RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeastyeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE3YBR130C TRM1P15565 570 aaKnown RBP6.84□□□□□ -1.31
SHE3YBR130C TBF1Q02457 562 aa6.84□□□□□ -1.31
SHE3YBR130C TPD3P31383 635 aa6.83□□□□□ -1.32
SHE3YBR130C KXD1P53158 218 aa6.83□□□□□ -1.32
SHE3YBR130C TIF1P10081 395 aaKnown RBP6.82□□□□□ -1.32
SHE3YBR130C RSC30P38781 883 aa6.82□□□□□ -1.32
SHE3YBR130C SLX8P40072 274 aa6.81□□□□□ -1.32
SHE3YBR130C LCB5Q06147 687 aaKnown RBP6.8□□□□□ -1.32
SHE3YBR130C PDC1P06169 563 aaKnown RBP6.79□□□□□ -1.32
SHE3YBR130C RTG2P32608 588 aaKnown RBP6.79□□□□□ -1.32
SHE3YBR130C YML020WQ03722 664 aa6.79□□□□□ -1.32
SHE3YBR130C SPT5P27692 1063 aaKnown RBP6.78□□□□□ -1.32
SHE3YBR130C RRD1P40454 393 aaKnown RBP6.78□□□□□ -1.32
SHE3YBR130C HXT10P43581 546 aa6.78□□□□□ -1.32
SHE3YBR130C RPL34AP87262 121 aaPredicted RBP6.78□□□□□ -1.32
SHE3YBR130C YPR204WQ08995 1032 aa6.78□□□□□ -1.32
SHE3YBR130C SIS2P36024 562 aa6.77□□□□□ -1.33
SHE3YBR130C SYH1Q02875 849 aaKnown RBP6.77□□□□□ -1.33
SHE3YBR130C YDL206WQ12424 762 aa6.77□□□□□ -1.33
SHE3YBR130C MAK16P10962 306 aaPredicted RBP6.76□□□□□ -1.33
SHE3YBR130C RPA14P50106 137 aa6.76□□□□□ -1.33
SHE3YBR130C BIO2P32451 375 aa6.75□□□□□ -1.33
SHE3YBR130C MSB3P48566 633 aaPredicted RBP6.75□□□□□ -1.33
SHE3YBR130C ALR1Q08269 859 aa6.75□□□□□ -1.33
SHE3YBR130C CPS1P27614 576 aa6.74□□□□□ -1.33
SHE3YBR130C YJR115WP47152 169 aa6.74□□□□□ -1.33
SHE3YBR130C YNL108CP53929 270 aa6.74□□□□□ -1.33
SHE3YBR130C SLD2P34252 453 aa6.73□□□□□ -1.33
SHE3YBR130C TTI1P36097 1038 aa6.73□□□□□ -1.33
SHE3YBR130C NAF1P53919 492 aaKnown RBP6.73□□□□□ -1.33
SHE3YBR130C YPR097WQ06839 1073 aa6.73□□□□□ -1.33
SHE3YBR130C NOP8Q08287 484 aaPredicted RBP6.73□□□□□ -1.33
SHE3YBR130C YPP1P46951 817 aa6.71□□□□□ -1.34
SHE3YBR130C YDL176WQ12027 708 aa6.71□□□□□ -1.34
SHE3YBR130C SUP45P12385 437 aaKnown RBP6.7□□□□□ -1.34
SHE3YBR130C RTT106P40161 455 aa6.7□□□□□ -1.34
SHE3YBR130C UGA3P26370 528 aa6.68□□□□□ -1.34
SHE3YBR130C CDC3P32457 520 aaKnown RBP6.68□□□□□ -1.34
SHE3YBR130C YDJ1P25491 409 aaKnown RBP6.67□□□□□ -1.34
SHE3YBR130C KIP2P28743 706 aa6.67□□□□□ -1.34
SHE3YBR130C YLR346CQ06139 101 aa6.66□□□□□ -1.34
SHE3YBR130C ENO2P00925 437 aaKnown RBP6.65□□□□□ -1.34
SHE3YBR130C TEC1P18412 486 aa6.65□□□□□ -1.34
SHE3YBR130C SRF1Q12516 437 aa6.65□□□□□ -1.34
SHE3YBR130C ENO1P00924 437 aaKnown RBP6.64□□□□□ -1.35
SHE3YBR130C MRT4P33201 236 aaKnown RBP6.64□□□□□ -1.35
SHE3YBR130C IXR1P33417 597 aa6.64□□□□□ -1.35
SHE3YBR130C PTK2P47116 818 aaKnown RBP6.64□□□□□ -1.35
SHE3YBR130C MCM16Q12262 181 aa6.64□□□□□ -1.35
SHE3YBR130C FIG4P42837 879 aa6.63□□□□□ -1.35
SHE3YBR130C NOB1Q08444 459 aaKnown RBP6.63□□□□□ -1.35
SHE3YBR130C GUT2P32191 649 aa6.62□□□□□ -1.35
SHE3YBR130C ACO2P39533 789 aa6.62□□□□□ -1.35
SHE3YBR130C RIM21P48565 533 aa6.62□□□□□ -1.35
SHE3YBR130C VAC17P25591 423 aa6.61□□□□□ -1.35
SHE3YBR130C MRX10Q05648 414 aa6.61□□□□□ -1.35
SHE3YBR130C NUP85P46673 744 aa6.6□□□□□ -1.35
SHE3YBR130C MRX12P47084 519 aa6.6□□□□□ -1.35
SHE3YBR130C STE20Q03497 939 aaKnown RBP6.6□□□□□ -1.35
SHE3YBR130C OPT2Q06593 877 aa6.6□□□□□ -1.35
SHE3YBR130C AIM44Q99299 758 aa6.6□□□□□ -1.35
SHE3YBR130C PUP1P25043 261 aa6.59□□□□□ -1.35
SHE3YBR130C TGL4P36165 910 aa6.59□□□□□ -1.35
SHE3YBR130C GLY1P37303 387 aaKnown RBP6.59□□□□□ -1.35
SHE3YBR130C NOP7P53261 605 aaKnown RBP6.59□□□□□ -1.35
SHE3YBR130C FRA1Q07825 749 aa6.59□□□□□ -1.35
SHE3YBR130C ATG3P40344 310 aa6.58□□□□□ -1.36
SHE3YBR130C EMP47P43555 445 aa6.58□□□□□ -1.36
SHE3YBR130C CAF120P53836 1060 aa6.58□□□□□ -1.36
SHE3YBR130C YPR084WQ06821 456 aa6.58□□□□□ -1.36
SHE3YBR130C ISF1P32488 338 aa6.57□□□□□ -1.36
SHE3YBR130C SSF1P38789 453 aaPredicted RBP6.56□□□□□ -1.36
SHE3YBR130C SNU71P53207 620 aaKnown RBP6.55□□□□□ -1.36
SHE3YBR130C YML083CQ04526 418 aa6.55□□□□□ -1.36
SHE3YBR130C ITT1Q04638 464 aa6.55□□□□□ -1.36
SHE3YBR130C MIP1P15801 1254 aa6.54□□□□□ -1.36
SHE3YBR130C HEM3P28789 327 aa6.54□□□□□ -1.36
SHE3YBR130C SCW11P53189 542 aa6.54□□□□□ -1.36
SHE3YBR130C HAT1Q12341 374 aa6.54□□□□□ -1.36
SHE3YBR130C ARG82P07250 355 aa6.53□□□□□ -1.36
SHE3YBR130C PEP12P32854 288 aa6.53□□□□□ -1.36
SHE3YBR130C RDS2P19541 446 aaKnown RBP6.52□□□□□ -1.37
SHE3YBR130C YBL086CP38177 466 aa6.52□□□□□ -1.37
SHE3YBR130C KTR7P40504 517 aa6.52□□□□□ -1.37
SHE3YBR130C ECM23Q02710 187 aa6.52□□□□□ -1.37
SHE3YBR130C UTP13Q05946 817 aaKnown RBP6.52□□□□□ -1.37
SHE3YBR130C STM1P39015 273 aaKnown RBP6.51□□□□□ -1.37
SHE3YBR130C APL6P46682 809 aa6.51□□□□□ -1.37
SHE3YBR130C APP1P53933 587 aa6.51□□□□□ -1.37
SHE3YBR130C GAL2P13181 574 aa6.5□□□□□ -1.37
SHE3YBR130C ASF1P32447 279 aa6.5□□□□□ -1.37
SHE3YBR130C YGR035CP53222 116 aa6.5□□□□□ -1.37
SHE3YBR130C LSC2P53312 427 aa6.5□□□□□ -1.37
SHE3YBR130C UBP2Q01476 1272 aa6.5□□□□□ -1.37
SHE3YBR130C TY1A-BLQ12266 440 aa6.5□□□□□ -1.37
SHE3YBR130C TRK2P28584 889 aa6.49□□□□□ -1.37
SHE3YBR130C SEC20P28791 383 aa6.49□□□□□ -1.37
SHE3YBR130C UBX7P38349 436 aa6.49□□□□□ -1.37
SHE3YBR130C AAD14P42884 376 aa6.49□□□□□ -1.37
SHE3YBR130C SOH1P38633 127 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms