RNA–Protein interactions for RNA: YCR004C

YCP4, Transcript of Protein of unknown function, yeastyeast

Gene YCP4, Length 744 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCP4YCR004C PDI1P17967 522 aaKnown RBP11.27□□□□□ -0.61
YCP4YCR004C TOS1P38288 455 aa11.27□□□□□ -0.61
YCP4YCR004C GRE2Q12068 342 aaKnown RBP11.27□□□□□ -0.61
YCP4YCR004C CTT1P06115 562 aa11.26□□□□□ -0.61
YCP4YCR004C MRPL32P25348 183 aa11.26□□□□□ -0.61
YCP4YCR004C YER156CP40093 338 aaKnown RBP11.26□□□□□ -0.61
YCP4YCR004C GRX1P25373 110 aaKnown RBP11.25□□□□□ -0.61
YCP4YCR004C RRT14P40470 206 aa11.24□□□□□ -0.61
YCP4YCR004C SQS1P53866 767 aaKnown RBP11.24□□□□□ -0.61
YCP4YCR004C MLP1Q02455 1875 aaKnown RBP11.21□□□□□ -0.62
YCP4YCR004C MHP1P43638 1398 aa11.2□□□□□ -0.62
YCP4YCR004C OSM1P21375 501 aaKnown RBP11.2□□□□□ -0.62
YCP4YCR004C YKL222CP35995 705 aa11.2□□□□□ -0.62
YCP4YCR004C SSA4P22202 642 aaKnown RBP11.19□□□□□ -0.62
YCP4YCR004C PEX21P50091 288 aa11.19□□□□□ -0.62
YCP4YCR004C SEC3P33332 1336 aaKnown RBP11.18□□□□□ -0.62
YCP4YCR004C GRX4P32642 244 aa11.17□□□□□ -0.62
YCP4YCR004C FKH1P40466 484 aa11.17□□□□□ -0.62
YCP4YCR004C CWH41P53008 833 aa11.17□□□□□ -0.62
YCP4YCR004C YBP2P53169 641 aa11.17□□□□□ -0.62
YCP4YCR004C RIX7Q07844 837 aaKnown RBP11.17□□□□□ -0.62
YCP4YCR004C INP54Q08227 384 aaKnown RBP11.16□□□□□ -0.62
YCP4YCR004C KIN4Q01919 800 aa11.15□□□□□ -0.62
YCP4YCR004C ERT1P38140 529 aa11.14□□□□□ -0.63
YCP4YCR004C TAP42Q04372 366 aa11.12□□□□□ -0.63
YCP4YCR004C PUS5Q06244 254 aa11.12□□□□□ -0.63
YCP4YCR004C RTG3P38165 486 aa11.11□□□□□ -0.63
YCP4YCR004C AUS1Q08409 1394 aa11.11□□□□□ -0.63
YCP4YCR004C HIM1Q06674 414 aa11.1□□□□□ -0.63
YCP4YCR004C FPK1P53739 893 aa11.09□□□□□ -0.63
YCP4YCR004C CTI6Q08923 506 aa11.09□□□□□ -0.63
YCP4YCR004C TUM1Q08686 304 aaKnown RBP11.08□□□□□ -0.64
YCP4YCR004C SLI15P38283 698 aa11.06□□□□□ -0.64
YCP4YCR004C TOP1P04786 769 aa11.05□□□□□ -0.64
YCP4YCR004C HSP104P31539 908 aaKnown RBP11.05□□□□□ -0.64
YCP4YCR004C BUB1P41695 1021 aaKnown RBP RIP-Chip data11.05□□□□□ -0.64not detected
YCP4YCR004C NST1P53935 1240 aa11.05□□□□□ -0.64
YCP4YCR004C NYV1Q12255 253 aa11.05□□□□□ -0.64
YCP4YCR004C NUP145P49687 1317 aa11.05□□□□□ -0.64
YCP4YCR004C BUD27P43573 796 aaKnown RBP RIP-Chip data11.04□□□□□ -0.64not detected
YCP4YCR004C PFF1P38244 976 aa11.03□□□□□ -0.64
YCP4YCR004C KAR2P16474 682 aaKnown RBP11.02□□□□□ -0.65
YCP4YCR004C TEA1P47988 759 aa11.02□□□□□ -0.65
YCP4YCR004C CTF4Q01454 927 aa11.02□□□□□ -0.65
YCP4YCR004C LPD1P09624 499 aaKnown RBP11.01□□□□□ -0.65
YCP4YCR004C YGL015CP33199 130 aa11.01□□□□□ -0.65
YCP4YCR004C DSD1P53095 428 aa11.01□□□□□ -0.65
YCP4YCR004C RMT2Q03305 412 aa11.01□□□□□ -0.65
YCP4YCR004C SMY1P32364 656 aaKnown RBP11□□□□□ -0.65
YCP4YCR004C THS1P04801 734 aaKnown RBP10.98□□□□□ -0.65
YCP4YCR004C RPS9BP05755 195 aaKnown RBP10.98□□□□□ -0.65
YCP4YCR004C MDG1P53885 366 aa10.98□□□□□ -0.65
YCP4YCR004C IRC3Q06683 689 aa10.98□□□□□ -0.65
YCP4YCR004C RET1P22276 1149 aaKnown RBP10.97□□□□□ -0.65
YCP4YCR004C SER1P33330 395 aaKnown RBP10.97□□□□□ -0.65
YCP4YCR004C ICL1P28240 557 aaPredicted RBP10.96□□□□□ -0.65
YCP4YCR004C PAP2P53632 584 aaKnown RBP10.96□□□□□ -0.65
YCP4YCR004C ATG20Q07528 640 aa10.96□□□□□ -0.65
YCP4YCR004C RAT1Q02792 1006 aaKnown RBP10.95□□□□□ -0.66
YCP4YCR004C NOP53Q12080 455 aaKnown RBP10.95□□□□□ -0.66
YCP4YCR004C YFR016CP43597 1233 aaKnown RBP10.94□□□□□ -0.66
YCP4YCR004C ERO1Q03103 563 aa10.94□□□□□ -0.66
YCP4YCR004C AOS1Q06624 347 aa10.94□□□□□ -0.66
YCP4YCR004C UTP10P42945 1769 aaKnown RBP10.94□□□□□ -0.66
YCP4YCR004C YKU70P32807 602 aa10.93□□□□□ -0.66
YCP4YCR004C SHC1P39000 512 aa10.93□□□□□ -0.66
YCP4YCR004C BDF2Q07442 638 aa10.93□□□□□ -0.66
YCP4YCR004C RTG2P32608 588 aaKnown RBP10.92□□□□□ -0.66
YCP4YCR004C AKL1P38080 1108 aaKnown RBP10.92□□□□□ -0.66
YCP4YCR004C DUS1P53759 423 aaKnown RBP10.92□□□□□ -0.66
YCP4YCR004C PHM7Q12252 991 aa10.92□□□□□ -0.66
YCP4YCR004C KCC4P25389 1037 aa10.91□□□□□ -0.66
YCP4YCR004C YGL082WP53155 381 aa10.91□□□□□ -0.66
YCP4YCR004C ALE1Q08548 619 aa10.91□□□□□ -0.66
YCP4YCR004C VHR2P40041 505 aa10.89□□□□□ -0.67
YCP4YCR004C PDS5Q04264 1277 aa10.89□□□□□ -0.67
YCP4YCR004C DIB1Q06819 143 aaPredicted RBP10.89□□□□□ -0.67
YCP4YCR004C GRX6Q12438 231 aa10.89□□□□□ -0.67
YCP4YCR004C YLR278CQ05854 1341 aa10.87□□□□□ -0.67
YCP4YCR004C CAF20P12962 161 aaKnown RBP10.87□□□□□ -0.67
YCP4YCR004C PMD1P32634 1753 aa10.87□□□□□ -0.67
YCP4YCR004C SIT4P20604 311 aa10.86□□□□□ -0.67
YCP4YCR004C SSP2Q08646 371 aa10.86□□□□□ -0.67
YCP4YCR004C FAS2P19097 1887 aaKnown RBP10.86□□□□□ -0.67
YCP4YCR004C ETP1P38748 585 aaKnown RBP10.85□□□□□ -0.67
YCP4YCR004C TOM1Q03280 3268 aa10.83□□□□□ -0.68
YCP4YCR004C MSM1P22438 575 aa10.83□□□□□ -0.68
YCP4YCR004C AIM7Q12156 149 aa10.83□□□□□ -0.68
YCP4YCR004C RPN1P38764 993 aaKnown RBP10.82□□□□□ -0.68
YCP4YCR004C RPL17AP05740 184 aaKnown RBP10.81□□□□□ -0.68
YCP4YCR004C NTH2P35172 780 aa10.81□□□□□ -0.68
YCP4YCR004C RPL17BP46990 184 aaKnown RBP10.81□□□□□ -0.68
YCP4YCR004C SAS4Q04003 481 aa10.81□□□□□ -0.68
YCP4YCR004C POM152P39685 1337 aa10.8□□□□□ -0.68
YCP4YCR004C UGA3P26370 528 aa10.79□□□□□ -0.68
YCP4YCR004C YIL089WP40500 205 aa10.79□□□□□ -0.68
YCP4YCR004C FET4P40988 552 aa10.79□□□□□ -0.68
YCP4YCR004C FRD1P32614 470 aaKnown RBP10.78□□□□□ -0.68
YCP4YCR004C TIM50Q02776 476 aa10.78□□□□□ -0.68
YCP4YCR004C GLC3P32775 704 aa10.77□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms