RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W FRA1Q07825 749 aa3.86□□□□□ -1.79
SNU114YKL173W SPT5P27692 1063 aaKnown RBP3.85□□□□□ -1.79
SNU114YKL173W BRL1P38770 471 aa3.85□□□□□ -1.79
SNU114YKL173W MSB3P48566 633 aaPredicted RBP3.84□□□□□ -1.79
SNU114YKL173W YDJ1P25491 409 aaKnown RBP3.84□□□□□ -1.79
SNU114YKL173W YBL086CP38177 466 aa3.84□□□□□ -1.8
SNU114YKL173W RTT106P40161 455 aa3.83□□□□□ -1.8
SNU114YKL173W MON2P48563 1636 aaPredicted RBP3.83□□□□□ -1.8
SNU114YKL173W TEC1P18412 486 aa3.82□□□□□ -1.8
SNU114YKL173W RDS2P19541 446 aaKnown RBP3.82□□□□□ -1.8
SNU114YKL173W RIM21P48565 533 aa3.82□□□□□ -1.8
SNU114YKL173W ITT1Q04638 464 aa3.82□□□□□ -1.8
SNU114YKL173W MRX10Q05648 414 aa3.81□□□□□ -1.8
SNU114YKL173W MCM16Q12262 181 aa3.81□□□□□ -1.8
SNU114YKL173W IXR1P33417 597 aa3.81□□□□□ -1.8
SNU114YKL173W ASH1P34233 588 aa3.81□□□□□ -1.8
SNU114YKL173W YBL036CP38197 257 aa3.81□□□□□ -1.8
SNU114YKL173W ENO2P00925 437 aaKnown RBP3.8□□□□□ -1.8
SNU114YKL173W ATG32P40458 529 aa3.8□□□□□ -1.8
SNU114YKL173W BIM1P40013 344 aa3.8□□□□□ -1.8
SNU114YKL173W MRX12P47084 519 aa3.8□□□□□ -1.8
SNU114YKL173W KIP2P28743 706 aa3.79□□□□□ -1.8
SNU114YKL173W GUT2P32191 649 aa3.79□□□□□ -1.8
SNU114YKL173W BRE2P43132 505 aa3.79□□□□□ -1.8
SNU114YKL173W TIF1P10081 395 aaKnown RBP3.78□□□□□ -1.8
SNU114YKL173W STE6P12866 1290 aa3.78□□□□□ -1.8
SNU114YKL173W UTP13Q05946 817 aaKnown RBP3.78□□□□□ -1.8
SNU114YKL173W PEP12P32854 288 aa3.78□□□□□ -1.8
SNU114YKL173W EMP47P43555 445 aa3.78□□□□□ -1.8
SNU114YKL173W YJR115WP47152 169 aa3.78□□□□□ -1.8
SNU114YKL173W FBP26P32604 452 aa3.78□□□□□ -1.8
SNU114YKL173W YNL108CP53929 270 aa3.78□□□□□ -1.8
SNU114YKL173W STE20Q03497 939 aaKnown RBP3.78□□□□□ -1.8
SNU114YKL173W APP1P53933 587 aa3.77□□□□□ -1.81
SNU114YKL173W ISF1P32488 338 aa3.77□□□□□ -1.81
SNU114YKL173W HAL5P38970 855 aaKnown RBP3.77□□□□□ -1.81
SNU114YKL173W YJL007CP47080 104 aa3.77□□□□□ -1.81
SNU114YKL173W ISU1Q03020 165 aa3.76□□□□□ -1.81
SNU114YKL173W PTK2P47116 818 aaKnown RBP3.76□□□□□ -1.81
SNU114YKL173W ENV9Q08651 330 aa3.76□□□□□ -1.81
SNU114YKL173W MET22P32179 357 aa3.75□□□□□ -1.81
SNU114YKL173W YPP1P46951 817 aa3.75□□□□□ -1.81
SNU114YKL173W SPT2P06843 333 aaPredicted RBP3.75□□□□□ -1.81
SNU114YKL173W HST3P53687 447 aa3.75□□□□□ -1.81
SNU114YKL173W ATG20Q07528 640 aa3.75□□□□□ -1.81
SNU114YKL173W ENO1P00924 437 aaKnown RBP3.74□□□□□ -1.81
SNU114YKL173W AAD14P42884 376 aa3.74□□□□□ -1.81
SNU114YKL173W HGH1P48362 394 aaKnown RBP3.74□□□□□ -1.81
SNU114YKL173W LCB5Q06147 687 aaKnown RBP3.74□□□□□ -1.81
SNU114YKL173W YDL176WQ12027 708 aa3.74□□□□□ -1.81
SNU114YKL173W UGA3P26370 528 aa3.73□□□□□ -1.81
SNU114YKL173W NUP85P46673 744 aa3.73□□□□□ -1.81
SNU114YKL173W GCR2Q01722 534 aa3.73□□□□□ -1.81
SNU114YKL173W VTC4P47075 721 aa3.73□□□□□ -1.81
SNU114YKL173W RTG2P32608 588 aaKnown RBP3.72□□□□□ -1.81
SNU114YKL173W MKS1P34072 584 aa3.72□□□□□ -1.81
SNU114YKL173W ISR1Q06098 443 aaKnown RBP3.72□□□□□ -1.81
SNU114YKL173W OPT2Q06593 877 aa3.71□□□□□ -1.81
SNU114YKL173W ACO2P39533 789 aa3.71□□□□□ -1.82
SNU114YKL173W DFG5Q05031 458 aa3.71□□□□□ -1.82
SNU114YKL173W TY1A-BLQ12266 440 aa3.71□□□□□ -1.82
SNU114YKL173W SLX8P40072 274 aa3.7□□□□□ -1.82
SNU114YKL173W YJR098CP47139 656 aa3.7□□□□□ -1.82
SNU114YKL173W YDR444WQ04093 687 aa3.7□□□□□ -1.82
SNU114YKL173W SOH1P38633 127 aa3.7□□□□□ -1.82
SNU114YKL173W SSN3P39073 555 aa3.7□□□□□ -1.82
SNU114YKL173W YPQ2Q06328 317 aa3.7□□□□□ -1.82
SNU114YKL173W HDA3Q06623 655 aa3.7□□□□□ -1.82
SNU114YKL173W DAL1P32375 460 aa3.7□□□□□ -1.82
SNU114YKL173W SLA1P32790 1244 aa3.7□□□□□ -1.82
SNU114YKL173W GLY1P37303 387 aaKnown RBP3.7□□□□□ -1.82
SNU114YKL173W ARG82P07250 355 aa3.69□□□□□ -1.82
SNU114YKL173W TTI1P36097 1038 aa3.69□□□□□ -1.82
SNU114YKL173W NOP8Q08287 484 aaPredicted RBP3.69□□□□□ -1.82
SNU114YKL173W BDS1Q08347 646 aa3.69□□□□□ -1.82
SNU114YKL173W SIS2P36024 562 aa3.68□□□□□ -1.82
SNU114YKL173W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
SNU114YKL173W ATG3P40344 310 aa3.68□□□□□ -1.82
SNU114YKL173W MSN5P52918 1224 aa3.68□□□□□ -1.82
SNU114YKL173W TY1A-DR3Q12441 440 aa3.68□□□□□ -1.82
SNU114YKL173W YML020WQ03722 664 aa3.68□□□□□ -1.82
SNU114YKL173W WTM2Q12206 467 aa3.68□□□□□ -1.82
SNU114YKL173W CCP1P00431 361 aa3.67□□□□□ -1.82
SNU114YKL173W RGA1P39083 1007 aa3.67□□□□□ -1.82
SNU114YKL173W TSC13Q99190 310 aa3.67□□□□□ -1.82
SNU114YKL173W DLD1P32891 587 aa3.66□□□□□ -1.82
SNU114YKL173W ORC1P54784 914 aaPredicted RBP3.66□□□□□ -1.82
SNU114YKL173W UBP1P25037 809 aa3.66□□□□□ -1.82
SNU114YKL173W OSH7P38755 437 aa3.66□□□□□ -1.82
SNU114YKL173W SUM1P46676 1062 aa3.66□□□□□ -1.82
SNU114YKL173W LSC2P53312 427 aa3.66□□□□□ -1.82
SNU114YKL173W YPL062WQ02781 134 aa3.66□□□□□ -1.82
SNU114YKL173W SUB2Q07478 446 aaKnown RBP3.66□□□□□ -1.82
SNU114YKL173W YPR204WQ08995 1032 aa3.66□□□□□ -1.82
SNU114YKL173W RPS31P05759 152 aaKnown RBP3.65□□□□□ -1.82
SNU114YKL173W SWI5P08153 709 aa3.65□□□□□ -1.82
SNU114YKL173W CDC19P00549 500 aaKnown RBP3.65□□□□□ -1.83
SNU114YKL173W PUP1P25043 261 aa3.65□□□□□ -1.83
SNU114YKL173W UTR2P32623 467 aa3.65□□□□□ -1.83
SNU114YKL173W AIM9P40053 627 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms