RNA–Protein interactions for RNA: YGR198W

YPP1, Transcript of Cargo-transport protein involved in endocytosis, yeast

Gene YPP1, Length 2,454 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPP1	YGR198W	MSB4	Q12317	492 aa		4.18	□□□□□ -1.74
YPP1	YGR198W	TIF6	Q12522	245 aa	Known RBP	4.18	□□□□□ -1.74
YPP1	YGR198W	TGL3	P40308	642 aa		4.17	□□□□□ -1.74
YPP1	YGR198W	OXP1	P28273	1286 aa		4.17	□□□□□ -1.74
YPP1	YGR198W	NCS6	P53088	359 aa		4.17	□□□□□ -1.74
YPP1	YGR198W	RET1	P22276	1149 aa	Known RBP	4.16	□□□□□ -1.74
YPP1	YGR198W	RTG2	P32608	588 aa	Known RBP	4.16	□□□□□ -1.74
YPP1	YGR198W	SLX5	P32828	619 aa	Known RBP	4.16	□□□□□ -1.74
YPP1	YGR198W	RAD4	P14736	754 aa		4.15	□□□□□ -1.74
YPP1	YGR198W	SLI15	P38283	698 aa		4.15	□□□□□ -1.74
YPP1	YGR198W	RRT14	P40470	206 aa		4.15	□□□□□ -1.74
YPP1	YGR198W	TYW1	Q08960	810 aa	Known RBP	4.15	□□□□□ -1.74
YPP1	YGR198W	FIG2	P25653	1609 aa		4.14	□□□□□ -1.75
YPP1	YGR198W	THS1	P04801	734 aa	Known RBP	4.13	□□□□□ -1.75
YPP1	YGR198W	NAP1	P25293	417 aa	Known RBP	4.13	□□□□□ -1.75
YPP1	YGR198W	ENP1	P38333	483 aa	Known RBP	4.13	□□□□□ -1.75
YPP1	YGR198W	TIF4632	P39936	914 aa	Known RBP	4.13	□□□□□ -1.75
YPP1	YGR198W	VHR2	P40041	505 aa		4.13	□□□□□ -1.75
YPP1	YGR198W	YIL089W	P40500	205 aa		4.13	□□□□□ -1.75
YPP1	YGR198W	CWH41	P53008	833 aa		4.13	□□□□□ -1.75
YPP1	YGR198W	YIL177C	P40434	1758 aa		4.12	□□□□□ -1.75
YPP1	YGR198W	YJL225C	P40889	1758 aa		4.12	□□□□□ -1.75
YPP1	YGR198W	CHZ1	P40019	153 aa	Predicted RBP	4.12	□□□□□ -1.75
YPP1	YGR198W	ATG20	Q07528	640 aa		4.12	□□□□□ -1.75
YPP1	YGR198W	HPC2	Q01448	625 aa		4.12	□□□□□ -1.75
YPP1	YGR198W	XKS1	P42826	600 aa		4.11	□□□□□ -1.75
YPP1	YGR198W	PRP43	P53131	767 aa	Known RBP	4.11	□□□□□ -1.75
YPP1	YGR198W	GRE2	Q12068	342 aa	Known RBP	4.11	□□□□□ -1.75
YPP1	YGR198W	RTC1	Q08281	1341 aa		4.1	□□□□□ -1.75
YPP1	YGR198W	MEC3	Q02574	474 aa		4.1	□□□□□ -1.75
YPP1	YGR198W	SHC1	P39000	512 aa		4.1	□□□□□ -1.75
YPP1	YGR198W	RCM1	P53972	490 aa		4.1	□□□□□ -1.75
YPP1	YGR198W	TUM1	Q08686	304 aa	Known RBP	4.1	□□□□□ -1.75
YPP1	YGR198W	SIR4	P11978	1358 aa		4.09	□□□□□ -1.75
YPP1	YGR198W	PAM1	P37304	830 aa	Known RBP	4.09	□□□□□ -1.76
YPP1	YGR198W	PPH3	P32345	308 aa		4.08	□□□□□ -1.76
YPP1	YGR198W	BSD2	P38356	321 aa		4.08	□□□□□ -1.76
YPP1	YGR198W	DLD1	P32891	587 aa		4.07	□□□□□ -1.76
YPP1	YGR198W	PFF1	P38244	976 aa		4.07	□□□□□ -1.76
YPP1	YGR198W	EAR1	Q03212	550 aa		4.07	□□□□□ -1.76
YPP1	YGR198W	MST1	P07236	462 aa		4.07	□□□□□ -1.76
YPP1	YGR198W	HVG1	P0CE11	249 aa		4.07	□□□□□ -1.76
YPP1	YGR198W	GLC3	P32775	704 aa		4.06	□□□□□ -1.76
YPP1	YGR198W	FRK1	Q03002	865 aa	Predicted RBP	4.06	□□□□□ -1.76
YPP1	YGR198W	RIX7	Q07844	837 aa	Known RBP	4.06	□□□□□ -1.76
YPP1	YGR198W	FAS2	P19097	1887 aa	Known RBP	4.06	□□□□□ -1.76
YPP1	YGR198W	YPR117W	Q06116	2489 aa		4.06	□□□□□ -1.76
YPP1	YGR198W	SIS1	P25294	352 aa	Known RBP	4.06	□□□□□ -1.76
YPP1	YGR198W	EPS1	P40557	701 aa		4.06	□□□□□ -1.76
YPP1	YGR198W	GRX1	P25373	110 aa	Known RBP	4.05	□□□□□ -1.76
YPP1	YGR198W	CLA4	P48562	842 aa		4.05	□□□□□ -1.76
YPP1	YGR198W	CST9	Q06032	482 aa		4.05	□□□□□ -1.76
YPP1	YGR198W	YMR084W	A2P2R3	262 aa		4.05	□□□□□ -1.76
YPP1	YGR198W	UBP9	P39967	754 aa		4.05	□□□□□ -1.76
YPP1	YGR198W	RPO41	P13433	1351 aa	Known RBP	4.05	□□□□□ -1.76
YPP1	YGR198W	MOT2	P34909	587 aa	Known RBP	4.04	□□□□□ -1.76
YPP1	YGR198W	PEA2	P40091	420 aa		4.04	□□□□□ -1.76
YPP1	YGR198W	NST1	P53935	1240 aa		4.03	□□□□□ -1.76
YPP1	YGR198W	ERO1	Q03103	563 aa		4.03	□□□□□ -1.76
YPP1	YGR198W	TOP1	P04786	769 aa		4.03	□□□□□ -1.76
YPP1	YGR198W	ADE16	P54113	591 aa	Known RBP	4.03	□□□□□ -1.76
YPP1	YGR198W	FBP1	P09201	348 aa		4.02	□□□□□ -1.77
YPP1	YGR198W	PAF1	P38351	445 aa		4.02	□□□□□ -1.77
YPP1	YGR198W	RSC30	P38781	883 aa		4.02	□□□□□ -1.77
YPP1	YGR198W	YLL067C	Q07888	1374 aa		4.02	□□□□□ -1.77
YPP1	YGR198W	GAP1	P19145	602 aa	Predicted RBP	4.02	□□□□□ -1.77
YPP1	YGR198W	SMY1	P32364	656 aa	Known RBP	4.02	□□□□□ -1.77
YPP1	YGR198W	TIM50	Q02776	476 aa		4.01	□□□□□ -1.77
YPP1	YGR198W	CWC15	Q03772	175 aa	Known RBP	4.01	□□□□□ -1.77
YPP1	YGR198W	MTR4	P47047	1073 aa	Known RBP	4	□□□□□ -1.77
YPP1	YGR198W	TAF8	Q03750	510 aa		4	□□□□□ -1.77
YPP1	YGR198W	GSC2	P40989	1895 aa		4	□□□□□ -1.77
YPP1	YGR198W	UTP10	P42945	1769 aa	Known RBP	4	□□□□□ -1.77
YPP1	YGR198W	ICL1	P28240	557 aa	Predicted RBP	4	□□□□□ -1.77
YPP1	YGR198W	FET4	P40988	552 aa		4	□□□□□ -1.77
YPP1	YGR198W	ATG13	Q06628	738 aa		4	□□□□□ -1.77
YPP1	YGR198W	GRX6	Q12438	231 aa		4	□□□□□ -1.77
YPP1	YGR198W	NUM1	Q00402	2748 aa		3.99	□□□□□ -1.77
YPP1	YGR198W	YKU70	P32807	602 aa		3.99	□□□□□ -1.77
YPP1	YGR198W	CSE4	P36012	229 aa		3.99	□□□□□ -1.77
YPP1	YGR198W	APE3	P37302	537 aa	Known RBP	3.99	□□□□□ -1.77
YPP1	YGR198W	CSR2	Q12734	1121 aa		3.99	□□□□□ -1.77
YPP1	YGR198W	RCR1	P38212	213 aa		3.98	□□□□□ -1.77
YPP1	YGR198W	EMP47	P43555	445 aa		3.98	□□□□□ -1.77
YPP1	YGR198W	MSM1	P22438	575 aa		3.98	□□□□□ -1.77
YPP1	YGR198W	PSD2	P53037	1138 aa	Known RBP	3.98	□□□□□ -1.77
YPP1	YGR198W	RRT6	P53117	311 aa	Predicted RBP	3.97	□□□□□ -1.77
YPP1	YGR198W	YBL029C-A	Q3E756	94 aa		3.97	□□□□□ -1.77
YPP1	YGR198W	LEU2	P04173	364 aa	Predicted RBP	3.96	□□□□□ -1.78
YPP1	YGR198W	RPS24A	P0CX31	135 aa	Known RBP	3.96	□□□□□ -1.78
YPP1	YGR198W	RPS24B	P0CX32	135 aa	Known RBP	3.96	□□□□□ -1.78
YPP1	YGR198W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
YPP1	YGR198W	WHI3	P34761	661 aa	Known RBP	3.96	□□□□□ -1.78
YPP1	YGR198W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	RIP-Chip
YPP1	YGR198W	LYS2	P07702	1392 aa		3.96	□□□□□ -1.78
YPP1	YGR198W	TOR1	P35169	2470 aa		3.96	□□□□□ -1.78
YPP1	YGR198W	TOM1	Q03280	3268 aa		3.96	□□□□□ -1.78
YPP1	YGR198W	HKR1	P41809	1802 aa		3.95	□□□□□ -1.78
YPP1	YGR198W	SIT4	P20604	311 aa		3.95	□□□□□ -1.78
YPP1	YGR198W	AIM7	Q12156	149 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms