RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeastyeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE3YBR130C MTC1P47018 478 aaKnown RBP13.91□□□□□ -0.18
SHE3YBR130C FAP1P53971 965 aa13.18□□□□□ -0.3
SHE3YBR130C DRS1P32892 752 aaKnown RBP12.76□□□□□ -0.37
SHE3YBR130C PRY3P47033 881 aa12.45□□□□□ -0.42
SHE3YBR130C PRI1P10363 409 aa11.91□□□□□ -0.5
SHE3YBR130C AAD16Q02895 342 aa11.89□□□□□ -0.51
SHE3YBR130C YCK3P39962 524 aa11.71□□□□□ -0.53
SHE3YBR130C ISW2Q08773 1120 aa11.63□□□□□ -0.55
SHE3YBR130C HAA1Q12753 694 aaKnown RBP11.58□□□□□ -0.56
SHE3YBR130C RPG1P38249 964 aaKnown RBP11.46□□□□□ -0.57
SHE3YBR130C DIP2Q12220 943 aaPredicted RBP11.28□□□□□ -0.6
SHE3YBR130C TSR3Q12094 313 aaKnown RBP11.21□□□□□ -0.61
SHE3YBR130C RSE1Q04693 1361 aaKnown RBP10.95□□□□□ -0.66
SHE3YBR130C AVT3P36062 692 aa10.83□□□□□ -0.68
SHE3YBR130C MRPL32P25348 183 aa10.82□□□□□ -0.68
SHE3YBR130C BFR2Q06631 534 aaKnown RBP10.78□□□□□ -0.68
SHE3YBR130C RPL17AP05740 184 aaKnown RBP10.63□□□□□ -0.71
SHE3YBR130C RPL17BP46990 184 aaKnown RBP10.63□□□□□ -0.71
SHE3YBR130C REB1P21538 810 aa10.59□□□□□ -0.71
SHE3YBR130C YGL015CP33199 130 aa10.5□□□□□ -0.73
SHE3YBR130C CDC27P38042 758 aa10.21□□□□□ -0.77
SHE3YBR130C TFA1P36100 482 aa10.2□□□□□ -0.78
SHE3YBR130C SPT21P35209 758 aa10.19□□□□□ -0.78
SHE3YBR130C BUD31P25337 157 aaPredicted RBP10.16□□□□□ -0.78
SHE3YBR130C YKR023WP36119 530 aaKnown RBP10.12□□□□□ -0.79
SHE3YBR130C UBP10P53874 792 aaPredicted RBP10.02□□□□□ -0.81
SHE3YBR130C HOP09932 586 aa9.91□□□□□ -0.82
SHE3YBR130C MAP2P38174 421 aaKnown RBP9.9□□□□□ -0.82
SHE3YBR130C TFC8Q12308 588 aa9.9□□□□□ -0.82
SHE3YBR130C DCD1P06773 312 aa9.89□□□□□ -0.83
SHE3YBR130C RIM101P33400 625 aa9.77□□□□□ -0.85
SHE3YBR130C SCY1P53009 804 aa9.66□□□□□ -0.86
SHE3YBR130C TIF4632P39936 914 aaKnown RBP9.62□□□□□ -0.87
SHE3YBR130C SLX5P32828 619 aaKnown RBP9.58□□□□□ -0.88
SHE3YBR130C BCH2P36122 765 aa9.57□□□□□ -0.88
SHE3YBR130C TGL3P40308 642 aa9.57□□□□□ -0.88
SHE3YBR130C SIS1P25294 352 aaKnown RBP9.56□□□□□ -0.88
SHE3YBR130C OXP1P28273 1286 aa9.45□□□□□ -0.9
SHE3YBR130C RQC2Q12532 1038 aaKnown RBP9.42□□□□□ -0.9
SHE3YBR130C UBP9P39967 754 aa9.41□□□□□ -0.9
SHE3YBR130C EPS1P40557 701 aa9.31□□□□□ -0.92
SHE3YBR130C BDF1P35817 686 aa9.28□□□□□ -0.92
SHE3YBR130C PTP3P40048 928 aa9.26□□□□□ -0.93
SHE3YBR130C YIL055CP40523 627 aaKnown RBP9.24□□□□□ -0.93
SHE3YBR130C RSM7P47150 247 aa9.15□□□□□ -0.94
SHE3YBR130C MST1P07236 462 aa9.12□□□□□ -0.95
SHE3YBR130C YAH1Q12184 172 aaKnown RBP9.12□□□□□ -0.95
SHE3YBR130C BBC1P47068 1157 aa9.1□□□□□ -0.95
SHE3YBR130C AI2P03876 854 aa9.08□□□□□ -0.96
SHE3YBR130C NSR1P27476 414 aaKnown RBP RIP-Chip data9.08□□□□□ -0.96not detected
SHE3YBR130C YOR238WQ08634 303 aa9.08□□□□□ -0.96
SHE3YBR130C YLR271WQ06152 274 aa8.98□□□□□ -0.97
SHE3YBR130C YAP5P40574 245 aa8.97□□□□□ -0.97
SHE3YBR130C YBL029C-AQ3E756 94 aa8.96□□□□□ -0.98
SHE3YBR130C VNX1P42839 908 aa8.89□□□□□ -0.99
SHE3YBR130C PSD2P53037 1138 aaKnown RBP8.87□□□□□ -0.99
SHE3YBR130C SPP1Q03012 353 aa8.81□□□□□ -1
SHE3YBR130C SSP1P38871 571 aa8.77□□□□□ -1.01
SHE3YBR130C GTT3P39996 337 aa8.77□□□□□ -1.01
SHE3YBR130C WSC3Q12215 556 aa8.77□□□□□ -1.01
SHE3YBR130C MRM1P25270 412 aa8.75□□□□□ -1.01
SHE3YBR130C TIF11P38912 153 aaKnown RBP8.73□□□□□ -1.01
SHE3YBR130C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.71□□□□□ -1.02not detected
SHE3YBR130C PIB1Q06651 286 aa8.7□□□□□ -1.02
SHE3YBR130C CST9Q06032 482 aa8.65□□□□□ -1.02
SHE3YBR130C FKH1P40466 484 aa8.64□□□□□ -1.03
SHE3YBR130C AIR2Q12476 344 aaKnown RBP8.64□□□□□ -1.03
SHE3YBR130C YJL171CP46992 396 aa8.63□□□□□ -1.03
SHE3YBR130C MSB4Q12317 492 aa8.6□□□□□ -1.03
SHE3YBR130C MGA2P40578 1113 aa8.59□□□□□ -1.03
SHE3YBR130C ULI1P43604 169 aa8.59□□□□□ -1.03
SHE3YBR130C DMA1P38823 416 aa8.58□□□□□ -1.04
SHE3YBR130C VPS29P38759 282 aa8.57□□□□□ -1.04
SHE3YBR130C LDB19Q12502 818 aa8.57□□□□□ -1.04
SHE3YBR130C EAP1P36041 632 aaKnown RBP8.56□□□□□ -1.04
SHE3YBR130C IOC2Q12072 812 aa8.56□□□□□ -1.04
SHE3YBR130C YMR1P47147 688 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
SHE3YBR130C DBP1P24784 617 aaKnown RBP8.52□□□□□ -1.05
SHE3YBR130C RTG3P38165 486 aa8.52□□□□□ -1.05
SHE3YBR130C YFR006WP43590 535 aa8.51□□□□□ -1.05
SHE3YBR130C STS1P38637 319 aa8.5□□□□□ -1.05
SHE3YBR130C RCR1P38212 213 aa8.48□□□□□ -1.05
SHE3YBR130C YOL036WQ08206 761 aa8.48□□□□□ -1.05
SHE3YBR130C BMT6Q12291 365 aa8.48□□□□□ -1.05
SHE3YBR130C SET4P42948 560 aa8.46□□□□□ -1.06
SHE3YBR130C VMA1P17255 1071 aaKnown RBP8.44□□□□□ -1.06
SHE3YBR130C TRP5P00931 707 aaKnown RBP8.41□□□□□ -1.06
SHE3YBR130C SAM3Q08986 587 aa8.41□□□□□ -1.06
SHE3YBR130C RTG1P32607 177 aa8.4□□□□□ -1.06
SHE3YBR130C SEC61P32915 480 aa8.38□□□□□ -1.07
SHE3YBR130C NCR1Q12200 1170 aa8.38□□□□□ -1.07
SHE3YBR130C YNL035CP53962 389 aaKnown RBP8.37□□□□□ -1.07
SHE3YBR130C ABP1P15891 592 aaKnown RBP8.34□□□□□ -1.07
SHE3YBR130C TFG1P41895 735 aaPredicted RBP8.29□□□□□ -1.08
SHE3YBR130C JIP4Q03361 876 aa8.28□□□□□ -1.08
SHE3YBR130C TAF7Q05021 590 aa8.26□□□□□ -1.09
SHE3YBR130C GYP5Q12344 894 aa8.26□□□□□ -1.09
SHE3YBR130C HTA1P04911 132 aaKnown RBP8.23□□□□□ -1.09
SHE3YBR130C HTA2P04912 132 aa8.23□□□□□ -1.09
SHE3YBR130C DAN4P47179 1161 aa8.23□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms