RNA–Protein interactions for RNA: YDR011W

SNQ2, Transcript of Plasma membrane ATP-binding cassette (ABC) transporter, yeastyeast

Gene SNQ2, Length 4,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNQ2YDR011W TY4B-JP47024 1803 aa3.41□□□□□ -1.86
SNQ2YDR011W ARD1P07347 238 aaPredicted RBP3.41□□□□□ -1.86
SNQ2YDR011W KAR2P16474 682 aaKnown RBP3.41□□□□□ -1.86
SNQ2YDR011W DEP1P31385 405 aa3.41□□□□□ -1.86
SNQ2YDR011W NFU1P32860 256 aa3.41□□□□□ -1.86
SNQ2YDR011W MET10P39692 1035 aa3.41□□□□□ -1.86
SNQ2YDR011W RRP17Q04031 235 aaPredicted RBP3.41□□□□□ -1.86
SNQ2YDR011W VHS3Q08438 674 aa3.41□□□□□ -1.86
SNQ2YDR011W BUG1Q12191 341 aa3.41□□□□□ -1.86
SNQ2YDR011W AVT3P36062 692 aa3.4□□□□□ -1.86
SNQ2YDR011W OLA1P38219 394 aaKnown RBP3.4□□□□□ -1.86
SNQ2YDR011W RUD3Q12234 484 aaKnown RBP3.4□□□□□ -1.86
SNQ2YDR011W YKL023WP36103 277 aaKnown RBP3.4□□□□□ -1.86
SNQ2YDR011W TSR2Q06672 205 aaKnown RBP3.4□□□□□ -1.86
SNQ2YDR011W VPS13Q07878 3144 aa3.4□□□□□ -1.87
SNQ2YDR011W LTE1P07866 1435 aa3.4□□□□□ -1.87
SNQ2YDR011W TTI1P36097 1038 aa3.4□□□□□ -1.87
SNQ2YDR011W RSM25P40496 264 aa3.4□□□□□ -1.87
SNQ2YDR011W EIS1Q05050 843 aaKnown RBP3.4□□□□□ -1.87
SNQ2YDR011W RRP14P36080 434 aaKnown RBP3.39□□□□□ -1.87
SNQ2YDR011W RPC37P36121 282 aa3.39□□□□□ -1.87
SNQ2YDR011W RRP8P38961 392 aaKnown RBP3.39□□□□□ -1.87
SNQ2YDR011W CAJ1P39101 391 aa3.39□□□□□ -1.87
SNQ2YDR011W YJL181WP46987 611 aa3.39□□□□□ -1.87
SNQ2YDR011W OPY2Q06810 360 aa3.39□□□□□ -1.87
SNQ2YDR011W PLP2Q12017 286 aa3.39□□□□□ -1.87
SNQ2YDR011W KEL1P38853 1164 aaKnown RBP3.39□□□□□ -1.87
SNQ2YDR011W VPS27P40343 622 aaKnown RBP3.39□□□□□ -1.87
SNQ2YDR011W DUR1,2P32528 1835 aaKnown RBP3.39□□□□□ -1.87
SNQ2YDR011W SWC3P31376 625 aa3.39□□□□□ -1.87
SNQ2YDR011W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
SNQ2YDR011W MSH4P40965 878 aaPredicted RBP3.39□□□□□ -1.87
SNQ2YDR011W BBC1P47068 1157 aa3.39□□□□□ -1.87
SNQ2YDR011W SNU66Q12420 587 aaPredicted RBP3.39□□□□□ -1.87
SNQ2YDR011W SPO19Q03029 223 aa3.38□□□□□ -1.87
SNQ2YDR011W RRT14P40470 206 aa3.38□□□□□ -1.87
SNQ2YDR011W DOS2P54858 310 aa3.38□□□□□ -1.87
SNQ2YDR011W BDP1P46678 594 aa3.38□□□□□ -1.87
SNQ2YDR011W NOC3Q07896 663 aaPredicted RBP3.38□□□□□ -1.87
SNQ2YDR011W YRF1-2P40105 1681 aa3.38□□□□□ -1.87
SNQ2YDR011W RPC31P17890 251 aa3.38□□□□□ -1.87
SNQ2YDR011W YEL1P34225 687 aa3.38□□□□□ -1.87
SNQ2YDR011W NMD3P38861 518 aaKnown RBP3.38□□□□□ -1.87
SNQ2YDR011W TCB2P48231 1178 aa3.38□□□□□ -1.87
SNQ2YDR011W TRA1P38811 3744 aa3.37□□□□□ -1.87
SNQ2YDR011W MMS1Q06211 1407 aa3.37□□□□□ -1.87
SNQ2YDR011W RTT105P40063 208 aa3.37□□□□□ -1.87
SNQ2YDR011W RLP7P40693 322 aaKnown RBP3.37□□□□□ -1.87
SNQ2YDR011W BUD6P41697 788 aa3.37□□□□□ -1.87
SNQ2YDR011W TRM3Q07527 1436 aa3.37□□□□□ -1.87
SNQ2YDR011W RPP2BP02400 110 aaKnown RBP3.37□□□□□ -1.87
SNQ2YDR011W EFB1P32471 206 aaKnown RBP3.37□□□□□ -1.87
SNQ2YDR011W MRE11P32829 692 aa3.37□□□□□ -1.87
SNQ2YDR011W VPS30Q02948 557 aa3.37□□□□□ -1.87
SNQ2YDR011W ATG11Q12527 1178 aa3.37□□□□□ -1.87
SNQ2YDR011W PRP4P20053 465 aaKnown RBP3.36□□□□□ -1.87
SNQ2YDR011W SLD2P34252 453 aa3.36□□□□□ -1.87
SNQ2YDR011W VPS21P36017 210 aaKnown RBP3.36□□□□□ -1.87
SNQ2YDR011W RPS0BP46654 252 aaKnown RBP3.36□□□□□ -1.87
SNQ2YDR011W TY4A-JP47023 414 aa3.36□□□□□ -1.87
SNQ2YDR011W YGR130CP53278 816 aa3.36□□□□□ -1.87
SNQ2YDR011W IES3Q12345 250 aa3.36□□□□□ -1.87
SNQ2YDR011W MRPL25P23369 157 aa3.36□□□□□ -1.87
SNQ2YDR011W TAF5P38129 798 aa3.36□□□□□ -1.87
SNQ2YDR011W FAR11P53917 953 aa3.36□□□□□ -1.87
SNQ2YDR011W SLK19Q08581 821 aaKnown RBP3.36□□□□□ -1.87
SNQ2YDR011W DIP2Q12220 943 aaPredicted RBP3.36□□□□□ -1.87
SNQ2YDR011W SMC2P38989 1170 aaKnown RBP3.36□□□□□ -1.87
SNQ2YDR011W CIK1Q01649 594 aa3.36□□□□□ -1.87
SNQ2YDR011W SBP1P10080 294 aaKnown RBP3.36□□□□□ -1.87
SNQ2YDR011W BRL1P38770 471 aa3.36□□□□□ -1.87
SNQ2YDR011W FYV8P46949 817 aaKnown RBP3.36□□□□□ -1.87
SNQ2YDR011W LSG1P53145 640 aaKnown RBP3.36□□□□□ -1.87
SNQ2YDR011W KRE33P53914 1056 aaKnown RBP3.36□□□□□ -1.87
SNQ2YDR011W TFB3Q03290 321 aa3.36□□□□□ -1.87
SNQ2YDR011W ZUO1P32527 433 aaKnown RBP3.35□□□□□ -1.87
SNQ2YDR011W SAP190P36123 1033 aa3.35□□□□□ -1.87
SNQ2YDR011W ISW1P38144 1129 aa3.35□□□□□ -1.87
SNQ2YDR011W SDA1P53313 767 aaKnown RBP3.35□□□□□ -1.87
SNQ2YDR011W NSE3Q05541 303 aa3.35□□□□□ -1.87
SNQ2YDR011W TOA1P32773 286 aa3.35□□□□□ -1.87
SNQ2YDR011W RPS0AP32905 252 aaKnown RBP3.35□□□□□ -1.87
SNQ2YDR011W UBC6P33296 250 aaPredicted RBP3.35□□□□□ -1.87
SNQ2YDR011W SAS3P34218 831 aa3.35□□□□□ -1.87
SNQ2YDR011W ACF4P47129 309 aa3.35□□□□□ -1.87
SNQ2YDR011W SPT2P06843 333 aaPredicted RBP3.35□□□□□ -1.87
SNQ2YDR011W PWP2P25635 923 aaKnown RBP3.35□□□□□ -1.87
SNQ2YDR011W PDS5Q04264 1277 aa3.35□□□□□ -1.87
SNQ2YDR011W HCR1Q05775 265 aaKnown RBP3.35□□□□□ -1.87
SNQ2YDR011W TOP1P04786 769 aa3.34□□□□□ -1.87
SNQ2YDR011W PDI1P17967 522 aaKnown RBP3.34□□□□□ -1.87
SNQ2YDR011W UBP1P25037 809 aa3.34□□□□□ -1.87
SNQ2YDR011W PEX5P35056 612 aa3.34□□□□□ -1.87
SNQ2YDR011W RPG1P38249 964 aaKnown RBP3.34□□□□□ -1.87
SNQ2YDR011W DSN1P40568 576 aa3.34□□□□□ -1.87
SNQ2YDR011W MDG1P53885 366 aa3.34□□□□□ -1.87
SNQ2YDR011W BRE1Q07457 700 aaKnown RBP3.34□□□□□ -1.87
SNQ2YDR011W IOC2Q12072 812 aa3.34□□□□□ -1.87
SNQ2YDR011W PDR18P53756 1333 aa3.34□□□□□ -1.87
SNQ2YDR011W HGH1P48362 394 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms