RNA–Protein interactions for RNA: ENST00000639941.1

SHISA9-205, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHISA9, Length 1,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-205ENST00000639941 EIF2AK4Q9P2K8 1649 aaKnown RBP34.99■■■■□ 3.19
SHISA9-205ENST00000639941 KDM5DQ9BY66 1539 aa34.98■■■■□ 3.19
SHISA9-205ENST00000639941 DUOX2Q9NRD8 1548 aa34.97■■■■□ 3.19
SHISA9-205ENST00000639941 FAM135AQ9P2D6 1515 aa34.96■■■■□ 3.19
SHISA9-205ENST00000639941 KIF15Q9NS87 1388 aa34.95■■■■□ 3.19
SHISA9-205ENST00000639941 MROH1Q8NDA8 1641 aa34.95■■■■□ 3.18
SHISA9-205ENST00000639941 PPARGC1BQ86YN6 1023 aaKnown RBP34.92■■■■□ 3.18
SHISA9-205ENST00000639941 RRP7BPQ9NSQ0 103 aa34.91■■■■□ 3.18
SHISA9-205ENST00000639941 STRCQ7RTU9 1775 aa34.9■■■■□ 3.18
SHISA9-205ENST00000639941 MYO3AQ8NEV4 1616 aa34.89■■■■□ 3.18
SHISA9-205ENST00000639941 FAM50AQ14320 339 aaKnown RBP34.89■■■■□ 3.18
SHISA9-205ENST00000639941 CHIC2Q9UKJ5 165 aa34.89■■■■□ 3.18
SHISA9-205ENST00000639941 WASHC2CQ9Y4E1 1318 aa34.88■■■■□ 3.17
SHISA9-205ENST00000639941 ABCC3O15438 1527 aa34.86■■■■□ 3.17
SHISA9-205ENST00000639941 ERBINQ96RT1 1412 aa34.86■■■■□ 3.17
SHISA9-205ENST00000639941 PZPP20742 1482 aa34.85■■■■□ 3.17
SHISA9-205ENST00000639941 NCOA1Q15788 1441 aa34.84■■■■□ 3.17
SHISA9-205ENST00000639941 ZNF142P52746 1687 aaPredicted RBP34.84■■■■□ 3.17
SHISA9-205ENST00000639941 ADGRL2O95490 1459 aa34.84■■■■□ 3.17
SHISA9-205ENST00000639941 FBXO31Q5XUX0 539 aaPredicted RBP34.83■■■■□ 3.17
SHISA9-205ENST00000639941 ANKRD30AQ9BXX3 1397 aa34.82■■■■□ 3.16
SHISA9-205ENST00000639941 ZC3H13Q5T200 1668 aaKnown RBP34.82■■■■□ 3.16
SHISA9-205ENST00000639941 CEP152O94986 1710 aa34.8■■■■□ 3.16
SHISA9-205ENST00000639941 CEP170BQ9Y4F5 1589 aaPredicted RBP34.79■■■■□ 3.16
SHISA9-205ENST00000639941 PRDM15P57071 1507 aaPredicted RBP34.79■■■■□ 3.16
SHISA9-205ENST00000639941 DEPDC5O75140 1603 aa34.77■■■■□ 3.16
SHISA9-205ENST00000639941 CAMSAP1Q5T5Y3 1602 aa34.75■■■■□ 3.15
SHISA9-205ENST00000639941 TNRQ92752 1358 aa34.74■■■■□ 3.15
SHISA9-205ENST00000639941 A2ML1A8K2U0 1454 aa34.7■■■■□ 3.15
SHISA9-205ENST00000639941 SPATA31D1Q6ZQQ2 1576 aa34.66■■■■□ 3.14
SHISA9-205ENST00000639941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.65■■■■□ 3.14
SHISA9-205ENST00000639941 VWDEQ8N2E2 1590 aa34.65■■■■□ 3.14
SHISA9-205ENST00000639941 ERVK-7P63135 1459 aa34.65■■■■□ 3.14
SHISA9-205ENST00000639941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.63■■■■□ 3.13
SHISA9-205ENST00000639941 ILDR1Q86SU0 546 aaPredicted RBP34.63■■■■□ 3.13
SHISA9-205ENST00000639941 PLA2R1Q13018 1463 aa34.63■■■■□ 3.13
SHISA9-205ENST00000639941 PTPRTO14522 1441 aa34.63■■■■□ 3.13
SHISA9-205ENST00000639941 CFAP65Q6ZU64 1925 aaKnown RBP34.62■■■■□ 3.13
SHISA9-205ENST00000639941 ANKRD50Q9ULJ7 1429 aa34.62■■■■□ 3.13
SHISA9-205ENST00000639941 DMRT2Q9Y5R5 561 aa34.61■■■■□ 3.13
SHISA9-205ENST00000639941 NCKAP5LQ9HCH0 1330 aa34.59■■■■□ 3.13
SHISA9-205ENST00000639941 ARHGAP31Q2M1Z3 1444 aa34.59■■■■□ 3.13
SHISA9-205ENST00000639941 NLRP1Q9C000 1473 aa34.58■■■■□ 3.13
SHISA9-205ENST00000639941 LMTK2Q8IWU2 1503 aa34.58■■■■□ 3.13
SHISA9-205ENST00000639941 ROCK1Q13464 1354 aa34.58■■■■□ 3.13
SHISA9-205ENST00000639941 RRBP1Q9P2E9 1410 aaKnown RBP34.57■■■■□ 3.13
SHISA9-205ENST00000639941 KANK1Q14678 1352 aa34.56■■■■□ 3.12
SHISA9-205ENST00000639941 ITGAEP38570 1179 aa34.54■■■■□ 3.12
SHISA9-205ENST00000639941 UGGT1Q9NYU2 1555 aa34.51■■■■□ 3.12
SHISA9-205ENST00000639941 PKD2Q13563 968 aa34.49■■■■□ 3.11
SHISA9-205ENST00000639941 EFCAB6Q5THR3 1501 aa34.47■■■■□ 3.11
SHISA9-205ENST00000639941 UNC13BO14795 1591 aa34.47■■■■□ 3.11
SHISA9-205ENST00000639941 NEURL4Q96JN8 1562 aa34.45■■■■□ 3.11
SHISA9-205ENST00000639941 POLR1AO95602 1720 aaPredicted RBP34.45■■■■□ 3.11
SHISA9-205ENST00000639941 CERKQ8TCT0 537 aa34.43■■■■□ 3.1
SHISA9-205ENST00000639941 UBR1Q8IWV7 1749 aa34.41■■■■□ 3.1
SHISA9-205ENST00000639941 LTBP4Q8N2S1 1624 aa34.41■■■■□ 3.1
SHISA9-205ENST00000639941 THEMISQ8N1K5 641 aaPredicted RBP34.41■■■■□ 3.1
SHISA9-205ENST00000639941 FBXO41Q8TF61 875 aa34.4■■■■□ 3.1
SHISA9-205ENST00000639941 SYNMO15061 1565 aa34.39■■■■□ 3.1
SHISA9-205ENST00000639941 TET3O43151 1660 aa34.38■■■■□ 3.09
SHISA9-205ENST00000639941 NOS1P29475 1434 aa34.37■■■■□ 3.09
SHISA9-205ENST00000639941 PIK3C2BO00750 1634 aa34.35■■■■□ 3.09
SHISA9-205ENST00000639941 IQGAP3Q86VI3 1631 aa34.33■■■■□ 3.09
SHISA9-205ENST00000639941 GCC2Q8IWJ2 1684 aa34.32■■■■□ 3.08
SHISA9-205ENST00000639941 ANKLE2Q86XL3 938 aa34.32■■■■□ 3.08
SHISA9-205ENST00000639941 ZNF335Q9H4Z2 1342 aaPredicted RBP34.31■■■■□ 3.08
SHISA9-205ENST00000639941 RPRD2Q5VT52 1461 aaKnown RBP34.31■■■■□ 3.08
SHISA9-205ENST00000639941 MED14O60244 1454 aa34.29■■■■□ 3.08
SHISA9-205ENST00000639941 IDI1Q13907 227 aa34.27■■■■□ 3.08
SHISA9-205ENST00000639941 E9PCH4 1651 aa34.27■■■■□ 3.08
SHISA9-205ENST00000639941 ARHGAP23Q9P227 1491 aa34.27■■■■□ 3.08
SHISA9-205ENST00000639941 SLIT1O75093 1534 aa34.25■■■■□ 3.07
SHISA9-205ENST00000639941 NPHP4O75161 1426 aaPredicted RBP34.25■■■■□ 3.07
SHISA9-205ENST00000639941 NAIPQ13075 1403 aa34.25■■■■□ 3.07
SHISA9-205ENST00000639941 NUP155O75694 1391 aa34.23■■■■□ 3.07
SHISA9-205ENST00000639941 KDM5AP29375 1690 aaKnown RBP34.22■■■■□ 3.07
SHISA9-205ENST00000639941 IQGAP1P46940 1657 aa34.22■■■■□ 3.07
SHISA9-205ENST00000639941 LTKP29376 864 aa34.19■■■■□ 3.06
SHISA9-205ENST00000639941 SCAF11Q99590 1463 aaKnown RBP34.19■■■■□ 3.06
SHISA9-205ENST00000639941 ADGRB3O60242 1522 aa34.19■■■■□ 3.06
SHISA9-205ENST00000639941 TMEM2Q9UHN6 1383 aa34.16■■■■□ 3.06
SHISA9-205ENST00000639941 SLC52A1Q9NWF4 448 aa34.15■■■■□ 3.06
SHISA9-205ENST00000639941 HFM1A2PYH4 1435 aa34.14■■■■□ 3.06
SHISA9-205ENST00000639941 STAG3Q9UJ98 1225 aa34.13■■■■□ 3.05
SHISA9-205ENST00000639941 IQSEC2Q5JU85 1478 aa34.13■■■■□ 3.05
SHISA9-205ENST00000639941 TXNDC2Q86VQ3 553 aa34.12■■■■□ 3.05
SHISA9-205ENST00000639941 MYO5BQ9ULV0 1848 aa34.11■■■■□ 3.05
SHISA9-205ENST00000639941 TMEM131LA2VDJ0 1609 aa34.08■■■■□ 3.05
SHISA9-205ENST00000639941 STRCP1A6NGW2 1772 aa34.06■■■■□ 3.04
SHISA9-205ENST00000639941 EID1Q9Y6B2 187 aa34.04■■■■□ 3.04
SHISA9-205ENST00000639941 CPS1P31327 1500 aa34.04■■■■□ 3.04
SHISA9-205ENST00000639941 SPHKAPQ2M3C7 1700 aa34.01■■■■□ 3.03
SHISA9-205ENST00000639941 ZFYVE9O95405 1425 aa34■■■■□ 3.03
SHISA9-205ENST00000639941 RIMS2Q9UQ26 1411 aa33.94■■■■□ 3.02
SHISA9-205ENST00000639941 CHGAP10645 457 aaKnown RBP33.92■■■■□ 3.02
SHISA9-205ENST00000639941 TRIM52Q96A61 297 aa33.91■■■■□ 3.02
SHISA9-205ENST00000639941 LRRC7Q96NW7 1537 aa33.89■■■■□ 3.02
SHISA9-205ENST00000639941 CLTCL1P53675 1640 aa33.88■■■■□ 3.01
SHISA9-205ENST00000639941 TRPM2O94759 1503 aa33.87■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms