RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 KIF15Q9NS87 1388 aa27.64■■■□□ 2.02
SPIN3-220ENST00000639257 NCOA1Q15788 1441 aa27.64■■■□□ 2.02
SPIN3-220ENST00000639257 MROH1Q8NDA8 1641 aa27.63■■■□□ 2.01
SPIN3-220ENST00000639257 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.63■■■□□ 2.01
SPIN3-220ENST00000639257 ERBINQ96RT1 1412 aa27.63■■■□□ 2.01
SPIN3-220ENST00000639257 KDM5DQ9BY66 1539 aa27.62■■■□□ 2.01
SPIN3-220ENST00000639257 PLPPR3Q6T4P5 718 aa27.59■■■□□ 2.01
SPIN3-220ENST00000639257 ANKRD30AQ9BXX3 1397 aa27.59■■■□□ 2.01
SPIN3-220ENST00000639257 PTPRKQ15262 1439 aa27.58■■■□□ 2.01
SPIN3-220ENST00000639257 FAM50AQ14320 339 aaKnown RBP27.57■■■□□ 2
SPIN3-220ENST00000639257 PRDM15P57071 1507 aaPredicted RBP27.56■■■□□ 2
SPIN3-220ENST00000639257 DEPDC5O75140 1603 aa27.56■■■□□ 2
SPIN3-220ENST00000639257 ZC3H13Q5T200 1668 aaKnown RBP27.56■■■□□ 2
SPIN3-220ENST00000639257 PPARGC1BQ86YN6 1023 aaKnown RBP27.55■■■□□ 2
SPIN3-220ENST00000639257 UHRF1BP1Q6BDS2 1440 aa27.55■■■□□ 2
SPIN3-220ENST00000639257 RRBP1Q9P2E9 1410 aaKnown RBP27.55■■■□□ 2
SPIN3-220ENST00000639257 ABCC3O15438 1527 aa27.54■■■□□ 2
SPIN3-220ENST00000639257 RRP7BPQ9NSQ0 103 aa27.54■■■□□ 2
SPIN3-220ENST00000639257 PZPP20742 1482 aa27.52■■■□□ 2
SPIN3-220ENST00000639257 CHIC2Q9UKJ5 165 aa27.51■■□□□ 1.99
SPIN3-220ENST00000639257 ROCK1Q13464 1354 aa27.49■■□□□ 1.99
SPIN3-220ENST00000639257 WASHC2CQ9Y4E1 1318 aa27.49■■□□□ 1.99
SPIN3-220ENST00000639257 HSPA2P54652 639 aa27.48■■□□□ 1.99
SPIN3-220ENST00000639257 VWDEQ8N2E2 1590 aa27.47■■□□□ 1.99
SPIN3-220ENST00000639257 ZNF142P52746 1687 aaPredicted RBP27.46■■□□□ 1.99
SPIN3-220ENST00000639257 MYO3AQ8NEV4 1616 aa27.46■■□□□ 1.99
SPIN3-220ENST00000639257 CEP152O94986 1710 aa27.43■■□□□ 1.98
SPIN3-220ENST00000639257 ANKRD50Q9ULJ7 1429 aa27.42■■□□□ 1.98
SPIN3-220ENST00000639257 CAMSAP1Q5T5Y3 1602 aa27.42■■□□□ 1.98
SPIN3-220ENST00000639257 ARHGAP31Q2M1Z3 1444 aa27.41■■□□□ 1.98
SPIN3-220ENST00000639257 LMTK2Q8IWU2 1503 aa27.41■■□□□ 1.98
SPIN3-220ENST00000639257 SPATA31D1Q6ZQQ2 1576 aa27.4■■□□□ 1.98
SPIN3-220ENST00000639257 CEP170BQ9Y4F5 1589 aaPredicted RBP27.39■■□□□ 1.98
SPIN3-220ENST00000639257 STRCQ7RTU9 1775 aa27.38■■□□□ 1.97
SPIN3-220ENST00000639257 FBXO31Q5XUX0 539 aaPredicted RBP27.38■■□□□ 1.97
SPIN3-220ENST00000639257 TNRQ92752 1358 aa27.36■■□□□ 1.97
SPIN3-220ENST00000639257 A2ML1A8K2U0 1454 aa27.36■■□□□ 1.97
SPIN3-220ENST00000639257 ERVK-7P63135 1459 aa27.35■■□□□ 1.97
SPIN3-220ENST00000639257 UNC13BO14795 1591 aa27.34■■□□□ 1.97
SPIN3-220ENST00000639257 KANK1Q14678 1352 aa27.32■■□□□ 1.96
SPIN3-220ENST00000639257 PLA2R1Q13018 1463 aa27.32■■□□□ 1.96
SPIN3-220ENST00000639257 NLRP1Q9C000 1473 aa27.32■■□□□ 1.96
SPIN3-220ENST00000639257 EFCAB6Q5THR3 1501 aa27.29■■□□□ 1.96
SPIN3-220ENST00000639257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.26■■□□□ 1.95
SPIN3-220ENST00000639257 PTPRTO14522 1441 aa27.24■■□□□ 1.95
SPIN3-220ENST00000639257 ITGAEP38570 1179 aa27.24■■□□□ 1.95
SPIN3-220ENST00000639257 TET3O43151 1660 aa27.22■■□□□ 1.95
SPIN3-220ENST00000639257 RPRD2Q5VT52 1461 aaKnown RBP27.22■■□□□ 1.95
SPIN3-220ENST00000639257 IQGAP3Q86VI3 1631 aa27.21■■□□□ 1.95
SPIN3-220ENST00000639257 NOS1P29475 1434 aa27.21■■□□□ 1.95
SPIN3-220ENST00000639257 NAIPQ13075 1403 aa27.21■■□□□ 1.95
SPIN3-220ENST00000639257 DMRT2Q9Y5R5 561 aa27.2■■□□□ 1.94
SPIN3-220ENST00000639257 GCC2Q8IWJ2 1684 aa27.2■■□□□ 1.94
SPIN3-220ENST00000639257 UGGT1Q9NYU2 1555 aa27.19■■□□□ 1.94
SPIN3-220ENST00000639257 CFAP65Q6ZU64 1925 aaKnown RBP27.18■■□□□ 1.94
SPIN3-220ENST00000639257 HFM1A2PYH4 1435 aa27.17■■□□□ 1.94
SPIN3-220ENST00000639257 PKD2Q13563 968 aa27.16■■□□□ 1.94
SPIN3-220ENST00000639257 SYNMO15061 1565 aa27.16■■□□□ 1.94
SPIN3-220ENST00000639257 UBR1Q8IWV7 1749 aa27.14■■□□□ 1.94
SPIN3-220ENST00000639257 KDM5AP29375 1690 aaKnown RBP27.12■■□□□ 1.93
SPIN3-220ENST00000639257 NEURL4Q96JN8 1562 aa27.12■■□□□ 1.93
SPIN3-220ENST00000639257 THEMISQ8N1K5 641 aaPredicted RBP27.11■■□□□ 1.93
SPIN3-220ENST00000639257 POLR1AO95602 1720 aaPredicted RBP27.1■■□□□ 1.93
SPIN3-220ENST00000639257 E9PCH4 1651 aa27.1■■□□□ 1.93
SPIN3-220ENST00000639257 NCKAP5LQ9HCH0 1330 aa27.1■■□□□ 1.93
SPIN3-220ENST00000639257 NUP155O75694 1391 aa27.09■■□□□ 1.93
SPIN3-220ENST00000639257 PIK3C2BO00750 1634 aa27.08■■□□□ 1.93
SPIN3-220ENST00000639257 MED14O60244 1454 aa27.07■■□□□ 1.92
SPIN3-220ENST00000639257 ARHGAP23Q9P227 1491 aa27.07■■□□□ 1.92
SPIN3-220ENST00000639257 SLIT1O75093 1534 aa27.06■■□□□ 1.92
SPIN3-220ENST00000639257 IDI1Q13907 227 aa27.03■■□□□ 1.92
SPIN3-220ENST00000639257 LTBP4Q8N2S1 1624 aa27.03■■□□□ 1.92
SPIN3-220ENST00000639257 SLC52A1Q9NWF4 448 aa27.03■■□□□ 1.92
SPIN3-220ENST00000639257 ANKLE2Q86XL3 938 aa27.01■■□□□ 1.91
SPIN3-220ENST00000639257 ADGRB3O60242 1522 aa27■■□□□ 1.91
SPIN3-220ENST00000639257 NPHP4O75161 1426 aaPredicted RBP26.96■■□□□ 1.91
SPIN3-220ENST00000639257 TMEM2Q9UHN6 1383 aa26.96■■□□□ 1.91
SPIN3-220ENST00000639257 SCAF11Q99590 1463 aaKnown RBP26.95■■□□□ 1.91
SPIN3-220ENST00000639257 TMEM131LA2VDJ0 1609 aa26.94■■□□□ 1.9
SPIN3-220ENST00000639257 IQGAP1P46940 1657 aa26.93■■□□□ 1.9
SPIN3-220ENST00000639257 CERKQ8TCT0 537 aa26.92■■□□□ 1.9
SPIN3-220ENST00000639257 SPHKAPQ2M3C7 1700 aa26.91■■□□□ 1.9
SPIN3-220ENST00000639257 LTKP29376 864 aa26.91■■□□□ 1.9
SPIN3-220ENST00000639257 ZFYVE9O95405 1425 aa26.88■■□□□ 1.89
SPIN3-220ENST00000639257 ZNF335Q9H4Z2 1342 aaPredicted RBP26.88■■□□□ 1.89
SPIN3-220ENST00000639257 IQSEC2Q5JU85 1478 aa26.87■■□□□ 1.89
SPIN3-220ENST00000639257 MYO5BQ9ULV0 1848 aa26.86■■□□□ 1.89
SPIN3-220ENST00000639257 ILDR1Q86SU0 546 aaPredicted RBP26.86■■□□□ 1.89
SPIN3-220ENST00000639257 TRPM2O94759 1503 aa26.85■■□□□ 1.89
SPIN3-220ENST00000639257 TXNDC2Q86VQ3 553 aa26.85■■□□□ 1.89
SPIN3-220ENST00000639257 FBXO41Q8TF61 875 aa26.85■■□□□ 1.89
SPIN3-220ENST00000639257 STAG3Q9UJ98 1225 aa26.84■■□□□ 1.89
SPIN3-220ENST00000639257 SETD5Q9C0A6 1442 aa26.83■■□□□ 1.89
SPIN3-220ENST00000639257 EID1Q9Y6B2 187 aa26.81■■□□□ 1.88
SPIN3-220ENST00000639257 ACIN1Q9UKV3 1341 aaKnown RBP26.81■■□□□ 1.88
SPIN3-220ENST00000639257 CPS1P31327 1500 aa26.8■■□□□ 1.88
SPIN3-220ENST00000639257 TRIM52Q96A61 297 aa26.79■■□□□ 1.88
SPIN3-220ENST00000639257 CLTCL1P53675 1640 aa26.79■■□□□ 1.88
SPIN3-220ENST00000639257 RIMS2Q9UQ26 1411 aa26.77■■□□□ 1.88
SPIN3-220ENST00000639257 SLC4A1APQ9BWU0 796 aaKnown RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms