RNA–Protein interactions for RNA: YKR055W

RHO4, Transcript of Non-essential small GTPase, yeastyeast

Gene RHO4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RHO4YKR055W MSH4P40965 878 aaPredicted RBP6.89□□□□□ -1.31
RHO4YKR055W SMC3P47037 1230 aa6.88□□□□□ -1.31
RHO4YKR055W APP1P53933 587 aa6.88□□□□□ -1.31
RHO4YKR055W TLG1Q03322 224 aa6.88□□□□□ -1.31
RHO4YKR055W NUP188P52593 1655 aaKnown RBP6.87□□□□□ -1.31
RHO4YKR055W NNF2P53253 936 aa6.87□□□□□ -1.31
RHO4YKR055W NST1P53935 1240 aa6.87□□□□□ -1.31
RHO4YKR055W GRX3Q03835 250 aa6.87□□□□□ -1.31
RHO4YKR055W ETT1Q08421 412 aaKnown RBP6.87□□□□□ -1.31
RHO4YKR055W SIC1P38634 284 aa6.86□□□□□ -1.31
RHO4YKR055W TAN1P53072 289 aaPredicted RBP6.86□□□□□ -1.31
RHO4YKR055W CTR9P89105 1077 aa6.85□□□□□ -1.31
RHO4YKR055W YSH1Q06224 779 aaPredicted RBP6.85□□□□□ -1.31
RHO4YKR055W NOP58Q12499 511 aaKnown RBP6.85□□□□□ -1.31
RHO4YKR055W IML1P47170 1584 aa6.85□□□□□ -1.31
RHO4YKR055W PET111P08468 800 aa6.84□□□□□ -1.31
RHO4YKR055W SSA1P10591 642 aaKnown RBP6.84□□□□□ -1.31
RHO4YKR055W SPT16P32558 1035 aaKnown RBP6.84□□□□□ -1.31
RHO4YKR055W NHA1Q99271 985 aa6.84□□□□□ -1.31
RHO4YKR055W DAN4P47179 1161 aa6.83□□□□□ -1.32
RHO4YKR055W CFT1Q06632 1357 aaKnown RBP6.82□□□□□ -1.32
RHO4YKR055W ROX1P25042 368 aa6.82□□□□□ -1.32
RHO4YKR055W MSH3P25336 1018 aa6.82□□□□□ -1.32
RHO4YKR055W LTV1P34078 463 aa6.82□□□□□ -1.32
RHO4YKR055W PRP3Q03338 469 aaPredicted RBP6.82□□□□□ -1.32
RHO4YKR055W GYP5Q12344 894 aa6.82□□□□□ -1.32
RHO4YKR055W SRB8P25648 1427 aa6.82□□□□□ -1.32
RHO4YKR055W VMR1P38735 1592 aa6.82□□□□□ -1.32
RHO4YKR055W TOA1P32773 286 aa6.81□□□□□ -1.32
RHO4YKR055W RAD26P40352 1085 aa6.81□□□□□ -1.32
RHO4YKR055W NOP8Q08287 484 aaPredicted RBP6.81□□□□□ -1.32
RHO4YKR055W RPC31P17890 251 aa6.8□□□□□ -1.32
RHO4YKR055W CBF5P33322 483 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
RHO4YKR055W TFG1P41895 735 aaPredicted RBP6.8□□□□□ -1.32
RHO4YKR055W JIP4Q03361 876 aa6.8□□□□□ -1.32
RHO4YKR055W SAP190P36123 1033 aa6.79□□□□□ -1.32
RHO4YKR055W SAP30P38429 201 aa6.79□□□□□ -1.32
RHO4YKR055W CHZ1P40019 153 aaPredicted RBP6.79□□□□□ -1.32
RHO4YKR055W RPN7Q06103 429 aaKnown RBP6.79□□□□□ -1.32
RHO4YKR055W BCK1Q01389 1478 aa6.79□□□□□ -1.32
RHO4YKR055W SRP54P20424 541 aaKnown RBP6.78□□□□□ -1.32
RHO4YKR055W DCW1P36091 449 aa6.78□□□□□ -1.32
RHO4YKR055W DOS2P54858 310 aa6.78□□□□□ -1.32
RHO4YKR055W APL5Q08951 932 aaKnown RBP6.78□□□□□ -1.32
RHO4YKR055W GIN4Q12263 1142 aa6.78□□□□□ -1.32
RHO4YKR055W EDE1P34216 1381 aa6.78□□□□□ -1.32
RHO4YKR055W YLR419WQ06698 1435 aaKnown RBP6.77□□□□□ -1.33
RHO4YKR055W ECM16Q04217 1267 aaKnown RBP6.77□□□□□ -1.33
RHO4YKR055W CAT8P39113 1433 aa6.76□□□□□ -1.33
RHO4YKR055W HTA1P04911 132 aaKnown RBP6.76□□□□□ -1.33
RHO4YKR055W HTA2P04912 132 aa6.76□□□□□ -1.33
RHO4YKR055W SSA2P10592 639 aaKnown RBP6.76□□□□□ -1.33
RHO4YKR055W YIR014WP40570 242 aa6.76□□□□□ -1.33
RHO4YKR055W DMA1P38823 416 aa6.75□□□□□ -1.33
RHO4YKR055W SLN1P39928 1220 aaPredicted RBP6.75□□□□□ -1.33
RHO4YKR055W PEA2P40091 420 aa6.75□□□□□ -1.33
RHO4YKR055W RRP15Q06511 250 aaPredicted RBP6.75□□□□□ -1.33
RHO4YKR055W YDL129WQ07555 291 aa6.75□□□□□ -1.33
RHO4YKR055W PDR11P40550 1411 aa6.75□□□□□ -1.33
RHO4YKR055W CDC11P32458 415 aa6.74□□□□□ -1.33
RHO4YKR055W PTC4P38089 393 aa6.74□□□□□ -1.33
RHO4YKR055W IPL1P38991 367 aa6.74□□□□□ -1.33
RHO4YKR055W DSN1P40568 576 aa6.74□□□□□ -1.33
RHO4YKR055W MPP10P47083 593 aaKnown RBP6.74□□□□□ -1.33
RHO4YKR055W SUB1P54000 292 aaKnown RBP6.74□□□□□ -1.33
RHO4YKR055W IKI3Q06706 1349 aaKnown RBP6.74□□□□□ -1.33
RHO4YKR055W NOT3P06102 836 aaKnown RBP6.73□□□□□ -1.33
RHO4YKR055W SWE1P32944 819 aa6.73□□□□□ -1.33
RHO4YKR055W YEL023CP39992 682 aa6.73□□□□□ -1.33
RHO4YKR055W CKB1P43639 278 aa6.72□□□□□ -1.33
RHO4YKR055W YVC1Q12324 675 aa6.72□□□□□ -1.33
RHO4YKR055W SWI3P32591 825 aa6.71□□□□□ -1.34
RHO4YKR055W RRP14P36080 434 aaKnown RBP6.71□□□□□ -1.34
RHO4YKR055W MED8P38304 223 aa6.71□□□□□ -1.34
RHO4YKR055W ALD3P54114 506 aa6.71□□□□□ -1.34
RHO4YKR055W ORC1P54784 914 aaPredicted RBP6.71□□□□□ -1.34
RHO4YKR055W BMS1Q08965 1183 aaKnown RBP6.71□□□□□ -1.34
RHO4YKR055W CHL1P22516 861 aaPredicted RBP6.7□□□□□ -1.34
RHO4YKR055W UBP1P25037 809 aa6.7□□□□□ -1.34
RHO4YKR055W RAD51P25454 400 aa6.7□□□□□ -1.34
RHO4YKR055W ERV41Q04651 352 aa6.7□□□□□ -1.34
RHO4YKR055W BCK2P33306 851 aa6.69□□□□□ -1.34
RHO4YKR055W BRL1P38770 471 aa6.69□□□□□ -1.34
RHO4YKR055W NAB3P38996 802 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
RHO4YKR055W RSC8P43609 557 aaKnown RBP6.69□□□□□ -1.34
RHO4YKR055W VID30P53076 958 aa6.69□□□□□ -1.34
RHO4YKR055W YLL054CQ12244 843 aa6.69□□□□□ -1.34
RHO4YKR055W HSC82P15108 705 aaKnown RBP6.68□□□□□ -1.34
RHO4YKR055W PRE3P38624 215 aa6.68□□□□□ -1.34
RHO4YKR055W YMR124WP39523 943 aaKnown RBP6.68□□□□□ -1.34
RHO4YKR055W ECM1P39715 212 aa6.68□□□□□ -1.34
RHO4YKR055W YPP1P46951 817 aa6.67□□□□□ -1.34
RHO4YKR055W VPS72Q03388 795 aa6.67□□□□□ -1.34
RHO4YKR055W IMH1Q06704 911 aaKnown RBP6.67□□□□□ -1.34
RHO4YKR055W MCM1P11746 286 aa6.66□□□□□ -1.34
RHO4YKR055W CLB5P30283 435 aa6.66□□□□□ -1.34
RHO4YKR055W RPC82P32349 654 aa6.66□□□□□ -1.34
RHO4YKR055W ENT1Q12518 454 aa6.66□□□□□ -1.34
RHO4YKR055W DEP1P31385 405 aa6.65□□□□□ -1.34
RHO4YKR055W UGA2P38067 497 aa6.65□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms