RNA–Protein interactions for RNA: ENST00000630046.2

SERF2-217, Transcript of small EDRK-rich factor 2, humanhuman

TSL 5 BASIC

Gene SERF2, Length 862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-217ENST00000630046 IQGAP1P46940 1657 aa24.97■■□□□ 1.59
SERF2-217ENST00000630046 UBTFP17480 764 aaKnown RBP24.97■■□□□ 1.59
SERF2-217ENST00000630046 NPHP4O75161 1426 aaPredicted RBP24.96■■□□□ 1.59
SERF2-217ENST00000630046 RGS17Q9UGC6 210 aaPredicted RBP24.96■■□□□ 1.59
SERF2-217ENST00000630046 HNRNPMP52272 730 aaKnown RBP eCLIP24.95■■□□□ 1.58
SERF2-217ENST00000630046 MED14O60244 1454 aa24.95■■□□□ 1.58
SERF2-217ENST00000630046 KIAA1107Q9UPP5 1409 aa24.95■■□□□ 1.58
SERF2-217ENST00000630046 LOC105371045A0A1W2PR82 267 aa24.94■■□□□ 1.58
SERF2-217ENST00000630046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.93■■□□□ 1.585e-37■□□□□ 10.7
SERF2-217ENST00000630046 LRRC7Q96NW7 1537 aa24.92■■□□□ 1.58
SERF2-217ENST00000630046 STRCP1A6NGW2 1772 aa24.92■■□□□ 1.58
SERF2-217ENST00000630046 PZPP20742 1482 aa24.91■■□□□ 1.58
SERF2-217ENST00000630046 THEMISQ8N1K5 641 aaPredicted RBP24.91■■□□□ 1.58
SERF2-217ENST00000630046 FAM135AQ9P2D6 1515 aa24.91■■□□□ 1.58
SERF2-217ENST00000630046 UGGT1Q9NYU2 1555 aa24.9■■□□□ 1.58
SERF2-217ENST00000630046 CASKIN1Q8WXD9 1431 aa24.9■■□□□ 1.58
SERF2-217ENST00000630046 GPATCH8Q9UKJ3 1502 aaKnown RBP24.9■■□□□ 1.58
SERF2-217ENST00000630046 NLRP1Q9C000 1473 aa24.89■■□□□ 1.57
SERF2-217ENST00000630046 KDM5DQ9BY66 1539 aa24.88■■□□□ 1.57
SERF2-217ENST00000630046 EHMT2Q96KQ7 1210 aa24.85■■□□□ 1.57
SERF2-217ENST00000630046 FBXO31Q5XUX0 539 aaPredicted RBP24.84■■□□□ 1.57
SERF2-217ENST00000630046 CFDP1Q9UEE9 299 aaPredicted RBP24.83■■□□□ 1.57
SERF2-217ENST00000630046 SETD1AO15047 1707 aaKnown RBP24.82■■□□□ 1.56
SERF2-217ENST00000630046 MIA2Q96PC5 1412 aa24.8■■□□□ 1.56
SERF2-217ENST00000630046 POTEAQ6S8J7 498 aa24.8■■□□□ 1.56
SERF2-217ENST00000630046 FYCO1Q9BQS8 1478 aa24.79■■□□□ 1.56
SERF2-217ENST00000630046 CCNB3Q8WWL7 1395 aa24.78■■□□□ 1.56
SERF2-217ENST00000630046 ZC3H13Q5T200 1668 aaKnown RBP24.77■■□□□ 1.56
SERF2-217ENST00000630046 DHX29Q7Z478 1369 aaKnown RBP24.77■■□□□ 1.56
SERF2-217ENST00000630046 RTEL1-TNFRSF6BF6WH68 1400 aa24.76■■□□□ 1.55
SERF2-217ENST00000630046 WASHC2CQ9Y4E1 1318 aa24.74■■□□□ 1.55
SERF2-217ENST00000630046 XIRP1Q702N8 1843 aaKnown RBP24.74■■□□□ 1.55
SERF2-217ENST00000630046 KIF3BO15066 747 aa24.73■■□□□ 1.55
SERF2-217ENST00000630046 FAM135BQ49AJ0 1406 aa24.69■■□□□ 1.54
SERF2-217ENST00000630046 MBD5Q9P267 1494 aa24.66■■□□□ 1.54
SERF2-217ENST00000630046 SCAF11Q99590 1463 aaKnown RBP24.64■■□□□ 1.54
SERF2-217ENST00000630046 ROBO1Q9Y6N7 1651 aa24.64■■□□□ 1.53
SERF2-217ENST00000630046 UBR1Q8IWV7 1749 aa24.64■■□□□ 1.53
SERF2-217ENST00000630046 TIAM1Q13009 1591 aa24.63■■□□□ 1.53
SERF2-217ENST00000630046 MTUS2Q5JR59 1369 aa24.6■■□□□ 1.53
SERF2-217ENST00000630046 ZNF644Q9H582 1327 aaPredicted RBP24.6■■□□□ 1.53
SERF2-217ENST00000630046 CCDC141Q6ZP82 1450 aa24.59■■□□□ 1.53
SERF2-217ENST00000630046 LRRC9Q6ZRR7 1453 aa24.58■■□□□ 1.52
SERF2-217ENST00000630046 ERVK-7P63135 1459 aa24.57■■□□□ 1.52
SERF2-217ENST00000630046 ABCC3O15438 1527 aa24.55■■□□□ 1.52
SERF2-217ENST00000630046 PHLPP1O60346 1717 aa24.54■■□□□ 1.52
SERF2-217ENST00000630046 CFAP65Q6ZU64 1925 aaKnown RBP24.53■■□□□ 1.52
SERF2-217ENST00000630046 SLIT1O75093 1534 aa24.53■■□□□ 1.52
SERF2-217ENST00000630046 UPF1Q92900 1129 aaKnown RBP eCLIP24.53■■□□□ 1.526e-17■■□□□ 14.1
SERF2-217ENST00000630046 CEP162Q5TB80 1403 aa24.52■■□□□ 1.52
SERF2-217ENST00000630046 ARHGAP23Q9P227 1491 aa24.51■■□□□ 1.51
SERF2-217ENST00000630046 EHBP1L1Q8N3D4 1523 aa24.51■■□□□ 1.51
SERF2-217ENST00000630046 TXNDC2Q86VQ3 553 aa24.5■■□□□ 1.51
SERF2-217ENST00000630046 TMEM94Q12767 1356 aa24.5■■□□□ 1.51
SERF2-217ENST00000630046 JCADQ9P266 1359 aa24.5■■□□□ 1.51
SERF2-217ENST00000630046 NCOA2Q15596 1464 aa24.48■■□□□ 1.51
SERF2-217ENST00000630046 RSPH4AQ5TD94 716 aa24.48■■□□□ 1.51
SERF2-217ENST00000630046 EID1Q9Y6B2 187 aa24.48■■□□□ 1.51
SERF2-217ENST00000630046 MAP3K1Q13233 1512 aa24.47■■□□□ 1.51
SERF2-217ENST00000630046 CEP152O94986 1710 aa24.47■■□□□ 1.51
SERF2-217ENST00000630046 CAMSAP2Q08AD1 1489 aa24.46■■□□□ 1.51
SERF2-217ENST00000630046 LTKP29376 864 aa24.46■■□□□ 1.51
SERF2-217ENST00000630046 EIF2AK4Q9P2K8 1649 aaKnown RBP24.46■■□□□ 1.51
SERF2-217ENST00000630046 ZNF772Q68DY9 489 aaPredicted RBP24.43■■□□□ 1.5
SERF2-217ENST00000630046 ARHGEF5Q12774 1597 aa24.42■■□□□ 1.5
SERF2-217ENST00000630046 TRIM52Q96A61 297 aa24.42■■□□□ 1.5
SERF2-217ENST00000630046 NKTRP30414 1462 aaKnown RBP24.39■■□□□ 1.5
SERF2-217ENST00000630046 TSPY4P0CV99 314 aa24.39■■□□□ 1.49
SERF2-217ENST00000630046 TSPY10P0CW01 314 aa24.39■■□□□ 1.49
SERF2-217ENST00000630046 MEX3CQ5U5Q3 659 aaKnown RBP24.39■■□□□ 1.49
SERF2-217ENST00000630046 PROSER2Q86WR7 435 aaPredicted RBP24.39■■□□□ 1.49
SERF2-217ENST00000630046 PRDM15P57071 1507 aaPredicted RBP24.39■■□□□ 1.49
SERF2-217ENST00000630046 MSH6P52701 1360 aa24.39■■□□□ 1.49
SERF2-217ENST00000630046 COL16A1Q07092 1604 aaPredicted RBP24.39■■□□□ 1.49
SERF2-217ENST00000630046 KCNA6P17658 529 aa24.38■■□□□ 1.49
SERF2-217ENST00000630046 MROH1Q8NDA8 1641 aa24.38■■□□□ 1.49
SERF2-217ENST00000630046 PIK3C2BO00750 1634 aa24.37■■□□□ 1.49
SERF2-217ENST00000630046 SPATA31A6Q5VVP1 1343 aa24.36■■□□□ 1.49
SERF2-217ENST00000630046 KDM5AP29375 1690 aaKnown RBP24.35■■□□□ 1.49
SERF2-217ENST00000630046 NWD1Q149M9 1564 aa24.35■■□□□ 1.49
SERF2-217ENST00000630046 LRP6O75581 1613 aa24.35■■□□□ 1.49
SERF2-217ENST00000630046 FGD6Q6ZV73 1430 aa24.35■■□□□ 1.49
SERF2-217ENST00000630046 TMEM2Q9UHN6 1383 aa24.34■■□□□ 1.49
SERF2-217ENST00000630046 CDK12Q9NYV4 1490 aaPredicted RBP24.33■■□□□ 1.49
SERF2-217ENST00000630046 SLAIN2Q9P270 581 aa24.33■■□□□ 1.49
SERF2-217ENST00000630046 MAST1Q9Y2H9 1570 aa24.33■■□□□ 1.48
SERF2-217ENST00000630046 SHPRHQ149N8 1683 aa24.31■■□□□ 1.48
SERF2-217ENST00000630046 STAG3Q9UJ98 1225 aa24.31■■□□□ 1.48
SERF2-217ENST00000630046 RXRBP28702 533 aa24.3■■□□□ 1.48
SERF2-217ENST00000630046 RBM33Q96EV2 1170 aaKnown RBP24.3■■□□□ 1.48
SERF2-217ENST00000630046 EFCAB6Q5THR3 1501 aa24.3■■□□□ 1.48
SERF2-217ENST00000630046 ARHGAP31Q2M1Z3 1444 aa24.29■■□□□ 1.48
SERF2-217ENST00000630046 TET3O43151 1660 aa24.28■■□□□ 1.48
SERF2-217ENST00000630046 SLC26A8Q96RN1 970 aa24.25■■□□□ 1.47
SERF2-217ENST00000630046 SRCAPQ6ZRS2 3230 aa24.24■■□□□ 1.47
SERF2-217ENST00000630046 AHDC1Q5TGY3 1603 aaPredicted RBP24.22■■□□□ 1.47
SERF2-217ENST00000630046 DUOX2Q9NRD8 1548 aa24.21■■□□□ 1.47
SERF2-217ENST00000630046 CHD2O14647 1828 aaKnown RBP24.19■■□□□ 1.46
SERF2-217ENST00000630046 BCANQ96GW7 911 aa24.17■■□□□ 1.46
SERF2-217ENST00000630046 VPS8Q8N3P4 1428 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms