RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	RPS0A	P32905	252 aa	Known RBP	4.28	□□□□□ -1.72
PEX1	YKL197C	SPT23	P35210	1082 aa		4.28	□□□□□ -1.72
PEX1	YKL197C	TUM1	Q08686	304 aa	Known RBP	4.28	□□□□□ -1.72
PEX1	YKL197C	TCB2	P48231	1178 aa		4.27	□□□□□ -1.73
PEX1	YKL197C	TLG1	Q03322	224 aa		4.27	□□□□□ -1.73
PEX1	YKL197C	RPA190	P10964	1664 aa	Known RBP	4.26	□□□□□ -1.73
PEX1	YKL197C	YNR021W	P53723	404 aa	Known RBP	4.26	□□□□□ -1.73
PEX1	YKL197C	ELP4	Q02884	456 aa	Known RBP	4.26	□□□□□ -1.73
PEX1	YKL197C	FPR4	Q06205	392 aa	Predicted RBP	4.26	□□□□□ -1.73
PEX1	YKL197C	BUD20	Q08004	166 aa	Predicted RBP	4.26	□□□□□ -1.73
PEX1	YKL197C	YRR1	Q12172	810 aa		4.26	□□□□□ -1.73
PEX1	YKL197C	TAF2	P23255	1407 aa		4.26	□□□□□ -1.73
PEX1	YKL197C	RNA1	P11745	407 aa	Known RBP	4.26	□□□□□ -1.73
PEX1	YKL197C	ISM1	P48526	1002 aa		4.26	□□□□□ -1.73
PEX1	YKL197C	YPR109W	Q06104	294 aa		4.26	□□□□□ -1.73
PEX1	YKL197C	GLC3	P32775	704 aa		4.25	□□□□□ -1.73
PEX1	YKL197C	NIS1	P53939	407 aa		4.25	□□□□□ -1.73
PEX1	YKL197C	ERF2	Q06551	359 aa		4.25	□□□□□ -1.73
PEX1	YKL197C	TOP2	P06786	1428 aa	Known RBP	4.25	□□□□□ -1.73
PEX1	YKL197C	HSP82	P02829	709 aa	Known RBP	4.25	□□□□□ -1.73
PEX1	YKL197C	SIT4	P20604	311 aa		4.25	□□□□□ -1.73
PEX1	YKL197C	UFD4	P33202	1483 aa		4.25	□□□□□ -1.73
PEX1	YKL197C	RKR1	Q04781	1562 aa		4.24	□□□□□ -1.73
PEX1	YKL197C	YOR1	P53049	1477 aa		4.24	□□□□□ -1.73
PEX1	YKL197C	ESC1	Q03661	1658 aa	Known RBP	4.24	□□□□□ -1.73
PEX1	YKL197C	TAF13	P11747	167 aa		4.24	□□□□□ -1.73
PEX1	YKL197C	BRN1	P38170	754 aa		4.24	□□□□□ -1.73
PEX1	YKL197C	VPS72	Q03388	795 aa		4.24	□□□□□ -1.73
PEX1	YKL197C	ENP1	P38333	483 aa	Known RBP	4.24	□□□□□ -1.73
PEX1	YKL197C	AGE1	Q04412	482 aa		4.24	□□□□□ -1.73
PEX1	YKL197C	SKI3	P17883	1432 aa	Known RBP	4.23	□□□□□ -1.73
PEX1	YKL197C	SMC4	Q12267	1418 aa		4.23	□□□□□ -1.73
PEX1	YKL197C	KTR1	P27810	393 aa	Known RBP	4.23	□□□□□ -1.73
PEX1	YKL197C	VRP1	P37370	817 aa		4.23	□□□□□ -1.73
PEX1	YKL197C	FUN12	P39730	1002 aa	Known RBP	4.23	□□□□□ -1.73
PEX1	YKL197C	YGR130C	P53278	816 aa		4.23	□□□□□ -1.73
PEX1	YKL197C	NUD1	P32336	851 aa		4.23	□□□□□ -1.73
PEX1	YKL197C	SPT16	P32558	1035 aa	Known RBP	4.23	□□□□□ -1.73
PEX1	YKL197C	YNL011C	P53980	444 aa		4.23	□□□□□ -1.73
PEX1	YKL197C	AIM7	Q12156	149 aa		4.23	□□□□□ -1.73
PEX1	YKL197C	TY1B-JR2	P47100	1755 aa	Known RBP	4.22	□□□□□ -1.73
PEX1	YKL197C	TY1B-ER2	Q03619	1755 aa		4.22	□□□□□ -1.73
PEX1	YKL197C	TY1B-MR1	Q04214	1755 aa		4.22	□□□□□ -1.73
PEX1	YKL197C	TY1B-MR2	Q04670	1755 aa	Known RBP	4.22	□□□□□ -1.73
PEX1	YKL197C	TY1B-LR1	Q12088	1755 aa	Known RBP	4.22	□□□□□ -1.73
PEX1	YKL197C	TY1B-NL1	Q12112	1755 aa		4.22	□□□□□ -1.73
PEX1	YKL197C	TY1B-GR1	Q12141	1755 aa		4.22	□□□□□ -1.73
PEX1	YKL197C	TY1B-BL	Q12490	1755 aa		4.22	□□□□□ -1.73
PEX1	YKL197C	MCM1	P11746	286 aa		4.22	□□□□□ -1.73
PEX1	YKL197C	BCK2	P33306	851 aa		4.22	□□□□□ -1.73
PEX1	YKL197C	PTC2	P39966	464 aa	Known RBP	4.22	□□□□□ -1.73
PEX1	YKL197C	FPR3	P38911	411 aa	Known RBP	4.22	□□□□□ -1.73
PEX1	YKL197C	CHD1	P32657	1468 aa		4.21	□□□□□ -1.74
PEX1	YKL197C	MPP10	P47083	593 aa	Known RBP	4.21	□□□□□ -1.74
PEX1	YKL197C	PLP2	Q12017	286 aa		4.21	□□□□□ -1.74
PEX1	YKL197C	SEC9	P40357	651 aa		4.2	□□□□□ -1.74
PEX1	YKL197C	FAR11	P53917	953 aa		4.2	□□□□□ -1.74
PEX1	YKL197C	ETT1	Q08421	412 aa	Known RBP	4.2	□□□□□ -1.74
PEX1	YKL197C	MET5	P47169	1442 aa		4.2	□□□□□ -1.74
PEX1	YKL197C	MYO4	P32492	1471 aa		4.2	□□□□□ -1.74
PEX1	YKL197C	NTE1	Q04958	1679 aa		4.2	□□□□□ -1.74
PEX1	YKL197C	OSW7	P43611	510 aa		4.2	□□□□□ -1.74
PEX1	YKL197C	NOP8	Q08287	484 aa	Predicted RBP	4.2	□□□□□ -1.74
PEX1	YKL197C	BUD21	Q08492	214 aa	Predicted RBP	4.2	□□□□□ -1.74
PEX1	YKL197C	PAN1	P32521	1480 aa		4.2	□□□□□ -1.74
PEX1	YKL197C	RPO21	P04050	1733 aa	Known RBP	4.19	□□□□□ -1.74
PEX1	YKL197C	ASF1	P32447	279 aa		4.19	□□□□□ -1.74
PEX1	YKL197C	TEA1	P47988	759 aa		4.19	□□□□□ -1.74
PEX1	YKL197C	FPK1	P53739	893 aa		4.19	□□□□□ -1.74
PEX1	YKL197C	STU1	P38198	1513 aa		4.19	□□□□□ -1.74
PEX1	YKL197C	XDJ1	P39102	459 aa		4.19	□□□□□ -1.74
PEX1	YKL197C	DNF1	P32660	1571 aa		4.19	□□□□□ -1.74
PEX1	YKL197C	KEX2	P13134	814 aa		4.19	□□□□□ -1.74
PEX1	YKL197C	DOS2	P54858	310 aa		4.19	□□□□□ -1.74
PEX1	YKL197C	TY1B-A	O13527	1196 aa	Known RBP	4.18	□□□□□ -1.74
PEX1	YKL197C	RPP1B	P10622	106 aa	Known RBP	4.18	□□□□□ -1.74
PEX1	YKL197C	SCJ1	P25303	377 aa		4.17	□□□□□ -1.74
PEX1	YKL197C	PEX21	P50091	288 aa		4.17	□□□□□ -1.74
PEX1	YKL197C	YSH1	Q06224	779 aa	Predicted RBP	4.17	□□□□□ -1.74
PEX1	YKL197C	CLB5	P30283	435 aa		4.17	□□□□□ -1.74
PEX1	YKL197C	SPC110	P32380	944 aa		4.17	□□□□□ -1.74
PEX1	YKL197C	RSC30	P38781	883 aa		4.17	□□□□□ -1.74
PEX1	YKL197C	KIP3	P53086	805 aa	Known RBP	4.17	□□□□□ -1.74
PEX1	YKL197C	PIL1	P53252	339 aa	Known RBP	4.17	□□□□□ -1.74
PEX1	YKL197C	MMS22	Q06164	1454 aa		4.17	□□□□□ -1.74
PEX1	YKL197C	YML020W	Q03722	664 aa		4.16	□□□□□ -1.74
PEX1	YKL197C	KIN1	P13185	1064 aa		4.16	□□□□□ -1.74
PEX1	YKL197C	SSF1	P38789	453 aa	Predicted RBP	4.16	□□□□□ -1.74
PEX1	YKL197C	NMD2	P38798	1089 aa	Known RBP	4.16	□□□□□ -1.74
PEX1	YKL197C	ZDS1	P50111	915 aa	Known RBP	4.16	□□□□□ -1.74
PEX1	YKL197C	HST2	P53686	357 aa		4.16	□□□□□ -1.74
PEX1	YKL197C	CEF1	Q03654	590 aa	Predicted RBP	4.16	□□□□□ -1.74
PEX1	YKL197C	BRE1	Q07457	700 aa	Known RBP	4.16	□□□□□ -1.74
PEX1	YKL197C	PRT1	P06103	763 aa	Known RBP	4.15	□□□□□ -1.74
PEX1	YKL197C	MOD5	P07884	428 aa		4.15	□□□□□ -1.74
PEX1	YKL197C	MLP2	P40457	1679 aa		4.15	□□□□□ -1.74
PEX1	YKL197C	YRF1-1	P0CX20	1796 aa		4.15	□□□□□ -1.75
PEX1	YKL197C	YRF1-5	P0CX21	1796 aa		4.15	□□□□□ -1.75
PEX1	YKL197C	YRF1-8	P0CX22	1796 aa		4.15	□□□□□ -1.75
PEX1	YKL197C	GUA1	P38625	525 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms