RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W NAB3P38996 802 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
VHC1YBR235W INP52P50942 1183 aa5.29□□□□□ -1.56
VHC1YBR235W YKR023WP36119 530 aaKnown RBP5.29□□□□□ -1.56
VHC1YBR235W RPG1P38249 964 aaKnown RBP5.29□□□□□ -1.56
VHC1YBR235W MTR4P47047 1073 aaKnown RBP5.29□□□□□ -1.56
VHC1YBR235W YPL225WQ08971 146 aaKnown RBP5.29□□□□□ -1.56
VHC1YBR235W GLE1Q12315 538 aa5.29□□□□□ -1.56
VHC1YBR235W PAN1P32521 1480 aa5.28□□□□□ -1.56
VHC1YBR235W SLD2P34252 453 aa5.28□□□□□ -1.56
VHC1YBR235W YMR196WQ04336 1088 aa5.28□□□□□ -1.56
VHC1YBR235W UTP4Q06679 776 aaKnown RBP5.28□□□□□ -1.56
VHC1YBR235W PDI1P17967 522 aaKnown RBP5.28□□□□□ -1.56
VHC1YBR235W NDC80P40460 691 aa5.28□□□□□ -1.56
VHC1YBR235W SPO19Q03029 223 aa5.28□□□□□ -1.56
VHC1YBR235W GYL1Q04322 720 aa5.28□□□□□ -1.56
VHC1YBR235W CIR2Q08822 631 aa5.28□□□□□ -1.56
VHC1YBR235W YKL068W-AQ3E826 78 aa5.28□□□□□ -1.56
VHC1YBR235W REV3P14284 1504 aa5.27□□□□□ -1.57
VHC1YBR235W TIM50Q02776 476 aa5.27□□□□□ -1.57
VHC1YBR235W CDC45Q08032 650 aa5.27□□□□□ -1.57
VHC1YBR235W CYC8P14922 966 aa5.27□□□□□ -1.57
VHC1YBR235W SEC14P24280 304 aaKnown RBP5.27□□□□□ -1.57
VHC1YBR235W BRF1P29056 596 aa5.27□□□□□ -1.57
VHC1YBR235W BRN1P38170 754 aa5.27□□□□□ -1.57
VHC1YBR235W SAP1P39955 897 aaKnown RBP5.27□□□□□ -1.57
VHC1YBR235W HOS4P40480 1083 aa5.27□□□□□ -1.57
VHC1YBR235W IAH1P41734 238 aa5.27□□□□□ -1.57
VHC1YBR235W YGL082WP53155 381 aa5.27□□□□□ -1.57
VHC1YBR235W MHP1P43638 1398 aa5.27□□□□□ -1.57
VHC1YBR235W CLN1P20437 546 aa5.27□□□□□ -1.57
VHC1YBR235W YME2P32843 850 aa5.27□□□□□ -1.57
VHC1YBR235W JJJ1P53863 590 aa5.27□□□□□ -1.57
VHC1YBR235W RRB1Q04225 511 aaKnown RBP5.27□□□□□ -1.57
VHC1YBR235W RAD9P14737 1309 aa5.26□□□□□ -1.57
VHC1YBR235W YJR142WP47173 342 aa5.26□□□□□ -1.57
VHC1YBR235W UBX2Q04228 584 aa5.26□□□□□ -1.57
VHC1YBR235W LSP1Q12230 341 aaKnown RBP5.26□□□□□ -1.57
VHC1YBR235W SCC2Q04002 1493 aa5.26□□□□□ -1.57
VHC1YBR235W MPH1P40562 993 aa5.26□□□□□ -1.57
VHC1YBR235W YRB1P41920 201 aaKnown RBP5.26□□□□□ -1.57
VHC1YBR235W YNL050CP53952 270 aa5.26□□□□□ -1.57
VHC1YBR235W DNA2P38859 1522 aa5.26□□□□□ -1.57
VHC1YBR235W ELM1P32801 640 aa5.25□□□□□ -1.57
VHC1YBR235W NPL4P33755 580 aa5.25□□□□□ -1.57
VHC1YBR235W ALD2P47771 506 aa5.25□□□□□ -1.57
VHC1YBR235W PKH1Q03407 766 aa5.25□□□□□ -1.57
VHC1YBR235W CLF1Q12309 687 aaPredicted RBP5.25□□□□□ -1.57
VHC1YBR235W HSC82P15108 705 aaKnown RBP5.25□□□□□ -1.57
VHC1YBR235W PTH2P34222 208 aa5.25□□□□□ -1.57
VHC1YBR235W RFC5P38251 354 aa5.25□□□□□ -1.57
VHC1YBR235W RFC1P38630 861 aaKnown RBP5.24□□□□□ -1.57
VHC1YBR235W FAP1P53971 965 aa5.24□□□□□ -1.57
VHC1YBR235W SSL2Q00578 843 aa5.24□□□□□ -1.57
VHC1YBR235W BPT1P14772 1559 aa5.24□□□□□ -1.57
VHC1YBR235W SEC23P15303 768 aaKnown RBP5.24□□□□□ -1.57
VHC1YBR235W MSH1P25846 959 aa5.24□□□□□ -1.57
VHC1YBR235W RPL5P26321 297 aaKnown RBP5.24□□□□□ -1.57
VHC1YBR235W UBP14P38237 781 aaKnown RBP5.24□□□□□ -1.57
VHC1YBR235W CEP3P40969 608 aa5.24□□□□□ -1.57
VHC1YBR235W STU2P46675 888 aa5.24□□□□□ -1.57
VHC1YBR235W MSH6Q03834 1242 aa5.24□□□□□ -1.57
VHC1YBR235W SEC20P28791 383 aa5.24□□□□□ -1.57
VHC1YBR235W SEC66P33754 206 aa5.24□□□□□ -1.57
VHC1YBR235W MSB4Q12317 492 aa5.24□□□□□ -1.57
VHC1YBR235W GEA1P47102 1408 aaPredicted RBP5.24□□□□□ -1.57
VHC1YBR235W RAD50P12753 1312 aa5.23□□□□□ -1.57
VHC1YBR235W YML119WQ03208 357 aa5.23□□□□□ -1.57
VHC1YBR235W TFB4Q12004 338 aa5.23□□□□□ -1.57
VHC1YBR235W RVS167P39743 482 aaKnown RBP5.23□□□□□ -1.57
VHC1YBR235W MLP2P40457 1679 aa5.23□□□□□ -1.57
VHC1YBR235W SRS2P12954 1174 aa5.22□□□□□ -1.57
VHC1YBR235W YEL1P34225 687 aa5.22□□□□□ -1.57
VHC1YBR235W RRP1P35178 278 aaPredicted RBP5.22□□□□□ -1.57
VHC1YBR235W SUM1P46676 1062 aa5.22□□□□□ -1.57
VHC1YBR235W KRE28Q04431 385 aa5.22□□□□□ -1.57
VHC1YBR235W CTI6Q08923 506 aa5.22□□□□□ -1.57
VHC1YBR235W NKP1Q12493 238 aa5.22□□□□□ -1.57
VHC1YBR235W SUI2P20459 304 aaKnown RBP5.22□□□□□ -1.57
VHC1YBR235W DID4P36108 232 aa5.22□□□□□ -1.57
VHC1YBR235W ERC1P38767 581 aa5.22□□□□□ -1.57
VHC1YBR235W LSO1Q3E827 93 aa5.22□□□□□ -1.57
VHC1YBR235W RAD16P31244 790 aa5.22□□□□□ -1.57
VHC1YBR235W IOC2Q12072 812 aa5.22□□□□□ -1.57
VHC1YBR235W RTC1Q08281 1341 aa5.22□□□□□ -1.57
VHC1YBR235W CDC60P26637 1090 aaKnown RBP5.21□□□□□ -1.57
VHC1YBR235W CDC3P32457 520 aaKnown RBP5.21□□□□□ -1.57
VHC1YBR235W HAP5Q02516 242 aa5.21□□□□□ -1.57
VHC1YBR235W RPL17AP05740 184 aaKnown RBP5.21□□□□□ -1.58
VHC1YBR235W SSA4P22202 642 aaKnown RBP5.21□□□□□ -1.58
VHC1YBR235W RPN12P32496 274 aa5.21□□□□□ -1.58
VHC1YBR235W HEL1P36113 551 aa5.21□□□□□ -1.58
VHC1YBR235W EXO84P38261 753 aa5.21□□□□□ -1.58
VHC1YBR235W TAF1P46677 1066 aa5.21□□□□□ -1.58
VHC1YBR235W RTF1P53064 558 aa5.21□□□□□ -1.58
VHC1YBR235W HSL1P34244 1518 aa5.21□□□□□ -1.58
VHC1YBR235W UBP13P38187 747 aa5.21□□□□□ -1.58
VHC1YBR235W YLR257WQ06146 321 aaKnown RBP5.21□□□□□ -1.58
VHC1YBR235W PDR18P53756 1333 aa5.21□□□□□ -1.58
VHC1YBR235W NUP170P38181 1502 aa5.21□□□□□ -1.58
VHC1YBR235W IRC20Q06554 1556 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms