RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeastyeast

Gene PXR1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXR1YGR280C COBP00163 385 aa6.61□□□□□ -1.35
PXR1YGR280C DPS1P04802 557 aaKnown RBP6.61□□□□□ -1.35
PXR1YGR280C YER156CP40093 338 aaKnown RBP6.61□□□□□ -1.35
PXR1YGR280C TFG1P41895 735 aaPredicted RBP6.61□□□□□ -1.35
PXR1YGR280C MSB3P48566 633 aaPredicted RBP6.61□□□□□ -1.35
PXR1YGR280C NUP192P47054 1683 aa6.6□□□□□ -1.35
PXR1YGR280C MSN5P52918 1224 aa6.59□□□□□ -1.35
PXR1YGR280C TCB1Q12466 1186 aa6.59□□□□□ -1.35
PXR1YGR280C FKS3Q04952 1785 aa6.59□□□□□ -1.35
PXR1YGR280C ENP1P38333 483 aaKnown RBP6.57□□□□□ -1.36
PXR1YGR280C CTT1P06115 562 aa6.56□□□□□ -1.36
PXR1YGR280C YKL133CP36066 463 aa6.56□□□□□ -1.36
PXR1YGR280C YKR075CP36155 307 aa6.56□□□□□ -1.36
PXR1YGR280C AI2P03876 854 aa6.55□□□□□ -1.36
PXR1YGR280C SNF2P22082 1703 aa6.54□□□□□ -1.36
PXR1YGR280C VRP1P37370 817 aa6.54□□□□□ -1.36
PXR1YGR280C ETP1P38748 585 aaKnown RBP6.54□□□□□ -1.36
PXR1YGR280C YRF1-4O13559 1382 aa6.54□□□□□ -1.36
PXR1YGR280C SRC1Q03707 834 aa6.53□□□□□ -1.36
PXR1YGR280C YDL129WQ07555 291 aa6.53□□□□□ -1.36
PXR1YGR280C POM152P39685 1337 aa6.52□□□□□ -1.37
PXR1YGR280C CPS1P27614 576 aa6.52□□□□□ -1.37
PXR1YGR280C SLI15P38283 698 aa6.52□□□□□ -1.37
PXR1YGR280C ALD4P46367 519 aaKnown RBP6.52□□□□□ -1.37
PXR1YGR280C HPC2Q01448 625 aa6.52□□□□□ -1.37
PXR1YGR280C YLR278CQ05854 1341 aa6.51□□□□□ -1.37
PXR1YGR280C FPK1P53739 893 aa6.51□□□□□ -1.37
PXR1YGR280C TY4B-HP0C2J7 1802 aa6.5□□□□□ -1.37
PXR1YGR280C TY4B-JP47024 1803 aa6.5□□□□□ -1.37
PXR1YGR280C BUG1Q12191 341 aa6.5□□□□□ -1.37
PXR1YGR280C MHP1P43638 1398 aa6.49□□□□□ -1.37
PXR1YGR280C THS1P04801 734 aaKnown RBP6.48□□□□□ -1.37
PXR1YGR280C NAP1P25293 417 aaKnown RBP6.48□□□□□ -1.37
PXR1YGR280C YKL222CP35995 705 aa6.48□□□□□ -1.37
PXR1YGR280C RRT14P40470 206 aa6.48□□□□□ -1.37
PXR1YGR280C RSM7P47150 247 aa6.48□□□□□ -1.37
PXR1YGR280C DAN4P47179 1161 aa6.48□□□□□ -1.37
PXR1YGR280C RCM1P53972 490 aa6.48□□□□□ -1.37
PXR1YGR280C CWH41P53008 833 aa6.47□□□□□ -1.37
PXR1YGR280C KIN4Q01919 800 aa6.47□□□□□ -1.37
PXR1YGR280C TOS1P38288 455 aa6.46□□□□□ -1.38
PXR1YGR280C SLM3Q12093 417 aa6.46□□□□□ -1.38
PXR1YGR280C PAM1P37304 830 aaKnown RBP6.45□□□□□ -1.38
PXR1YGR280C MAL31P38156 614 aa6.45□□□□□ -1.38
PXR1YGR280C TOP1P04786 769 aa6.44□□□□□ -1.38
PXR1YGR280C CHZ1P40019 153 aaPredicted RBP6.44□□□□□ -1.38
PXR1YGR280C VHR2P40041 505 aa6.44□□□□□ -1.38
PXR1YGR280C YRF1-3P0CX14 1859 aa6.44□□□□□ -1.38
PXR1YGR280C YRF1-7P0CX15 1859 aa6.44□□□□□ -1.38
PXR1YGR280C YRF1-6P53819 1859 aa6.44□□□□□ -1.38
PXR1YGR280C UTP22P53254 1237 aaPredicted RBP6.43□□□□□ -1.38
PXR1YGR280C XKS1P42826 600 aa6.42□□□□□ -1.38
PXR1YGR280C SRF1Q12516 437 aa6.42□□□□□ -1.38
PXR1YGR280C RET1P22276 1149 aaKnown RBP6.41□□□□□ -1.38
PXR1YGR280C FRK1Q03002 865 aaPredicted RBP6.41□□□□□ -1.38
PXR1YGR280C JIP4Q03361 876 aa6.41□□□□□ -1.38
PXR1YGR280C NYV1Q12255 253 aa6.41□□□□□ -1.38
PXR1YGR280C TIF6Q12522 245 aaKnown RBP6.41□□□□□ -1.38
PXR1YGR280C YPR117WQ06116 2489 aa6.41□□□□□ -1.38
PXR1YGR280C ERT1P38140 529 aa6.4□□□□□ -1.38
PXR1YGR280C YVH1Q02256 364 aaKnown RBP6.39□□□□□ -1.39
PXR1YGR280C PPH3P32345 308 aa6.38□□□□□ -1.39
PXR1YGR280C RTG2P32608 588 aaKnown RBP6.38□□□□□ -1.39
PXR1YGR280C PAF1P38351 445 aa6.38□□□□□ -1.39
PXR1YGR280C ADE6P38972 1358 aaKnown RBP6.38□□□□□ -1.39
PXR1YGR280C RAV1P47104 1357 aa6.37□□□□□ -1.39
PXR1YGR280C RIX7Q07844 837 aaKnown RBP6.37□□□□□ -1.39
PXR1YGR280C MEC3Q02574 474 aa6.36□□□□□ -1.39
PXR1YGR280C GRE2Q12068 342 aaKnown RBP6.36□□□□□ -1.39
PXR1YGR280C APC1P53886 1748 aa6.36□□□□□ -1.39
PXR1YGR280C NCS6P53088 359 aa6.35□□□□□ -1.39
PXR1YGR280C ATG20Q07528 640 aa6.35□□□□□ -1.39
PXR1YGR280C VPS13Q07878 3144 aa6.34□□□□□ -1.39
PXR1YGR280C RAD4P14736 754 aa6.34□□□□□ -1.39
PXR1YGR280C YIL089WP40500 205 aa6.34□□□□□ -1.39
PXR1YGR280C TAF8Q03750 510 aa6.34□□□□□ -1.39
PXR1YGR280C YDR344CQ05510 147 aa6.34□□□□□ -1.39
PXR1YGR280C TUM1Q08686 304 aaKnown RBP6.34□□□□□ -1.39
PXR1YGR280C CSE4P36012 229 aa6.33□□□□□ -1.4
PXR1YGR280C SAM3Q08986 587 aa6.33□□□□□ -1.4
PXR1YGR280C SSP1P38871 571 aa6.32□□□□□ -1.4
PXR1YGR280C RPS9BP05755 195 aaKnown RBP6.31□□□□□ -1.4
PXR1YGR280C ATG13Q06628 738 aa6.31□□□□□ -1.4
PXR1YGR280C VMA1P17255 1071 aaKnown RBP6.3□□□□□ -1.4
PXR1YGR280C AIM7Q12156 149 aa6.3□□□□□ -1.4
PXR1YGR280C ICL1P28240 557 aaPredicted RBP6.29□□□□□ -1.4
PXR1YGR280C ADE16P54113 591 aaKnown RBP6.29□□□□□ -1.4
PXR1YGR280C YLR419WQ06698 1435 aaKnown RBP6.29□□□□□ -1.4
PXR1YGR280C RTC1Q08281 1341 aa6.28□□□□□ -1.4
PXR1YGR280C RPS24AP0CX31 135 aaKnown RBP6.28□□□□□ -1.4
PXR1YGR280C RPS24BP0CX32 135 aaKnown RBP6.28□□□□□ -1.4
PXR1YGR280C SHC1P39000 512 aa6.28□□□□□ -1.4
PXR1YGR280C YLR271WQ06152 274 aa6.28□□□□□ -1.4
PXR1YGR280C GAP1P19145 602 aaPredicted RBP6.27□□□□□ -1.41
PXR1YGR280C SMY1P32364 656 aaKnown RBP6.27□□□□□ -1.41
PXR1YGR280C CTI6Q08923 506 aa6.27□□□□□ -1.41
PXR1YGR280C GRX1P25373 110 aaKnown RBP6.26□□□□□ -1.41
PXR1YGR280C PFF1P38244 976 aa6.26□□□□□ -1.41
PXR1YGR280C RIM15P43565 1770 aa6.26□□□□□ -1.41
PXR1YGR280C FBP1P09201 348 aa6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms