RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C TY1A-HP0C2I4 478 aaKnown RBP6.85□□□□□ -1.31
UBI4YLL039C TY1A-AP0CX57 440 aa6.85□□□□□ -1.31
UBI4YLL039C TY1A-PR1P0CX58 440 aa6.85□□□□□ -1.31
UBI4YLL039C TY1A-ORP0CX59 440 aa6.85□□□□□ -1.31
UBI4YLL039C TY1A-PR2P0CX60 440 aa6.85□□□□□ -1.31
UBI4YLL039C TY1A-DR5P0CX65 440 aa6.85□□□□□ -1.31
UBI4YLL039C TY1A-ER2P0CX66 440 aa6.85□□□□□ -1.31
UBI4YLL039C TY1A-GR3P0CX67 440 aa6.85□□□□□ -1.31
UBI4YLL039C TY1A-LR1P0CX68 440 aa6.85□□□□□ -1.31
UBI4YLL039C TY1A-MR2P0CX69 440 aa6.85□□□□□ -1.31
UBI4YLL039C TY1A-JR2P47099 440 aa6.85□□□□□ -1.31
UBI4YLL039C TY1A-DR1Q03856 440 aa6.85□□□□□ -1.31
UBI4YLL039C TY1A-ML1Q04706 440 aaKnown RBP6.85□□□□□ -1.31
UBI4YLL039C TY1A-BRQ12217 440 aa6.85□□□□□ -1.31
UBI4YLL039C TY1A-NL2Q12470 440 aa6.85□□□□□ -1.31
UBI4YLL039C TY1A-GR2Q12485 440 aa6.85□□□□□ -1.31
UBI4YLL039C IRC20Q06554 1556 aa6.85□□□□□ -1.31
UBI4YLL039C SEC2P17065 759 aa6.84□□□□□ -1.31
UBI4YLL039C NUP170P38181 1502 aa6.83□□□□□ -1.32
UBI4YLL039C GDB1Q06625 1536 aa6.83□□□□□ -1.32
UBI4YLL039C RGA1P39083 1007 aa6.83□□□□□ -1.32
UBI4YLL039C MMS1Q06211 1407 aa6.83□□□□□ -1.32
UBI4YLL039C RGR1P19263 1082 aa6.82□□□□□ -1.32
UBI4YLL039C NPL4P33755 580 aa6.82□□□□□ -1.32
UBI4YLL039C GEA1P47102 1408 aaPredicted RBP6.82□□□□□ -1.32
UBI4YLL039C NUP157P40064 1391 aaKnown RBP6.82□□□□□ -1.32
UBI4YLL039C ERG12P07277 443 aa6.81□□□□□ -1.32
UBI4YLL039C GCD11P32481 527 aaKnown RBP6.81□□□□□ -1.32
UBI4YLL039C CST6P40535 587 aa6.81□□□□□ -1.32
UBI4YLL039C YPR109WQ06104 294 aa6.81□□□□□ -1.32
UBI4YLL039C RGA2Q06407 1009 aa6.81□□□□□ -1.32
UBI4YLL039C IQG1Q12280 1495 aa6.79□□□□□ -1.32
UBI4YLL039C PDR10P51533 1564 aa6.79□□□□□ -1.32
UBI4YLL039C CAT8P39113 1433 aa6.77□□□□□ -1.33
UBI4YLL039C TY3B-GQ99315 1547 aa6.77□□□□□ -1.33
UBI4YLL039C BUD3P25558 1636 aa6.77□□□□□ -1.33
UBI4YLL039C CLA4P48562 842 aa6.77□□□□□ -1.33
UBI4YLL039C AIR1P40507 360 aaKnown RBP6.76□□□□□ -1.33
UBI4YLL039C LAM6Q08001 693 aa6.76□□□□□ -1.33
UBI4YLL039C YBT1P32386 1661 aa6.75□□□□□ -1.33
UBI4YLL039C SPT16P32558 1035 aaKnown RBP6.75□□□□□ -1.33
UBI4YLL039C DOP1Q03921 1698 aa6.74□□□□□ -1.33
UBI4YLL039C SEC7P11075 2009 aaKnown RBP6.74□□□□□ -1.33
UBI4YLL039C TRM3Q07527 1436 aa6.74□□□□□ -1.33
UBI4YLL039C RRN7P40992 514 aa6.73□□□□□ -1.33
UBI4YLL039C DNF2Q12675 1612 aa6.72□□□□□ -1.33
UBI4YLL039C PBS2P08018 668 aa6.72□□□□□ -1.33
UBI4YLL039C CKB1P43639 278 aa6.72□□□□□ -1.33
UBI4YLL039C ERF2Q06551 359 aa6.72□□□□□ -1.33
UBI4YLL039C KEX2P13134 814 aa6.71□□□□□ -1.34
UBI4YLL039C ARO1P08566 1588 aaKnown RBP6.7□□□□□ -1.34
UBI4YLL039C FRK1Q03002 865 aaPredicted RBP6.7□□□□□ -1.34
UBI4YLL039C YSP2Q06681 1438 aa6.69□□□□□ -1.34
UBI4YLL039C PSE1P32337 1089 aaKnown RBP6.69□□□□□ -1.34
UBI4YLL039C BRE2P43132 505 aa6.69□□□□□ -1.34
UBI4YLL039C BDP1P46678 594 aa6.69□□□□□ -1.34
UBI4YLL039C PAT1P25644 796 aaKnown RBP6.67□□□□□ -1.34
UBI4YLL039C CHC1P22137 1653 aaKnown RBP6.66□□□□□ -1.34
UBI4YLL039C CDC4P07834 779 aa6.65□□□□□ -1.34
UBI4YLL039C BNR1P40450 1375 aa6.65□□□□□ -1.35
UBI4YLL039C SRB8P25648 1427 aa6.65□□□□□ -1.35
UBI4YLL039C PAC1P39946 494 aaKnown RBP6.64□□□□□ -1.35
UBI4YLL039C IKI3Q06706 1349 aaKnown RBP6.64□□□□□ -1.35
UBI4YLL039C GCR2Q01722 534 aa6.63□□□□□ -1.35
UBI4YLL039C AGE1Q04412 482 aa6.63□□□□□ -1.35
UBI4YLL039C MAM3Q12296 706 aa6.63□□□□□ -1.35
UBI4YLL039C MOD5P07884 428 aa6.62□□□□□ -1.35
UBI4YLL039C YPL062WQ02781 134 aa6.62□□□□□ -1.35
UBI4YLL039C HED1Q03937 162 aa6.62□□□□□ -1.35
UBI4YLL039C CLB5P30283 435 aa6.61□□□□□ -1.35
UBI4YLL039C DSF2P38213 736 aa6.61□□□□□ -1.35
UBI4YLL039C TUB4P53378 473 aa6.6□□□□□ -1.35
UBI4YLL039C YOR093CQ12275 1648 aa6.59□□□□□ -1.35
UBI4YLL039C IES2P40154 320 aa6.59□□□□□ -1.35
UBI4YLL039C BUD21Q08492 214 aaPredicted RBP6.59□□□□□ -1.35
UBI4YLL039C NUP42P49686 430 aaKnown RBP6.58□□□□□ -1.36
UBI4YLL039C RTF1P53064 558 aa6.58□□□□□ -1.36
UBI4YLL039C GAR1P28007 205 aaKnown RBP6.57□□□□□ -1.36
UBI4YLL039C YAP3P38749 330 aa6.57□□□□□ -1.36
UBI4YLL039C YNL115CP53925 644 aa6.57□□□□□ -1.36
UBI4YLL039C SIT4P20604 311 aa6.56□□□□□ -1.36
UBI4YLL039C SSM4P40318 1319 aa6.55□□□□□ -1.36
UBI4YLL039C DMA1P38823 416 aa6.55□□□□□ -1.36
UBI4YLL039C URN1Q06525 465 aaKnown RBP6.55□□□□□ -1.36
UBI4YLL039C MET32Q12041 191 aa6.55□□□□□ -1.36
UBI4YLL039C MET22P32179 357 aa6.54□□□□□ -1.36
UBI4YLL039C PUS5Q06244 254 aa6.54□□□□□ -1.36
UBI4YLL039C TEA1P47988 759 aa6.53□□□□□ -1.36
UBI4YLL039C NIS1P53939 407 aa6.53□□□□□ -1.36
UBI4YLL039C DNF3Q12674 1656 aa6.52□□□□□ -1.37
UBI4YLL039C ASH1P34233 588 aa6.52□□□□□ -1.37
UBI4YLL039C DIT2P21595 489 aa6.51□□□□□ -1.37
UBI4YLL039C ENV9Q08651 330 aa6.51□□□□□ -1.37
UBI4YLL039C AFT1P22149 690 aa6.5□□□□□ -1.37
UBI4YLL039C IPL1P38991 367 aa6.5□□□□□ -1.37
UBI4YLL039C GBP2P25555 427 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
UBI4YLL039C NUP188P52593 1655 aaKnown RBP6.49□□□□□ -1.37
UBI4YLL039C TPD3P31383 635 aa6.48□□□□□ -1.37
UBI4YLL039C MAK10Q02197 733 aa6.47□□□□□ -1.37
UBI4YLL039C SPB4P25808 606 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms