RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	TAF7	Q05021	590 aa		4.81	□□□□□ -1.64
SOD1	YJR104C	COB	P00163	385 aa		4.8	□□□□□ -1.64
SOD1	YJR104C	TOS1	P38288	455 aa		4.79	□□□□□ -1.64
SOD1	YJR104C	VPS70	P47161	811 aa		4.79	□□□□□ -1.64
SOD1	YJR104C	MSB3	P48566	633 aa	Predicted RBP	4.79	□□□□□ -1.64
SOD1	YJR104C	TIF6	Q12522	245 aa	Known RBP	4.79	□□□□□ -1.64
SOD1	YJR104C	YMR084W	A2P2R3	262 aa		4.78	□□□□□ -1.64
SOD1	YJR104C	SPB4	P25808	606 aa	Predicted RBP	4.78	□□□□□ -1.64
SOD1	YJR104C	TAF5	P38129	798 aa		4.78	□□□□□ -1.64
SOD1	YJR104C	TIF4632	P39936	914 aa	Known RBP	4.78	□□□□□ -1.64
SOD1	YJR104C	NCS6	P53088	359 aa		4.78	□□□□□ -1.64
SOD1	YJR104C	THS1	P04801	734 aa	Known RBP	4.77	□□□□□ -1.65
SOD1	YJR104C	ERT1	P38140	529 aa		4.77	□□□□□ -1.65
SOD1	YJR104C	SLI15	P38283	698 aa		4.77	□□□□□ -1.65
SOD1	YJR104C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	RIP-Chip
SOD1	YJR104C	BUD21	Q08492	214 aa	Predicted RBP	4.77	□□□□□ -1.65
SOD1	YJR104C	NUP192	P47054	1683 aa		4.77	□□□□□ -1.65
SOD1	YJR104C	YKL222C	P35995	705 aa		4.76	□□□□□ -1.65
SOD1	YJR104C	VPS29	P38759	282 aa		4.76	□□□□□ -1.65
SOD1	YJR104C	VHR2	P40041	505 aa		4.76	□□□□□ -1.65
SOD1	YJR104C	COQ8	P27697	501 aa		4.75	□□□□□ -1.65
SOD1	YJR104C	DLD1	P32891	587 aa		4.75	□□□□□ -1.65
SOD1	YJR104C	YPR148C	Q06523	435 aa		4.75	□□□□□ -1.65
SOD1	YJR104C	RET1	P22276	1149 aa	Known RBP	4.74	□□□□□ -1.65
SOD1	YJR104C	YIL089W	P40500	205 aa		4.74	□□□□□ -1.65
SOD1	YJR104C	NYV1	Q12255	253 aa		4.74	□□□□□ -1.65
SOD1	YJR104C	DBP1	P24784	617 aa	Known RBP	4.73	□□□□□ -1.65
SOD1	YJR104C	SIS2	P36024	562 aa		4.73	□□□□□ -1.65
SOD1	YJR104C	YKL133C	P36066	463 aa		4.73	□□□□□ -1.65
SOD1	YJR104C	CWH41	P53008	833 aa		4.73	□□□□□ -1.65
SOD1	YJR104C	TCB1	Q12466	1186 aa		4.73	□□□□□ -1.65
SOD1	YJR104C	RTG2	P32608	588 aa	Known RBP	4.72	□□□□□ -1.65
SOD1	YJR104C	RPN1	P38764	993 aa	Known RBP	4.72	□□□□□ -1.65
SOD1	YJR104C	YOR238W	Q08634	303 aa		4.72	□□□□□ -1.65
SOD1	YJR104C	TUM1	Q08686	304 aa	Known RBP	4.72	□□□□□ -1.65
SOD1	YJR104C	YRF1-4	O13559	1382 aa		4.72	□□□□□ -1.65
SOD1	YJR104C	STS1	P38637	319 aa		4.71	□□□□□ -1.66
SOD1	YJR104C	CAB1	Q04430	367 aa		4.71	□□□□□ -1.66
SOD1	YJR104C	YAP5	P40574	245 aa		4.7	□□□□□ -1.66
SOD1	YJR104C	UTP22	P53254	1237 aa	Predicted RBP	4.7	□□□□□ -1.66
SOD1	YJR104C	NOP53	Q12080	455 aa	Known RBP	4.7	□□□□□ -1.66
SOD1	YJR104C	BUG1	Q12191	341 aa		4.7	□□□□□ -1.66
SOD1	YJR104C	YRF1-3	P0CX14	1859 aa		4.7	□□□□□ -1.66
SOD1	YJR104C	YRF1-7	P0CX15	1859 aa		4.7	□□□□□ -1.66
SOD1	YJR104C	YRF1-6	P53819	1859 aa		4.7	□□□□□ -1.66
SOD1	YJR104C	TGL3	P40308	642 aa		4.69	□□□□□ -1.66
SOD1	YJR104C	TY4B-H	P0C2J7	1802 aa		4.68	□□□□□ -1.66
SOD1	YJR104C	TY4B-J	P47024	1803 aa		4.68	□□□□□ -1.66
SOD1	YJR104C	CPS1	P27614	576 aa		4.68	□□□□□ -1.66
SOD1	YJR104C	CLA4	P48562	842 aa		4.68	□□□□□ -1.66
SOD1	YJR104C	ATG20	Q07528	640 aa		4.68	□□□□□ -1.66
SOD1	YJR104C	MSB4	Q12317	492 aa		4.68	□□□□□ -1.66
SOD1	YJR104C	PBS2	P08018	668 aa		4.67	□□□□□ -1.66
SOD1	YJR104C	CUP1-1	P0CX80	61 aa		4.67	□□□□□ -1.66
SOD1	YJR104C	CUP1-2	P0CX81	61 aa		4.67	□□□□□ -1.66
SOD1	YJR104C	HPC2	Q01448	625 aa		4.67	□□□□□ -1.66
SOD1	YJR104C	TYW1	Q08960	810 aa	Known RBP	4.67	□□□□□ -1.66
SOD1	YJR104C	YLL066C	Q99208	1374 aa		4.66	□□□□□ -1.66
SOD1	YJR104C	FBP1	P09201	348 aa		4.66	□□□□□ -1.66
SOD1	YJR104C	GAP1	P19145	602 aa	Predicted RBP	4.66	□□□□□ -1.66
SOD1	YJR104C	EDS1	P38073	919 aa		4.66	□□□□□ -1.66
SOD1	YJR104C	RPS9B	P05755	195 aa	Known RBP	4.65	□□□□□ -1.67
SOD1	YJR104C	DSF2	P38213	736 aa		4.65	□□□□□ -1.67
SOD1	YJR104C	SLM3	Q12093	417 aa		4.65	□□□□□ -1.67
SOD1	YJR104C	APC1	P53886	1748 aa		4.64	□□□□□ -1.67
SOD1	YJR104C	HVG1	P0CE11	249 aa		4.64	□□□□□ -1.67
SOD1	YJR104C	PTC3	P34221	468 aa	Known RBP	4.64	□□□□□ -1.67
SOD1	YJR104C	RRT14	P40470	206 aa		4.64	□□□□□ -1.67
SOD1	YJR104C	REF2	P42073	533 aa	Predicted RBP	4.64	□□□□□ -1.67
SOD1	YJR104C	RIX7	Q07844	837 aa	Known RBP	4.64	□□□□□ -1.67
SOD1	YJR104C	TEL1	P38110	2787 aa		4.63	□□□□□ -1.67
SOD1	YJR104C	TOP1	P04786	769 aa		4.63	□□□□□ -1.67
SOD1	YJR104C	ENP1	P38333	483 aa	Known RBP	4.63	□□□□□ -1.67
SOD1	YJR104C	EAR1	Q03212	550 aa		4.63	□□□□□ -1.67
SOD1	YJR104C	MAM3	Q12296	706 aa		4.63	□□□□□ -1.67
SOD1	YJR104C	TAO3	P40468	2376 aa		4.63	□□□□□ -1.67
SOD1	YJR104C	ADE6	P38972	1358 aa	Known RBP	4.63	□□□□□ -1.67
SOD1	YJR104C	RAD4	P14736	754 aa		4.62	□□□□□ -1.67
SOD1	YJR104C	VMA1	P17255	1071 aa	Known RBP	4.62	□□□□□ -1.67
SOD1	YJR104C	ALD4	P46367	519 aa	Known RBP	4.62	□□□□□ -1.67
SOD1	YJR104C	TOR2	P32600	2474 aa	Known RBP	4.62	□□□□□ -1.67
SOD1	YJR104C	MOT2	P34909	587 aa	Known RBP	4.61	□□□□□ -1.67
SOD1	YJR104C	BSD2	P38356	321 aa		4.61	□□□□□ -1.67
SOD1	YJR104C	SHC1	P39000	512 aa		4.61	□□□□□ -1.67
SOD1	YJR104C	ATH1	P48016	1211 aa		4.61	□□□□□ -1.67
SOD1	YJR104C	CHZ1	P40019	153 aa	Predicted RBP	4.6	□□□□□ -1.67
SOD1	YJR104C	PEA2	P40091	420 aa		4.6	□□□□□ -1.67
SOD1	YJR104C	GRE2	Q12068	342 aa	Known RBP	4.6	□□□□□ -1.67
SOD1	YJR104C	FRK1	Q03002	865 aa	Predicted RBP	4.59	□□□□□ -1.67
SOD1	YJR104C	MAK21	Q12176	1025 aa	Known RBP	4.59	□□□□□ -1.67
SOD1	YJR104C	YDR034W-B	Q6Q5X2	51 aa		4.59	□□□□□ -1.67
SOD1	YJR104C	FIG2	P25653	1609 aa		4.58	□□□□□ -1.68
SOD1	YJR104C	YNR021W	P53723	404 aa	Known RBP	4.58	□□□□□ -1.68
SOD1	YJR104C	GUT1	P32190	709 aa		4.57	□□□□□ -1.68
SOD1	YJR104C	MNN4	P36044	1178 aa		4.57	□□□□□ -1.68
SOD1	YJR104C	XKS1	P42826	600 aa		4.57	□□□□□ -1.68
SOD1	YJR104C	DMA2	P53924	522 aa		4.57	□□□□□ -1.68
SOD1	YJR104C	ATG13	Q06628	738 aa		4.57	□□□□□ -1.68
SOD1	YJR104C	YLR419W	Q06698	1435 aa	Known RBP	4.56	□□□□□ -1.68
SOD1	YJR104C	YLL067C	Q07888	1374 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms