RNA–Protein interactions for RNA: ENST00000638306.1

KCNMA1-232, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-232ENST00000638306 HSP90AA2PQ14568 343 aaPredicted RBP16.97■□□□□ 0.31
KCNMA1-232ENST00000638306 DENND4BO75064 1496 aaPredicted RBP16.97■□□□□ 0.31
KCNMA1-232ENST00000638306 PTPRGP23470 1445 aa16.97■□□□□ 0.31
KCNMA1-232ENST00000638306 EFCAB2Q5VUJ9 269 aa16.96■□□□□ 0.31
KCNMA1-232ENST00000638306 NLRP13Q86W25 1043 aa16.96■□□□□ 0.31
KCNMA1-232ENST00000638306 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.96■□□□□ 0.31
KCNMA1-232ENST00000638306 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.96■□□□□ 0.31
KCNMA1-232ENST00000638306 TMF1P82094 1093 aa16.96■□□□□ 0.31
KCNMA1-232ENST00000638306 FYCO1Q9BQS8 1478 aa16.95■□□□□ 0.3
KCNMA1-232ENST00000638306 AFAP1Q8N556 730 aa16.94■□□□□ 0.3
KCNMA1-232ENST00000638306 MYBBP1AQ9BQG0 1328 aaKnown RBP16.93■□□□□ 0.3
KCNMA1-232ENST00000638306 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
KCNMA1-232ENST00000638306 SOX12O15370 315 aa16.93■□□□□ 0.3
KCNMA1-232ENST00000638306 RALBP1Q15311 655 aa16.91■□□□□ 0.3
KCNMA1-232ENST00000638306 HSP90AA1P07900 732 aaKnown RBP16.91■□□□□ 0.3
KCNMA1-232ENST00000638306 ARID4BQ4LE39 1312 aaPredicted RBP16.9■□□□□ 0.3
KCNMA1-232ENST00000638306 SPATA31E1Q6ZUB1 1445 aa16.9■□□□□ 0.3
KCNMA1-232ENST00000638306 SPAG9O60271 1321 aaKnown RBP16.9■□□□□ 0.3
KCNMA1-232ENST00000638306 URB2Q14146 1524 aaKnown RBP16.89■□□□□ 0.3
KCNMA1-232ENST00000638306 C20orf194Q5TEA3 1177 aa16.89■□□□□ 0.29
KCNMA1-232ENST00000638306 GZF1Q9H116 711 aaPredicted RBP16.89■□□□□ 0.29
KCNMA1-232ENST00000638306 U2SURPO15042 1029 aaKnown RBP16.89■□□□□ 0.29
KCNMA1-232ENST00000638306 C8orf34Q49A92 452 aa16.89■□□□□ 0.29
KCNMA1-232ENST00000638306 ADAMTS8Q9UP79 889 aa16.89■□□□□ 0.29
KCNMA1-232ENST00000638306 TRAK1Q9UPV9 953 aa16.89■□□□□ 0.29
KCNMA1-232ENST00000638306 APAF1O14727 1248 aa16.88■□□□□ 0.29
KCNMA1-232ENST00000638306 PNNQ9H307 717 aaKnown RBP16.88■□□□□ 0.29
KCNMA1-232ENST00000638306 ZNF608Q9ULD9 1512 aaPredicted RBP16.88■□□□□ 0.29
KCNMA1-232ENST00000638306 KIF15Q9NS87 1388 aa16.88■□□□□ 0.29
KCNMA1-232ENST00000638306 UPF2Q9HAU5 1272 aaKnown RBP16.87■□□□□ 0.29
KCNMA1-232ENST00000638306 ABCA5Q8WWZ7 1642 aa16.86■□□□□ 0.29
KCNMA1-232ENST00000638306 ZBTB7CA1YPR0 619 aa16.86■□□□□ 0.29
KCNMA1-232ENST00000638306 RRP9O43818 475 aaKnown RBP16.86■□□□□ 0.29
KCNMA1-232ENST00000638306 KDM6BO15054 1643 aa16.85■□□□□ 0.29
KCNMA1-232ENST00000638306 GRIN2BQ13224 1484 aa16.85■□□□□ 0.29
KCNMA1-232ENST00000638306 ABCA10Q8WWZ4 1543 aa16.85■□□□□ 0.29
KCNMA1-232ENST00000638306 FAM161AQ3B820 660 aa16.85■□□□□ 0.29
KCNMA1-232ENST00000638306 PANK2Q9BZ23 570 aa16.84■□□□□ 0.29
KCNMA1-232ENST00000638306 TPRNQ4KMQ1 711 aa16.84■□□□□ 0.29
KCNMA1-232ENST00000638306 COG6Q9Y2V7 657 aa16.84■□□□□ 0.29
KCNMA1-232ENST00000638306 DNMBPQ6XZF7 1577 aa16.83■□□□□ 0.29
KCNMA1-232ENST00000638306 SRPK2P78362 688 aaKnown RBP16.83■□□□□ 0.28
KCNMA1-232ENST00000638306 SNAPC4Q5SXM2 1469 aa16.82■□□□□ 0.28
KCNMA1-232ENST00000638306 LRPPRCP42704 1394 aaKnown RBP16.82■□□□□ 0.28
KCNMA1-232ENST00000638306 ANKRD30BQ9BXX2 1392 aa16.82■□□□□ 0.28
KCNMA1-232ENST00000638306 NUTM2FA1L443 756 aa16.82■□□□□ 0.28
KCNMA1-232ENST00000638306 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
KCNMA1-232ENST00000638306 ANKRD50Q9ULJ7 1429 aa16.82■□□□□ 0.28
KCNMA1-232ENST00000638306 XRCC6P12956 609 aaKnown RBP eCLIP16.81■□□□□ 0.28
KCNMA1-232ENST00000638306 CYB5RLQ6IPT4 315 aa16.81■□□□□ 0.28
KCNMA1-232ENST00000638306 PLB1Q6P1J6 1458 aa16.81■□□□□ 0.28
KCNMA1-232ENST00000638306 C14orf37Q86TY3 774 aa16.81■□□□□ 0.28
KCNMA1-232ENST00000638306 KDM2BQ8NHM5 1336 aa16.8■□□□□ 0.28
KCNMA1-232ENST00000638306 BCORL1Q5H9F3 1711 aa16.8■□□□□ 0.28
KCNMA1-232ENST00000638306 L1TD1Q5T7N2 865 aaKnown RBP16.79■□□□□ 0.28
KCNMA1-232ENST00000638306 FTSJ3Q8IY81 847 aaKnown RBP16.79■□□□□ 0.28
KCNMA1-232ENST00000638306 CCDC144AA2RUR9 1427 aa16.79■□□□□ 0.28
KCNMA1-232ENST00000638306 MORC1Q86VD1 984 aa16.79■□□□□ 0.28
KCNMA1-232ENST00000638306 CDCA8Q53HL2 280 aa16.78■□□□□ 0.28
KCNMA1-232ENST00000638306 POLR1AO95602 1720 aaPredicted RBP16.78■□□□□ 0.28
KCNMA1-232ENST00000638306 BCAR3O75815 825 aa16.78■□□□□ 0.28
KCNMA1-232ENST00000638306 CLCN1P35523 988 aa16.78■□□□□ 0.28
KCNMA1-232ENST00000638306 PANK1Q8TE04 598 aa16.77■□□□□ 0.28
KCNMA1-232ENST00000638306 HECW1Q76N89 1606 aa16.76■□□□□ 0.27
KCNMA1-232ENST00000638306 TEX14Q8IWB6 1497 aa16.76■□□□□ 0.27
KCNMA1-232ENST00000638306 DAPK1P53355 1430 aa16.76■□□□□ 0.27
KCNMA1-232ENST00000638306 EPRSP07814 1512 aaKnown RBP16.76■□□□□ 0.27
KCNMA1-232ENST00000638306 TMEM132EQ6IEE7 984 aa16.76■□□□□ 0.27
KCNMA1-232ENST00000638306 A0A0U1RQG5 324 aaPredicted RBP16.76■□□□□ 0.27
KCNMA1-232ENST00000638306 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
KCNMA1-232ENST00000638306 U2AF1L5P0DN76 240 aaPredicted RBP16.75■□□□□ 0.27
KCNMA1-232ENST00000638306 U2AF1Q01081 240 aaKnown RBP eCLIP16.75■□□□□ 0.27
KCNMA1-232ENST00000638306 ABCC5O15440 1437 aa16.74■□□□□ 0.27
KCNMA1-232ENST00000638306 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
KCNMA1-232ENST00000638306 CENPQQ7L2Z9 268 aaPredicted RBP16.73■□□□□ 0.27
KCNMA1-232ENST00000638306 KANK1Q14678 1352 aa16.72■□□□□ 0.27
KCNMA1-232ENST00000638306 RPRD2Q5VT52 1461 aaKnown RBP16.72■□□□□ 0.27
KCNMA1-232ENST00000638306 APBB1O00213 710 aa16.72■□□□□ 0.27
KCNMA1-232ENST00000638306 GOLGA6L3A6NEY3 463 aa16.72■□□□□ 0.27
KCNMA1-232ENST00000638306 SEC24BO95487 1268 aa16.72■□□□□ 0.27
KCNMA1-232ENST00000638306 BRD4O60885 1362 aaPredicted RBP16.72■□□□□ 0.27
KCNMA1-232ENST00000638306 USP19O94966 1318 aa16.71■□□□□ 0.27
KCNMA1-232ENST00000638306 MFAP1P55081 439 aaKnown RBP16.71■□□□□ 0.27
KCNMA1-232ENST00000638306 CFAP70Q5T0N1 1121 aa16.71■□□□□ 0.27
KCNMA1-232ENST00000638306 PDE3BQ13370 1112 aa16.71■□□□□ 0.27
KCNMA1-232ENST00000638306 BECN1Q14457 450 aa16.71■□□□□ 0.27
KCNMA1-232ENST00000638306 EFCAB5A4FU69 1503 aa16.7■□□□□ 0.26
KCNMA1-232ENST00000638306 CFAP53Q96M91 514 aa16.7■□□□□ 0.26
KCNMA1-232ENST00000638306 ERBB4Q15303 1308 aa16.7■□□□□ 0.26
KCNMA1-232ENST00000638306 ELL2O00472 640 aaPredicted RBP16.7■□□□□ 0.26
KCNMA1-232ENST00000638306 MIA2Q96PC5 1412 aa16.69■□□□□ 0.26
KCNMA1-232ENST00000638306 EHBP1L1Q8N3D4 1523 aa16.69■□□□□ 0.26
KCNMA1-232ENST00000638306 KIAA1107Q9UPP5 1409 aa16.68■□□□□ 0.26
KCNMA1-232ENST00000638306 RSPH4AQ5TD94 716 aa16.68■□□□□ 0.26
KCNMA1-232ENST00000638306 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
KCNMA1-232ENST00000638306 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
KCNMA1-232ENST00000638306 ARHGEF11O15085 1522 aa16.67■□□□□ 0.26
KCNMA1-232ENST00000638306 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.67■□□□□ 0.26
KCNMA1-232ENST00000638306 NCLP19338 710 aaKnown RBP16.66■□□□□ 0.26
KCNMA1-232ENST00000638306 RBM10P98175 930 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms