RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W YPR204WQ08995 1032 aa7.06□□□□□ -1.28
KIN28YDL108W KXD1P53158 218 aa7.05□□□□□ -1.28
KIN28YDL108W YDJ1P25491 409 aaKnown RBP7.04□□□□□ -1.28
KIN28YDL108W HED1Q03937 162 aa7.04□□□□□ -1.28
KIN28YDL108W SUP45P12385 437 aaKnown RBP7.03□□□□□ -1.28
KIN28YDL108W NAF1P53919 492 aaKnown RBP7.03□□□□□ -1.28
KIN28YDL108W YPR097WQ06839 1073 aa7.03□□□□□ -1.28
KIN28YDL108W PDC1P06169 563 aaKnown RBP7.02□□□□□ -1.29
KIN28YDL108W ENO2P00925 437 aaKnown RBP7.01□□□□□ -1.29
KIN28YDL108W YPP1P46951 817 aa7.01□□□□□ -1.29
KIN28YDL108W YDR444WQ04093 687 aa7.01□□□□□ -1.29
KIN28YDL108W HXT10P43581 546 aa6.99□□□□□ -1.29
KIN28YDL108W MET32Q12041 191 aa6.99□□□□□ -1.29
KIN28YDL108W MCM16Q12262 181 aa6.99□□□□□ -1.29
KIN28YDL108W TEC1P18412 486 aa6.98□□□□□ -1.29
KIN28YDL108W SSA4P22202 642 aaKnown RBP6.98□□□□□ -1.29
KIN28YDL108W RIM21P48565 533 aa6.98□□□□□ -1.29
KIN28YDL108W ENO1P00924 437 aaKnown RBP6.97□□□□□ -1.29
KIN28YDL108W ASH1P34233 588 aa6.97□□□□□ -1.29
KIN28YDL108W RRD1P40454 393 aaKnown RBP6.97□□□□□ -1.29
KIN28YDL108W CPS1P27614 576 aa6.96□□□□□ -1.3
KIN28YDL108W YDL176WQ12027 708 aa6.96□□□□□ -1.3
KIN28YDL108W MOD5P07884 428 aa6.95□□□□□ -1.3
KIN28YDL108W SIS2P36024 562 aa6.95□□□□□ -1.3
KIN28YDL108W FIG4P42837 879 aa6.95□□□□□ -1.3
KIN28YDL108W TPD3P31383 635 aa6.94□□□□□ -1.3
KIN28YDL108W GUT2P32191 649 aa6.94□□□□□ -1.3
KIN28YDL108W ISF1P32488 338 aa6.94□□□□□ -1.3
KIN28YDL108W TTI1P36097 1038 aa6.94□□□□□ -1.3
KIN28YDL108W EMP47P43555 445 aa6.94□□□□□ -1.3
KIN28YDL108W STE20Q03497 939 aaKnown RBP6.94□□□□□ -1.3
KIN28YDL108W LCB5Q06147 687 aaKnown RBP6.94□□□□□ -1.3
KIN28YDL108W URN1Q06525 465 aaKnown RBP6.94□□□□□ -1.3
KIN28YDL108W MRX10Q05648 414 aa6.93□□□□□ -1.3
KIN28YDL108W SUB2Q07478 446 aaKnown RBP6.93□□□□□ -1.3
KIN28YDL108W PUS5Q06244 254 aa6.92□□□□□ -1.3
KIN28YDL108W AFT1P22149 690 aa6.91□□□□□ -1.3
KIN28YDL108W FRA1Q07825 749 aa6.91□□□□□ -1.3
KIN28YDL108W SSA1P10591 642 aaKnown RBP6.9□□□□□ -1.3
KIN28YDL108W VAC17P25591 423 aa6.9□□□□□ -1.3
KIN28YDL108W KIP2P28743 706 aa6.9□□□□□ -1.3
KIN28YDL108W ATG3P40344 310 aa6.9□□□□□ -1.3
KIN28YDL108W MRX12P47084 519 aa6.9□□□□□ -1.3
KIN28YDL108W HST3P53687 447 aa6.89□□□□□ -1.31
KIN28YDL108W YPR084WQ06821 456 aa6.89□□□□□ -1.31
KIN28YDL108W RDS2P19541 446 aaKnown RBP6.87□□□□□ -1.31
KIN28YDL108W IXR1P33417 597 aa6.87□□□□□ -1.31
KIN28YDL108W KTR7P40504 517 aa6.86□□□□□ -1.31
KIN28YDL108W YJR115WP47152 169 aa6.86□□□□□ -1.31
KIN28YDL108W SYH1Q02875 849 aaKnown RBP6.85□□□□□ -1.31
KIN28YDL108W PEP12P32854 288 aa6.84□□□□□ -1.31
KIN28YDL108W TGL4P36165 910 aa6.84□□□□□ -1.31
KIN28YDL108W GEF1P37020 779 aa6.84□□□□□ -1.31
KIN28YDL108W AIM44Q99299 758 aa6.84□□□□□ -1.31
KIN28YDL108W SOH1P38633 127 aa6.83□□□□□ -1.32
KIN28YDL108W RPL34AP87262 121 aaPredicted RBP6.83□□□□□ -1.32
KIN28YDL108W ITT1Q04638 464 aa6.83□□□□□ -1.32
KIN28YDL108W PUP1P25043 261 aa6.82□□□□□ -1.32
KIN28YDL108W UTP13Q05946 817 aaKnown RBP6.82□□□□□ -1.32
KIN28YDL108W NOB1Q08444 459 aaKnown RBP6.82□□□□□ -1.32
KIN28YDL108W APL6P46682 809 aa6.81□□□□□ -1.32
KIN28YDL108W ECM23Q02710 187 aa6.8□□□□□ -1.32
KIN28YDL108W ATG20Q07528 640 aa6.8□□□□□ -1.32
KIN28YDL108W APP1P53933 587 aa6.79□□□□□ -1.32
KIN28YDL108W YML083CQ04526 418 aa6.79□□□□□ -1.32
KIN28YDL108W ISR1Q06098 443 aaKnown RBP6.79□□□□□ -1.32
KIN28YDL108W GAL2P13181 574 aa6.77□□□□□ -1.33
KIN28YDL108W EMW1P42842 904 aaKnown RBP6.76□□□□□ -1.33
KIN28YDL108W CAF120P53836 1060 aa6.76□□□□□ -1.33
KIN28YDL108W MIP1P15801 1254 aa6.75□□□□□ -1.33
KIN28YDL108W NAP1P25293 417 aaKnown RBP6.75□□□□□ -1.33
KIN28YDL108W PHO87P25360 923 aa6.75□□□□□ -1.33
KIN28YDL108W UBX7P38349 436 aa6.75□□□□□ -1.33
KIN28YDL108W HAP4P14064 554 aa6.74□□□□□ -1.33
KIN28YDL108W MKS1P34072 584 aa6.74□□□□□ -1.33
KIN28YDL108W HAL5P38970 855 aaKnown RBP6.74□□□□□ -1.33
KIN28YDL108W MSB3P48566 633 aaPredicted RBP6.74□□□□□ -1.33
KIN28YDL108W YFL034WP43564 1073 aa6.73□□□□□ -1.33
KIN28YDL108W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33 RIP-Chip
KIN28YDL108W TSC13Q99190 310 aa6.73□□□□□ -1.33
KIN28YDL108W FBP26P32604 452 aa6.72□□□□□ -1.33
KIN28YDL108W ACO2P39533 789 aa6.72□□□□□ -1.33
KIN28YDL108W PDI1P17967 522 aaKnown RBP6.71□□□□□ -1.34
KIN28YDL108W MRT4P33201 236 aaKnown RBP6.71□□□□□ -1.34
KIN28YDL108W AIM9P40053 627 aaKnown RBP6.71□□□□□ -1.34
KIN28YDL108W ACS2P52910 683 aaKnown RBP6.71□□□□□ -1.34
KIN28YDL108W HDA3Q06623 655 aa6.71□□□□□ -1.34
KIN28YDL108W CDC3P32457 520 aaKnown RBP6.7□□□□□ -1.34
KIN28YDL108W UTR2P32623 467 aa6.7□□□□□ -1.34
KIN28YDL108W ISU1Q03020 165 aa6.7□□□□□ -1.34
KIN28YDL108W OPT2Q06593 877 aa6.7□□□□□ -1.34
KIN28YDL108W GAS4Q08271 471 aa6.7□□□□□ -1.34
KIN28YDL108W RPP2BP02400 110 aaKnown RBP6.69□□□□□ -1.34
KIN28YDL108W YBL086CP38177 466 aa6.69□□□□□ -1.34
KIN28YDL108W IOC4Q04213 475 aa6.69□□□□□ -1.34
KIN28YDL108W SLX8P40072 274 aa6.68□□□□□ -1.34
KIN28YDL108W PTK2P47116 818 aaKnown RBP6.68□□□□□ -1.34
KIN28YDL108W DFG5Q05031 458 aa6.68□□□□□ -1.34
KIN28YDL108W DAT1P13483 248 aaKnown RBP6.67□□□□□ -1.34
KIN28YDL108W UGA3P26370 528 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms