RNA–Protein interactions for RNA: YLR014C

PPR1, Transcript of Zinc finger transcription factor, yeastyeast

Gene PPR1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PPR1YLR014C RPS24BP0CX32 135 aaKnown RBP6.94□□□□□ -1.3
PPR1YLR014C PDI1P17967 522 aaKnown RBP6.94□□□□□ -1.3
PPR1YLR014C YAF9P53930 226 aa6.93□□□□□ -1.3
PPR1YLR014C HIM1Q06674 414 aa6.93□□□□□ -1.3
PPR1YLR014C CSE4P36012 229 aa6.93□□□□□ -1.3
PPR1YLR014C YNR021WP53723 404 aaKnown RBP6.93□□□□□ -1.3
PPR1YLR014C YRF1-3P0CX14 1859 aa6.92□□□□□ -1.3
PPR1YLR014C YRF1-7P0CX15 1859 aa6.92□□□□□ -1.3
PPR1YLR014C PRS1P32895 427 aaKnown RBP6.92□□□□□ -1.3
PPR1YLR014C AIM21P40563 679 aa6.92□□□□□ -1.3
PPR1YLR014C YRF1-6P53819 1859 aa6.92□□□□□ -1.3
PPR1YLR014C FPR4Q06205 392 aaPredicted RBP6.92□□□□□ -1.3
PPR1YLR014C GRX4P32642 244 aa6.92□□□□□ -1.3
PPR1YLR014C RRP46P53256 223 aaPredicted RBP6.92□□□□□ -1.3
PPR1YLR014C OCA5P38738 679 aa6.91□□□□□ -1.3
PPR1YLR014C RTF1P53064 558 aa6.91□□□□□ -1.3
PPR1YLR014C RIM101P33400 625 aa6.9□□□□□ -1.3
PPR1YLR014C TY4A-JP47023 414 aa6.9□□□□□ -1.3
PPR1YLR014C UBX5Q06682 500 aa6.9□□□□□ -1.3
PPR1YLR014C RPO41P13433 1351 aaKnown RBP6.9□□□□□ -1.31
PPR1YLR014C KAR2P16474 682 aaKnown RBP6.89□□□□□ -1.31
PPR1YLR014C HEM3P28789 327 aa6.89□□□□□ -1.31
PPR1YLR014C GLC3P32775 704 aa6.89□□□□□ -1.31
PPR1YLR014C NMD2P38798 1089 aaKnown RBP6.89□□□□□ -1.31
PPR1YLR014C TOM20P35180 183 aa6.89□□□□□ -1.31
PPR1YLR014C PRP5P21372 849 aaPredicted RBP6.88□□□□□ -1.31
PPR1YLR014C GUA1P38625 525 aaKnown RBP6.88□□□□□ -1.31
PPR1YLR014C DPS1P04802 557 aaKnown RBP6.88□□□□□ -1.31
PPR1YLR014C RPT2P40327 437 aaKnown RBP6.88□□□□□ -1.31
PPR1YLR014C GAS4Q08271 471 aa6.88□□□□□ -1.31
PPR1YLR014C YRF1-4O13559 1382 aa6.88□□□□□ -1.31
PPR1YLR014C PRP45P28004 379 aaPredicted RBP6.87□□□□□ -1.31
PPR1YLR014C MSB3P48566 633 aaPredicted RBP6.87□□□□□ -1.31
PPR1YLR014C RPP0P05317 312 aaKnown RBP6.86□□□□□ -1.31
PPR1YLR014C CAB3P36076 571 aa6.86□□□□□ -1.31
PPR1YLR014C REB1P21538 810 aa6.86□□□□□ -1.31
PPR1YLR014C MGA2P40578 1113 aa6.86□□□□□ -1.31
PPR1YLR014C MPP10P47083 593 aaKnown RBP6.86□□□□□ -1.31
PPR1YLR014C SLM3Q12093 417 aa6.86□□□□□ -1.31
PPR1YLR014C SSA4P22202 642 aaKnown RBP6.85□□□□□ -1.31
PPR1YLR014C RPL34AP87262 121 aaPredicted RBP6.85□□□□□ -1.31
PPR1YLR014C GAL11P19659 1081 aa6.85□□□□□ -1.31
PPR1YLR014C RPS0AP32905 252 aaKnown RBP6.85□□□□□ -1.31
PPR1YLR014C DSF2P38213 736 aa6.85□□□□□ -1.31
PPR1YLR014C RLP24Q07915 199 aaKnown RBP6.85□□□□□ -1.31
PPR1YLR014C AIM7Q12156 149 aa6.85□□□□□ -1.31
PPR1YLR014C YIL055CP40523 627 aaKnown RBP6.84□□□□□ -1.31
PPR1YLR014C RSF2P46974 1380 aa6.84□□□□□ -1.31
PPR1YLR014C YLR271WQ06152 274 aa6.84□□□□□ -1.32
PPR1YLR014C YDL144CQ07589 356 aa6.84□□□□□ -1.32
PPR1YLR014C ISW1P38144 1129 aa6.83□□□□□ -1.32
PPR1YLR014C NNF1P47149 201 aa6.83□□□□□ -1.32
PPR1YLR014C BRE1Q07457 700 aaKnown RBP6.83□□□□□ -1.32
PPR1YLR014C SPT16P32558 1035 aaKnown RBP6.83□□□□□ -1.32
PPR1YLR014C SET1P38827 1080 aaKnown RBP6.83□□□□□ -1.32
PPR1YLR014C RTR1P40084 226 aaPredicted RBP6.83□□□□□ -1.32
PPR1YLR014C SIR4P11978 1358 aa6.82□□□□□ -1.32
PPR1YLR014C PRD1P25375 712 aa6.82□□□□□ -1.32
PPR1YLR014C VPS27P40343 622 aaKnown RBP6.82□□□□□ -1.32
PPR1YLR014C ENT1Q12518 454 aa6.82□□□□□ -1.32
PPR1YLR014C TSR4P25040 408 aa6.82□□□□□ -1.32
PPR1YLR014C RRP14P36080 434 aaKnown RBP6.82□□□□□ -1.32
PPR1YLR014C PAP2P53632 584 aaKnown RBP6.82□□□□□ -1.32
PPR1YLR014C APP1P53933 587 aa6.82□□□□□ -1.32
PPR1YLR014C KEX1P09620 729 aa6.81□□□□□ -1.32
PPR1YLR014C CDC3P32457 520 aaKnown RBP6.81□□□□□ -1.32
PPR1YLR014C THI22Q06490 572 aa6.81□□□□□ -1.32
PPR1YLR014C SUI2P20459 304 aaKnown RBP6.81□□□□□ -1.32
PPR1YLR014C CST6P40535 587 aa6.81□□□□□ -1.32
PPR1YLR014C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
PPR1YLR014C YPR148CQ06523 435 aa6.81□□□□□ -1.32
PPR1YLR014C CDC45Q08032 650 aa6.81□□□□□ -1.32
PPR1YLR014C TCB1Q12466 1186 aa6.81□□□□□ -1.32
PPR1YLR014C NHA1Q99271 985 aa6.81□□□□□ -1.32
PPR1YLR014C RIM15P43565 1770 aa6.81□□□□□ -1.32
PPR1YLR014C AKL1P38080 1108 aaKnown RBP6.8□□□□□ -1.32
PPR1YLR014C TFB3Q03290 321 aa6.8□□□□□ -1.32
PPR1YLR014C PBS2P08018 668 aa6.8□□□□□ -1.32
PPR1YLR014C RNH70P53331 553 aa6.8□□□□□ -1.32
PPR1YLR014C HEF3P53978 1044 aaKnown RBP6.8□□□□□ -1.32
PPR1YLR014C ENV9Q08651 330 aa6.8□□□□□ -1.32
PPR1YLR014C RPA135P22138 1203 aaKnown RBP6.79□□□□□ -1.32
PPR1YLR014C XKS1P42826 600 aa6.79□□□□□ -1.32
PPR1YLR014C DSD1P53095 428 aa6.79□□□□□ -1.32
PPR1YLR014C HPC2Q01448 625 aa6.79□□□□□ -1.32
PPR1YLR014C PPG1P32838 368 aa6.78□□□□□ -1.32
PPR1YLR014C PMC1P38929 1173 aaPredicted RBP6.78□□□□□ -1.32
PPR1YLR014C ERP2P39704 215 aa6.78□□□□□ -1.32
PPR1YLR014C GIR2Q03768 265 aaPredicted RBP6.78□□□□□ -1.32
PPR1YLR014C RVB2Q12464 471 aaKnown RBP6.78□□□□□ -1.32
PPR1YLR014C RAD2P07276 1031 aa6.78□□□□□ -1.32
PPR1YLR014C SAP155P43612 1002 aa6.78□□□□□ -1.32
PPR1YLR014C MPE1P35728 441 aaKnown RBP6.78□□□□□ -1.32
PPR1YLR014C TPM2P40414 161 aa6.78□□□□□ -1.32
PPR1YLR014C SEN54Q02825 467 aaPredicted RBP6.78□□□□□ -1.32
PPR1YLR014C RCR1P38212 213 aa6.77□□□□□ -1.33
PPR1YLR014C RTT109Q07794 436 aa6.77□□□□□ -1.33
PPR1YLR014C OXP1P28273 1286 aa6.76□□□□□ -1.33
PPR1YLR014C NTH2P35172 780 aa6.76□□□□□ -1.33
PPR1YLR014C YDL121CQ07541 149 aa6.76□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms