RNA–Protein interactions for RNA: YHR149C

SKG6, Transcript of Integral membrane protein, yeastyeast

Gene SKG6, Length 2,205 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKG6YHR149C RNT1Q02555 471 aa5.07□□□□□ -1.6
SKG6YHR149C NOP14Q99207 810 aaKnown RBP5.07□□□□□ -1.6
SKG6YHR149C LSP1Q12230 341 aaKnown RBP5.06□□□□□ -1.6
SKG6YHR149C RVB2Q12464 471 aaKnown RBP5.06□□□□□ -1.6
SKG6YHR149C SAP190P36123 1033 aa5.05□□□□□ -1.6
SKG6YHR149C VPS27P40343 622 aaKnown RBP5.05□□□□□ -1.6
SKG6YHR149C TEA1P47988 759 aa5.05□□□□□ -1.6
SKG6YHR149C TFC8Q12308 588 aa5.05□□□□□ -1.6
SKG6YHR149C SWI3P32591 825 aa5.05□□□□□ -1.6
SKG6YHR149C PAP2P53632 584 aaKnown RBP5.04□□□□□ -1.6
SKG6YHR149C HOS3Q02959 697 aaKnown RBP5.04□□□□□ -1.6
SKG6YHR149C RPP0P05317 312 aaKnown RBP5.04□□□□□ -1.6
SKG6YHR149C SCY1P53009 804 aa5.04□□□□□ -1.6
SKG6YHR149C RSC1P53236 928 aa5.04□□□□□ -1.6
SKG6YHR149C LCD1Q04377 747 aa5.04□□□□□ -1.6
SKG6YHR149C DCD1P06773 312 aa5.03□□□□□ -1.6
SKG6YHR149C HOP09932 586 aa5.03□□□□□ -1.6
SKG6YHR149C SPB4P25808 606 aaPredicted RBP5.03□□□□□ -1.6
SKG6YHR149C NUP192P47054 1683 aa5.03□□□□□ -1.6
SKG6YHR149C RAD51P25454 400 aa5.03□□□□□ -1.6
SKG6YHR149C SLX5P32828 619 aaKnown RBP5.03□□□□□ -1.6
SKG6YHR149C VPS72Q03388 795 aa5.03□□□□□ -1.6
SKG6YHR149C UTP13Q05946 817 aaKnown RBP5.03□□□□□ -1.6
SKG6YHR149C YRF1-2P40105 1681 aa5.02□□□□□ -1.61
SKG6YHR149C RRP14P36080 434 aaKnown RBP5.02□□□□□ -1.61
SKG6YHR149C THI12P42883 340 aa5.02□□□□□ -1.61
SKG6YHR149C THI5P43534 340 aa5.02□□□□□ -1.61
SKG6YHR149C THI11P47183 340 aa5.02□□□□□ -1.61
SKG6YHR149C RRP15Q06511 250 aaPredicted RBP5.02□□□□□ -1.61
SKG6YHR149C THI13Q07748 340 aa5.02□□□□□ -1.61
SKG6YHR149C BUD21Q08492 214 aaPredicted RBP5.02□□□□□ -1.61
SKG6YHR149C RAD9P14737 1309 aa5.02□□□□□ -1.61
SKG6YHR149C ORC1P54784 914 aaPredicted RBP5.01□□□□□ -1.61
SKG6YHR149C YAH1Q12184 172 aaKnown RBP5.01□□□□□ -1.61
SKG6YHR149C PET111P08468 800 aa5.01□□□□□ -1.61
SKG6YHR149C RIM101P33400 625 aa5.01□□□□□ -1.61
SKG6YHR149C SWH1P35845 1188 aa5.01□□□□□ -1.61
SKG6YHR149C SNU71P53207 620 aaKnown RBP5.01□□□□□ -1.61
SKG6YHR149C PDS5Q04264 1277 aa5.01□□□□□ -1.61
SKG6YHR149C VPS30Q02948 557 aa5□□□□□ -1.61
SKG6YHR149C COG8Q04632 607 aa5□□□□□ -1.61
SKG6YHR149C BCK1Q01389 1478 aa5□□□□□ -1.61
SKG6YHR149C MDG1P53885 366 aa5□□□□□ -1.61
SKG6YHR149C TLG1Q03322 224 aa5□□□□□ -1.61
SKG6YHR149C ERV41Q04651 352 aa5□□□□□ -1.61
SKG6YHR149C YVC1Q12324 675 aa5□□□□□ -1.61
SKG6YHR149C SFI1Q12369 946 aa5□□□□□ -1.61
SKG6YHR149C YOL087CQ99247 1116 aa5□□□□□ -1.61
SKG6YHR149C MDM38Q08179 573 aa4.99□□□□□ -1.61
SKG6YHR149C MCM2P29469 868 aa4.99□□□□□ -1.61
SKG6YHR149C ZUO1P32527 433 aaKnown RBP4.99□□□□□ -1.61
SKG6YHR149C PUS1Q12211 544 aaKnown RBP4.99□□□□□ -1.61
SKG6YHR149C PSE1P32337 1089 aaKnown RBP4.98□□□□□ -1.61
SKG6YHR149C BDP1P46678 594 aa4.98□□□□□ -1.61
SKG6YHR149C YGL140CP53120 1219 aa4.98□□□□□ -1.61
SKG6YHR149C ITC1P53125 1264 aa4.98□□□□□ -1.61
SKG6YHR149C MRS2Q01926 470 aa4.98□□□□□ -1.61
SKG6YHR149C APL5Q08951 932 aaKnown RBP4.98□□□□□ -1.61
SKG6YHR149C TOP1P04786 769 aa4.97□□□□□ -1.61
SKG6YHR149C RAD3P06839 778 aa4.97□□□□□ -1.61
SKG6YHR149C RSC8P43609 557 aaKnown RBP4.97□□□□□ -1.61
SKG6YHR149C YMR102CQ03177 834 aa4.97□□□□□ -1.61
SKG6YHR149C SEC39Q12745 709 aa4.97□□□□□ -1.61
SKG6YHR149C SPT5P27692 1063 aaKnown RBP4.97□□□□□ -1.61
SKG6YHR149C TYS1P36421 394 aaKnown RBP4.97□□□□□ -1.61
SKG6YHR149C STU2P46675 888 aa4.97□□□□□ -1.61
SKG6YHR149C YNL050CP53952 270 aa4.97□□□□□ -1.61
SKG6YHR149C HAP5Q02516 242 aa4.97□□□□□ -1.61
SKG6YHR149C MIC60P36112 540 aa4.96□□□□□ -1.62
SKG6YHR149C RKM3P38222 552 aa4.96□□□□□ -1.62
SKG6YHR149C RTT107P38850 1070 aa4.96□□□□□ -1.62
SKG6YHR149C YMR124WP39523 943 aaKnown RBP4.96□□□□□ -1.62
SKG6YHR149C RPC82P32349 654 aa4.96□□□□□ -1.62
SKG6YHR149C PUP2P32379 260 aa4.96□□□□□ -1.62
SKG6YHR149C CEP3P40969 608 aa4.96□□□□□ -1.62
SKG6YHR149C YMR1P47147 688 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
SKG6YHR149C NOP7P53261 605 aaKnown RBP4.96□□□□□ -1.62
SKG6YHR149C PXR1P53335 271 aaPredicted RBP4.96□□□□□ -1.62
SKG6YHR149C SML1Q04964 104 aa4.96□□□□□ -1.62
SKG6YHR149C YLL054CQ12244 843 aa4.96□□□□□ -1.62
SKG6YHR149C HIF1Q12373 385 aa4.96□□□□□ -1.62
SKG6YHR149C NHA1Q99271 985 aa4.96□□□□□ -1.62
SKG6YHR149C KAR3P17119 729 aa4.95□□□□□ -1.62
SKG6YHR149C ALD3P54114 506 aa4.95□□□□□ -1.62
SKG6YHR149C MGA2P40578 1113 aa4.95□□□□□ -1.62
SKG6YHR149C GDT1P38301 280 aaPredicted RBP4.94□□□□□ -1.62
SKG6YHR149C NDC80P40460 691 aa4.94□□□□□ -1.62
SKG6YHR149C RRP5Q05022 1729 aaKnown RBP4.93□□□□□ -1.62
SKG6YHR149C SUP35P05453 685 aaKnown RBP4.93□□□□□ -1.62
SKG6YHR149C SSA1P10591 642 aaKnown RBP4.93□□□□□ -1.62
SKG6YHR149C SSA2P10592 639 aaKnown RBP4.93□□□□□ -1.62
SKG6YHR149C VPS41P38959 992 aa4.93□□□□□ -1.62
SKG6YHR149C PTP3P40048 928 aa4.93□□□□□ -1.62
SKG6YHR149C RIO2P40160 425 aaKnown RBP4.93□□□□□ -1.62
SKG6YHR149C YDL144CQ07589 356 aa4.93□□□□□ -1.62
SKG6YHR149C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.93□□□□□ -1.62not detected
SKG6YHR149C TY1B-AO13527 1196 aaKnown RBP4.93□□□□□ -1.62
SKG6YHR149C CYC8P14922 966 aa4.93□□□□□ -1.62
SKG6YHR149C TOA1P32773 286 aa4.93□□□□□ -1.62
SKG6YHR149C PEA2P40091 420 aa4.93□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms