RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeastyeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSA2YKR077W ENV9Q08651 330 aa9.34□□□□□ -0.91
MSA2YKR077W YPL062WQ02781 134 aa9.33□□□□□ -0.92
MSA2YKR077W IXR1P33417 597 aa9.31□□□□□ -0.92
MSA2YKR077W CSE4P36012 229 aa9.31□□□□□ -0.92
MSA2YKR077W YJR115WP47152 169 aa9.31□□□□□ -0.92
MSA2YKR077W YDR444WQ04093 687 aa9.31□□□□□ -0.92
MSA2YKR077W MSB3P48566 633 aaPredicted RBP9.3□□□□□ -0.92
MSA2YKR077W YJL007CP47080 104 aa9.29□□□□□ -0.92
MSA2YKR077W RGA2Q06407 1009 aa9.28□□□□□ -0.92
MSA2YKR077W MAK16P10962 306 aaPredicted RBP9.26□□□□□ -0.93
MSA2YKR077W UGA3P26370 528 aa9.26□□□□□ -0.93
MSA2YKR077W BIM1P40013 344 aa9.26□□□□□ -0.93
MSA2YKR077W RLF2Q12495 606 aa9.26□□□□□ -0.93
MSA2YKR077W BIO2P32451 375 aa9.25□□□□□ -0.93
MSA2YKR077W LCB5Q06147 687 aaKnown RBP9.25□□□□□ -0.93
MSA2YKR077W VAC17P25591 423 aa9.23□□□□□ -0.93
MSA2YKR077W MRT4P33201 236 aaKnown RBP9.23□□□□□ -0.93
MSA2YKR077W SPT5P27692 1063 aaKnown RBP9.22□□□□□ -0.93
MSA2YKR077W ATG32P40458 529 aa9.22□□□□□ -0.93
MSA2YKR077W RPL34BP40525 121 aaKnown RBP9.2□□□□□ -0.94
MSA2YKR077W PTK2P47116 818 aaKnown RBP9.2□□□□□ -0.94
MSA2YKR077W SRF1Q12516 437 aa9.2□□□□□ -0.94
MSA2YKR077W NAF1P53919 492 aaKnown RBP9.19□□□□□ -0.94
MSA2YKR077W YNL108CP53929 270 aa9.18□□□□□ -0.94
MSA2YKR077W TIF1P10081 395 aaKnown RBP9.17□□□□□ -0.94
MSA2YKR077W YDJ1P25491 409 aaKnown RBP9.16□□□□□ -0.94
MSA2YKR077W SUP45P12385 437 aaKnown RBP9.15□□□□□ -0.94
MSA2YKR077W ITT1Q04638 464 aa9.15□□□□□ -0.94
MSA2YKR077W RTT106P40161 455 aa9.13□□□□□ -0.95
MSA2YKR077W APP1P53933 587 aa9.12□□□□□ -0.95
MSA2YKR077W YDL176WQ12027 708 aa9.12□□□□□ -0.95
MSA2YKR077W ENO2P00925 437 aaKnown RBP9.11□□□□□ -0.95
MSA2YKR077W TEC1P18412 486 aa9.11□□□□□ -0.95
MSA2YKR077W RTG2P32608 588 aaKnown RBP9.11□□□□□ -0.95
MSA2YKR077W FIG4P42837 879 aa9.11□□□□□ -0.95
MSA2YKR077W YBL086CP38177 466 aa9.1□□□□□ -0.95
MSA2YKR077W OPT2Q06593 877 aa9.1□□□□□ -0.95
MSA2YKR077W MCM16Q12262 181 aa9.1□□□□□ -0.95
MSA2YKR077W NUP85P46673 744 aa9.08□□□□□ -0.96
MSA2YKR077W YPP1P46951 817 aa9.08□□□□□ -0.96
MSA2YKR077W YLR346CQ06139 101 aa9.08□□□□□ -0.96
MSA2YKR077W EMW1P42842 904 aaKnown RBP9.07□□□□□ -0.96
MSA2YKR077W YPR204WQ08995 1032 aa9.07□□□□□ -0.96
MSA2YKR077W RIM21P48565 533 aa9.06□□□□□ -0.96
MSA2YKR077W ARG82P07250 355 aa9.05□□□□□ -0.96
MSA2YKR077W GUT2P32191 649 aa9.05□□□□□ -0.96
MSA2YKR077W AAD14P42884 376 aa9.05□□□□□ -0.96
MSA2YKR077W CAF120P53836 1060 aa9.05□□□□□ -0.96
MSA2YKR077W YPR084WQ06821 456 aa9.05□□□□□ -0.96
MSA2YKR077W STE20Q03497 939 aaKnown RBP9.04□□□□□ -0.96
MSA2YKR077W FRA1Q07825 749 aa9.04□□□□□ -0.96
MSA2YKR077W ISF1P32488 338 aa9.03□□□□□ -0.96
MSA2YKR077W EMP47P43555 445 aa9.03□□□□□ -0.96
MSA2YKR077W ENO1P00924 437 aaKnown RBP9.02□□□□□ -0.97
MSA2YKR077W MIP1P15801 1254 aa9.01□□□□□ -0.97
MSA2YKR077W MKS1P34072 584 aa9.01□□□□□ -0.97
MSA2YKR077W GLY1P37303 387 aaKnown RBP9.01□□□□□ -0.97
MSA2YKR077W MRX12P47084 519 aa9.01□□□□□ -0.97
MSA2YKR077W MRX10Q05648 414 aa9.01□□□□□ -0.97
MSA2YKR077W ACO2P39533 789 aa9□□□□□ -0.97
MSA2YKR077W SCW11P53189 542 aa8.99□□□□□ -0.97
MSA2YKR077W LSC2P53312 427 aa8.99□□□□□ -0.97
MSA2YKR077W DFG5Q05031 458 aa8.98□□□□□ -0.97
MSA2YKR077W DLD1P32891 587 aa8.97□□□□□ -0.97
MSA2YKR077W SIS2P36024 562 aa8.96□□□□□ -0.98
MSA2YKR077W TTI1P36097 1038 aa8.96□□□□□ -0.98
MSA2YKR077W TY1A-BLQ12266 440 aa8.96□□□□□ -0.98
MSA2YKR077W ATG3P40344 310 aa8.95□□□□□ -0.98
MSA2YKR077W YJR098CP47139 656 aa8.95□□□□□ -0.98
MSA2YKR077W RDS2P19541 446 aaKnown RBP8.94□□□□□ -0.98
MSA2YKR077W SSA4P22202 642 aaKnown RBP8.93□□□□□ -0.98
MSA2YKR077W CPS1P27614 576 aa8.93□□□□□ -0.98
MSA2YKR077W FBP26P32604 452 aa8.93□□□□□ -0.98
MSA2YKR077W YIR007WP40566 764 aa8.93□□□□□ -0.98
MSA2YKR077W APL6P46682 809 aa8.93□□□□□ -0.98
MSA2YKR077W UBP2Q01476 1272 aa8.92□□□□□ -0.98
MSA2YKR077W BDS1Q08347 646 aa8.91□□□□□ -0.98
MSA2YKR077W TCB1Q12466 1186 aa8.91□□□□□ -0.98
MSA2YKR077W PEP12P32854 288 aa8.9□□□□□ -0.98
MSA2YKR077W UTP13Q05946 817 aaKnown RBP8.9□□□□□ -0.98
MSA2YKR077W SOH1P38633 127 aa8.89□□□□□ -0.99
MSA2YKR077W SUB2Q07478 446 aaKnown RBP8.88□□□□□ -0.99
MSA2YKR077W ATG20Q07528 640 aa8.88□□□□□ -0.99
MSA2YKR077W STE6P12866 1290 aa8.86□□□□□ -0.99
MSA2YKR077W YGR035CP53222 116 aa8.85□□□□□ -0.99
MSA2YKR077W ISR1Q06098 443 aaKnown RBP8.85□□□□□ -0.99
MSA2YKR077W KTR7P40504 517 aa8.84□□□□□ -0.99
MSA2YKR077W TGL4P36165 910 aa8.83□□□□□ -1
MSA2YKR077W ISU1Q03020 165 aa8.83□□□□□ -1
MSA2YKR077W OSH7P38755 437 aa8.82□□□□□ -1
MSA2YKR077W ROG3P43602 733 aa8.82□□□□□ -1
MSA2YKR077W HAL5P38970 855 aaKnown RBP8.81□□□□□ -1
MSA2YKR077W HPF1Q05164 967 aa8.81□□□□□ -1
MSA2YKR077W PUP1P25043 261 aa8.8□□□□□ -1
MSA2YKR077W SSA1P10591 642 aaKnown RBP8.78□□□□□ -1
MSA2YKR077W TY1A-MR1Q04215 440 aa8.78□□□□□ -1
MSA2YKR077W NOB1Q08444 459 aaKnown RBP8.78□□□□□ -1
MSA2YKR077W GAL2P13181 574 aa8.77□□□□□ -1.01
MSA2YKR077W DLD3P39976 496 aaKnown RBP8.77□□□□□ -1.01
MSA2YKR077W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.77□□□□□ -1.01not detected
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms