RNA–Protein interactions for RNA: YGR129W

SYF2, Transcript of Member of the NineTeen Complex (NTC), yeastyeast

Gene SYF2, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SYF2YGR129W UBP1P25037 809 aa8.67□□□□□ -1.02
SYF2YGR129W RRP5Q05022 1729 aaKnown RBP8.67□□□□□ -1.02
SYF2YGR129W YBL086CP38177 466 aa8.66□□□□□ -1.02
SYF2YGR129W ILV3P39522 585 aaKnown RBP8.65□□□□□ -1.02
SYF2YGR129W PEX29Q03370 554 aa8.65□□□□□ -1.02
SYF2YGR129W CAB1Q04430 367 aa8.65□□□□□ -1.02
SYF2YGR129W YGR273CP53329 174 aa8.64□□□□□ -1.03
SYF2YGR129W NUP192P47054 1683 aa8.64□□□□□ -1.03
SYF2YGR129W PRP45P28004 379 aaPredicted RBP8.63□□□□□ -1.03
SYF2YGR129W LEU3P08638 886 aa8.62□□□□□ -1.03
SYF2YGR129W UGA2P38067 497 aa8.62□□□□□ -1.03
SYF2YGR129W RPN11P43588 306 aaKnown RBP8.61□□□□□ -1.03
SYF2YGR129W ARH1P48360 493 aa8.61□□□□□ -1.03
SYF2YGR129W RAD9P14737 1309 aa8.6□□□□□ -1.03
SYF2YGR129W ALD4P46367 519 aaKnown RBP8.6□□□□□ -1.03
SYF2YGR129W RRD1P40454 393 aaKnown RBP8.59□□□□□ -1.03
SYF2YGR129W SET1P38827 1080 aaKnown RBP8.58□□□□□ -1.04
SYF2YGR129W VRP1P37370 817 aa8.57□□□□□ -1.04
SYF2YGR129W TAF5P38129 798 aa8.56□□□□□ -1.04
SYF2YGR129W DOT5P40553 215 aa8.56□□□□□ -1.04
SYF2YGR129W LYS4P49367 693 aaPredicted RBP8.56□□□□□ -1.04
SYF2YGR129W ALD2P47771 506 aa8.54□□□□□ -1.04
SYF2YGR129W URB1P34241 1764 aaKnown RBP8.53□□□□□ -1.04
SYF2YGR129W SSA2P10592 639 aaKnown RBP8.53□□□□□ -1.04
SYF2YGR129W PRP5P21372 849 aaPredicted RBP8.53□□□□□ -1.04
SYF2YGR129W NPR2P39923 615 aa8.53□□□□□ -1.04
SYF2YGR129W HAP5Q02516 242 aa8.53□□□□□ -1.04
SYF2YGR129W RAV1P47104 1357 aa8.52□□□□□ -1.05
SYF2YGR129W SPT23P35210 1082 aa8.52□□□□□ -1.05
SYF2YGR129W MPC54Q08550 464 aa8.52□□□□□ -1.05
SYF2YGR129W SLI15P38283 698 aa8.51□□□□□ -1.05
SYF2YGR129W EDE1P34216 1381 aa8.5□□□□□ -1.05
SYF2YGR129W CPS1P27614 576 aa8.5□□□□□ -1.05
SYF2YGR129W XDJ1P39102 459 aa8.5□□□□□ -1.05
SYF2YGR129W IES2P40154 320 aa8.49□□□□□ -1.05
SYF2YGR129W YJL181WP46987 611 aa8.49□□□□□ -1.05
SYF2YGR129W PSK1P31374 1356 aa8.48□□□□□ -1.05
SYF2YGR129W KEX1P09620 729 aa8.48□□□□□ -1.05
SYF2YGR129W FOX2Q02207 900 aaKnown RBP8.48□□□□□ -1.05
SYF2YGR129W IKI3Q06706 1349 aaKnown RBP8.48□□□□□ -1.05
SYF2YGR129W CTH1P47976 325 aa8.47□□□□□ -1.05
SYF2YGR129W TY4B-HP0C2J7 1802 aa8.47□□□□□ -1.05
SYF2YGR129W TY4B-JP47024 1803 aa8.47□□□□□ -1.05
SYF2YGR129W PAF1P38351 445 aa8.46□□□□□ -1.06
SYF2YGR129W MSB3P48566 633 aaPredicted RBP8.46□□□□□ -1.06
SYF2YGR129W BNI4P53858 892 aa8.46□□□□□ -1.06
SYF2YGR129W SSM4P40318 1319 aa8.46□□□□□ -1.06
SYF2YGR129W RTC1Q08281 1341 aa8.46□□□□□ -1.06
SYF2YGR129W DPL1Q05567 589 aa8.45□□□□□ -1.06
SYF2YGR129W ROM2P51862 1356 aaKnown RBP8.45□□□□□ -1.06
SYF2YGR129W FKS3Q04952 1785 aa8.44□□□□□ -1.06
SYF2YGR129W NMA111P53920 997 aa8.44□□□□□ -1.06
SYF2YGR129W YEF3P16521 1044 aaKnown RBP8.43□□□□□ -1.06
SYF2YGR129W PTC2P39966 464 aaKnown RBP8.43□□□□□ -1.06
SYF2YGR129W VHR2P40041 505 aa8.43□□□□□ -1.06
SYF2YGR129W RCM1P53972 490 aa8.43□□□□□ -1.06
SYF2YGR129W NAP1P25293 417 aaKnown RBP8.42□□□□□ -1.06
SYF2YGR129W YLR326WQ06170 240 aaKnown RBP8.42□□□□□ -1.06
SYF2YGR129W PRP40P33203 583 aaKnown RBP8.41□□□□□ -1.06
SYF2YGR129W LAM6Q08001 693 aa8.41□□□□□ -1.06
SYF2YGR129W YRF1-3P0CX14 1859 aa8.4□□□□□ -1.06
SYF2YGR129W YRF1-7P0CX15 1859 aa8.4□□□□□ -1.06
SYF2YGR129W YRF1-6P53819 1859 aa8.4□□□□□ -1.06
SYF2YGR129W TCB1Q12466 1186 aa8.4□□□□□ -1.06
SYF2YGR129W PPH3P32345 308 aa8.39□□□□□ -1.07
SYF2YGR129W UBP14P38237 781 aaKnown RBP8.39□□□□□ -1.07
SYF2YGR129W RSF2P46974 1380 aa8.38□□□□□ -1.07
SYF2YGR129W YML082WQ04533 649 aaKnown RBP8.38□□□□□ -1.07
SYF2YGR129W TAF8Q03750 510 aa8.37□□□□□ -1.07
SYF2YGR129W DPS1P04802 557 aaKnown RBP8.36□□□□□ -1.07
SYF2YGR129W CDC73Q06697 393 aa8.36□□□□□ -1.07
SYF2YGR129W ADE6P38972 1358 aaKnown RBP8.35□□□□□ -1.07
SYF2YGR129W COBP00163 385 aa8.35□□□□□ -1.07
SYF2YGR129W RAD54P32863 898 aa8.35□□□□□ -1.07
SYF2YGR129W YKL133CP36066 463 aa8.34□□□□□ -1.07
SYF2YGR129W YKR075CP36155 307 aa8.34□□□□□ -1.07
SYF2YGR129W PCS60P38137 543 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
SYF2YGR129W SLM3Q12093 417 aa8.34□□□□□ -1.07
SYF2YGR129W ISU2Q12056 156 aa8.33□□□□□ -1.08
SYF2YGR129W ENP1P38333 483 aaKnown RBP8.3□□□□□ -1.08
SYF2YGR129W ALD3P54114 506 aa8.29□□□□□ -1.08
SYF2YGR129W SPT7P35177 1332 aa8.29□□□□□ -1.08
SYF2YGR129W ESL2P36168 1195 aa8.28□□□□□ -1.08
SYF2YGR129W EAF6P47128 113 aa8.28□□□□□ -1.08
SYF2YGR129W YPR148CQ06523 435 aa8.28□□□□□ -1.08
SYF2YGR129W YPR015CQ12531 247 aa8.28□□□□□ -1.08
SYF2YGR129W YRF1-4O13559 1382 aa8.27□□□□□ -1.09
SYF2YGR129W RPP1BP10622 106 aaKnown RBP8.27□□□□□ -1.09
SYF2YGR129W KIC1P38692 1080 aa8.27□□□□□ -1.09
SYF2YGR129W RAM1P22007 431 aa8.26□□□□□ -1.09
SYF2YGR129W YDR090CQ03193 310 aa8.26□□□□□ -1.09
SYF2YGR129W XKS1P42826 600 aa8.25□□□□□ -1.09
SYF2YGR129W NOP7P53261 605 aaKnown RBP8.25□□□□□ -1.09
SYF2YGR129W SNF2P22082 1703 aa8.25□□□□□ -1.09
SYF2YGR129W SSA4P22202 642 aaKnown RBP8.24□□□□□ -1.09
SYF2YGR129W PRP43P53131 767 aaKnown RBP8.24□□□□□ -1.09
SYF2YGR129W PDR1P12383 1068 aa8.23□□□□□ -1.09
SYF2YGR129W CSE4P36012 229 aa8.23□□□□□ -1.09
SYF2YGR129W REF2P42073 533 aaPredicted RBP8.23□□□□□ -1.09
SYF2YGR129W RPS24AP0CX31 135 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms