□□□ -1.66
ECM22YLR228C MGA2P40578 1113 aa4.69□□□□□ -1.66
ECM22YLR228C YGL140CP53120 1219 aa4.69□□□□□ -1.66
ECM22YLR228C DPS1P04802 557 aaKnown RBP4.68□□□□□ -1.66
ECM22YLR228C SUI2P20459 304 aaKnown RBP4.68□□□□□ -1.66
ECM22YLR228C RKM3P38222 552 aa4.68□□□□□ -1.66
ECM22YLR228C CST9Q06032 482 aa4.68□□□□□ -1.66
ECM22YLR228C VMR1P38735 1592 aa4.68□□□□□ -1.66
ECM22YLR228C PSE1P32337 1089 aaKnown RBP4.68□□□□□ -1.66
ECM22YLR228C YMR102CQ03177 834 aa4.67□□□□□ -1.66
ECM22YLR228C YSH1Q06224 779 aaPredicted RBP4.67□□□□□ -1.66
ECM22YLR228C NUP157P40064 1391 aaKnown RBP4.67□□□□□ -1.66
ECM22YLR228C SWH1P35845 1188 aa4.67□□□□□ -1.66
ECM22YLR228C GDT1P38301 280 aaPredicted RBP4.67□□□□□ -1.66
ECM22YLR228C YGL081WP53156 320 aa4.67□□□□□ -1.66
ECM22YLR228C RAD9P14737 1309 aa4.66□□□□□ -1.66
ECM22YLR228C SRS2P12954 1174 aa4.66□□□□□ -1.66
ECM22YLR228C SWI3P32591 825 aa4.66□□□□□ -1.66
ECM22YLR228C HAP5Q02516 242 aa4.66□□□□□ -1.66
ECM22YLR228C RAD51P25454 400 aa4.66□□□□□ -1.66
ECM22YLR228C MFT1P33441 392 aaKnown RBP4.66□□□□□ -1.66
ECM22YLR228C RGA1P39083 1007 aa4.66□□□□□ -1.66
ECM22YLR228C VPS72Q03388 795 aa4.66□□□□□ -1.66
ECM22YLR228C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
ECM22YLR228C CYC8P14922 966 aa4.65□□□□□ -1.66
ECM22YLR228C BDP1P46678 594 aa4.65□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms