RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 ANP32CO43423 234 aa5.83□□□□□ -1.48
PTP4A1-205ENST00000626021 DDX10Q13206 875 aaKnown RBP5.83□□□□□ -1.48
PTP4A1-205ENST00000626021 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
PTP4A1-205ENST00000626021 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
PTP4A1-205ENST00000626021 CLASP1Q7Z460 1538 aa5.83□□□□□ -1.48
PTP4A1-205ENST00000626021 KIF14Q15058 1648 aa5.81□□□□□ -1.48
PTP4A1-205ENST00000626021 SPDYE4A6NLX3 237 aa5.81□□□□□ -1.48
PTP4A1-205ENST00000626021 SEC24BO95487 1268 aa5.8□□□□□ -1.48
PTP4A1-205ENST00000626021 CDK11AQ9UQ88 783 aaPredicted RBP5.8□□□□□ -1.48
PTP4A1-205ENST00000626021 MIA2Q96PC5 1412 aa5.8□□□□□ -1.48
PTP4A1-205ENST00000626021 MTUS2Q5JR59 1369 aa5.8□□□□□ -1.48
PTP4A1-205ENST00000626021 PREX2Q70Z35 1606 aa5.8□□□□□ -1.48
PTP4A1-205ENST00000626021 HFM1A2PYH4 1435 aa5.79□□□□□ -1.48
PTP4A1-205ENST00000626021 CARMIL2Q6F5E8 1435 aa5.79□□□□□ -1.48
PTP4A1-205ENST00000626021 IER5LQ5T953 404 aa5.79□□□□□ -1.48
PTP4A1-205ENST00000626021 MYO5CQ9NQX4 1742 aa5.79□□□□□ -1.48
PTP4A1-205ENST00000626021 CDC42BPBQ9Y5S2 1711 aa5.79□□□□□ -1.48
PTP4A1-205ENST00000626021 ERICH6Q7L0X2 663 aa5.78□□□□□ -1.48
PTP4A1-205ENST00000626021 P3H3Q8IVL6 736 aa5.78□□□□□ -1.48
PTP4A1-205ENST00000626021 STAG3Q9UJ98 1225 aa5.78□□□□□ -1.48
PTP4A1-205ENST00000626021 TROQ12816 1431 aaPredicted RBP5.77□□□□□ -1.49
PTP4A1-205ENST00000626021 TIE1P35590 1138 aa5.77□□□□□ -1.49
PTP4A1-205ENST00000626021 SIN3AQ96ST3 1273 aa5.77□□□□□ -1.49
PTP4A1-205ENST00000626021 PPP4R2Q9NY27 417 aa5.77□□□□□ -1.49
PTP4A1-205ENST00000626021 COLQQ9Y215 455 aaPredicted RBP5.77□□□□□ -1.49
PTP4A1-205ENST00000626021 ARHGEF5Q12774 1597 aa5.77□□□□□ -1.49
PTP4A1-205ENST00000626021 RNF166Q96A37 237 aaPredicted RBP5.76□□□□□ -1.49
PTP4A1-205ENST00000626021 TRIM52Q96A61 297 aa5.76□□□□□ -1.49
PTP4A1-205ENST00000626021 ABCC10Q5T3U5 1492 aa5.76□□□□□ -1.49
PTP4A1-205ENST00000626021 PLB1Q6P1J6 1458 aa5.76□□□□□ -1.49
PTP4A1-205ENST00000626021 KDM6BO15054 1643 aa5.76□□□□□ -1.49
PTP4A1-205ENST00000626021 BMP2KQ9NSY1 1161 aaPredicted RBP5.76□□□□□ -1.49
PTP4A1-205ENST00000626021 PTPRKQ15262 1439 aa5.76□□□□□ -1.49
PTP4A1-205ENST00000626021 POLR1AO95602 1720 aaPredicted RBP5.76□□□□□ -1.49
PTP4A1-205ENST00000626021 ZCCHC11Q5TAX3 1644 aaKnown RBP5.76□□□□□ -1.49
PTP4A1-205ENST00000626021 ITGAEP38570 1179 aa5.75□□□□□ -1.49
PTP4A1-205ENST00000626021 MARVELD3Q96A59 401 aa5.75□□□□□ -1.49
PTP4A1-205ENST00000626021 NAIPQ13075 1403 aa5.75□□□□□ -1.49
PTP4A1-205ENST00000626021 ADGRL2O95490 1459 aa5.75□□□□□ -1.49
PTP4A1-205ENST00000626021 SHANK2Q9UPX8 1470 aa5.75□□□□□ -1.49
PTP4A1-205ENST00000626021 ABCC2Q92887 1545 aa5.75□□□□□ -1.49
PTP4A1-205ENST00000626021 CAMSAP2Q08AD1 1489 aa5.75□□□□□ -1.49
PTP4A1-205ENST00000626021 MAST1Q9Y2H9 1570 aa5.74□□□□□ -1.49
PTP4A1-205ENST00000626021 UACAQ9BZF9 1416 aa5.74□□□□□ -1.49
PTP4A1-205ENST00000626021 ERCC6L2Q5T890 1561 aa5.74□□□□□ -1.49
PTP4A1-205ENST00000626021 TTC37Q6PGP7 1564 aa5.73□□□□□ -1.49
PTP4A1-205ENST00000626021 ROCK1Q13464 1354 aa5.73□□□□□ -1.49
PTP4A1-205ENST00000626021 UHRF1BP1LA0JNW5 1464 aa5.73□□□□□ -1.49
PTP4A1-205ENST00000626021 CHMP7Q8WUX9 453 aaPredicted RBP5.73□□□□□ -1.49
PTP4A1-205ENST00000626021 SAMD9LQ8IVG5 1584 aa5.73□□□□□ -1.49
PTP4A1-205ENST00000626021 TONSLQ96HA7 1378 aa5.73□□□□□ -1.49
PTP4A1-205ENST00000626021 DAPK1P53355 1430 aa5.73□□□□□ -1.49
PTP4A1-205ENST00000626021 KDM5BQ9UGL1 1544 aa5.73□□□□□ -1.49
PTP4A1-205ENST00000626021 GPATCH8Q9UKJ3 1502 aaKnown RBP5.73□□□□□ -1.49
PTP4A1-205ENST00000626021 DEKP35659 375 aaKnown RBP5.72□□□□□ -1.49
PTP4A1-205ENST00000626021 PLXNC1O60486 1568 aa5.72□□□□□ -1.49
PTP4A1-205ENST00000626021 PRG4Q92954 1404 aaPredicted RBP5.72□□□□□ -1.49
PTP4A1-205ENST00000626021 ATP10BO94823 1461 aa5.72□□□□□ -1.49
PTP4A1-205ENST00000626021 KDM5DQ9BY66 1539 aa5.72□□□□□ -1.49
PTP4A1-205ENST00000626021 EMP3P54852 163 aa5.72□□□□□ -1.49
PTP4A1-205ENST00000626021 HNRNPUQ00839 825 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTP4A1-205ENST00000626021 PROM2Q8N271 834 aa5.71□□□□□ -1.49
PTP4A1-205ENST00000626021 FBXO3Q9UK99 471 aa5.71□□□□□ -1.49
PTP4A1-205ENST00000626021 HS3ST6Q96QI5 342 aa5.71□□□□□ -1.5
PTP4A1-205ENST00000626021 DENND4BO75064 1496 aaPredicted RBP5.71□□□□□ -1.5
PTP4A1-205ENST00000626021 ARAP3Q8WWN8 1544 aa5.71□□□□□ -1.5
PTP4A1-205ENST00000626021 UNC13BO14795 1591 aa5.71□□□□□ -1.5
PTP4A1-205ENST00000626021 FAM50AQ14320 339 aaKnown RBP5.7□□□□□ -1.5
PTP4A1-205ENST00000626021 ZBED9Q6R2W3 1325 aa5.7□□□□□ -1.5
PTP4A1-205ENST00000626021 ABCC5O15440 1437 aa5.7□□□□□ -1.5
PTP4A1-205ENST00000626021 CNTLNQ9NXG0 1405 aa5.7□□□□□ -1.5
PTP4A1-205ENST00000626021 JPH4Q96JJ6 628 aa5.7□□□□□ -1.5
PTP4A1-205ENST00000626021 NOP58Q9Y2X3 529 aaKnown RBP5.7□□□□□ -1.5
PTP4A1-205ENST00000626021 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTP4A1-205ENST00000626021 ATP1B4Q9UN42 357 aaPredicted RBP5.69□□□□□ -1.5
PTP4A1-205ENST00000626021 ABCA9Q8IUA7 1624 aa5.69□□□□□ -1.5
PTP4A1-205ENST00000626021 PRKCSHP14314 528 aaPredicted RBP5.68□□□□□ -1.5
PTP4A1-205ENST00000626021 HIRIP3Q9BW71 556 aaPredicted RBP5.68□□□□□ -1.5
PTP4A1-205ENST00000626021 PTPRGP23470 1445 aa5.68□□□□□ -1.5
PTP4A1-205ENST00000626021 POTEB3A0JP26 581 aa5.68□□□□□ -1.5
PTP4A1-205ENST00000626021 POTEBQ6S5H4 581 aa5.68□□□□□ -1.5
PTP4A1-205ENST00000626021 RNF123Q5XPI4 1314 aa5.67□□□□□ -1.5
PTP4A1-205ENST00000626021 ABCC1P33527 1531 aa5.67□□□□□ -1.5
PTP4A1-205ENST00000626021 IQGAP3Q86VI3 1631 aa5.67□□□□□ -1.5
PTP4A1-205ENST00000626021 WASHC2AQ641Q2 1341 aa5.67□□□□□ -1.5
PTP4A1-205ENST00000626021 PTGER2P43116 358 aa5.67□□□□□ -1.5
PTP4A1-205ENST00000626021 NCOA1Q15788 1441 aa5.67□□□□□ -1.5
PTP4A1-205ENST00000626021 SMG6Q86US8 1419 aaKnown RBP5.67□□□□□ -1.5
PTP4A1-205ENST00000626021 PZPP20742 1482 aa5.66□□□□□ -1.5
PTP4A1-205ENST00000626021 HSPA5P11021 654 aaKnown RBP5.66□□□□□ -1.5
PTP4A1-205ENST00000626021 EIF4G2P78344 907 aaKnown RBP eCLIP5.66□□□□□ -1.5
PTP4A1-205ENST00000626021 IPO9Q96P70 1041 aaKnown RBP5.66□□□□□ -1.5
PTP4A1-205ENST00000626021 PRKRIP1Q9H875 184 aaPredicted RBP5.66□□□□□ -1.5
PTP4A1-205ENST00000626021 DEPDC5O75140 1603 aa5.66□□□□□ -1.5
PTP4A1-205ENST00000626021 CCDC141Q6ZP82 1450 aa5.66□□□□□ -1.5
PTP4A1-205ENST00000626021 PLEKHH2Q8IVE3 1493 aa5.66□□□□□ -1.5
PTP4A1-205ENST00000626021 PLEKHG5O94827 1062 aa5.66□□□□□ -1.5
PTP4A1-205ENST00000626021 IRX6P78412 446 aaPredicted RBP5.66□□□□□ -1.5
PTP4A1-205ENST00000626021 CFAP74Q9C0B2 1584 aa5.65□□□□□ -1.5
PTP4A1-205ENST00000626021 INO80Q9ULG1 1556 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms