RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 RALGAPBQ86X10 1494 aa27.53■■■□□ 2
PCDHB11-202ENST00000624887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.53■■■□□ 2
PCDHB11-202ENST00000624887 ZFYVE16Q7Z3T8 1539 aa27.53■■■□□ 2
PCDHB11-202ENST00000624887 SPAG9O60271 1321 aaKnown RBP27.53■■■□□ 2
PCDHB11-202ENST00000624887 CCDC144AA2RUR9 1427 aa27.51■■□□□ 1.99
PCDHB11-202ENST00000624887 PLA2R1Q13018 1463 aa27.51■■□□□ 1.99
PCDHB11-202ENST00000624887 ZNF326Q5BKZ1 582 aaKnown RBP27.5■■□□□ 1.99
PCDHB11-202ENST00000624887 CD109Q6YHK3 1445 aa27.5■■□□□ 1.99
PCDHB11-202ENST00000624887 AFAP1Q8N556 730 aa27.49■■□□□ 1.99
PCDHB11-202ENST00000624887 KDM5CP41229 1560 aa27.49■■□□□ 1.99
PCDHB11-202ENST00000624887 USP47Q96K76 1375 aa27.49■■□□□ 1.99
PCDHB11-202ENST00000624887 ATP10AO60312 1499 aa27.47■■□□□ 1.99
PCDHB11-202ENST00000624887 KIF7Q2M1P5 1343 aa27.46■■□□□ 1.99
PCDHB11-202ENST00000624887 INO80Q9ULG1 1556 aaPredicted RBP27.45■■□□□ 1.99
PCDHB11-202ENST00000624887 ADGRL1O94910 1474 aa27.45■■□□□ 1.98
PCDHB11-202ENST00000624887 DCAF11Q8TEB1 546 aa27.44■■□□□ 1.98
PCDHB11-202ENST00000624887 SCAPERQ9BY12 1400 aa27.43■■□□□ 1.98
PCDHB11-202ENST00000624887 ATP7AQ04656 1500 aa27.42■■□□□ 1.98
PCDHB11-202ENST00000624887 KDM2AQ9Y2K7 1162 aa27.4■■□□□ 1.98
PCDHB11-202ENST00000624887 BCORL1Q5H9F3 1711 aa27.4■■□□□ 1.98
PCDHB11-202ENST00000624887 DEPDC5O75140 1603 aa27.39■■□□□ 1.98
PCDHB11-202ENST00000624887 CFAP74Q9C0B2 1584 aa27.39■■□□□ 1.98
PCDHB11-202ENST00000624887 CARD11Q9BXL7 1154 aa27.37■■□□□ 1.97
PCDHB11-202ENST00000624887 ARID4BQ4LE39 1312 aaPredicted RBP27.36■■□□□ 1.97
PCDHB11-202ENST00000624887 GLI2P10070 1586 aa27.36■■□□□ 1.97
PCDHB11-202ENST00000624887 PRAG1Q86YV5 1406 aa27.36■■□□□ 1.97
PCDHB11-202ENST00000624887 A2MP01023 1474 aa27.34■■□□□ 1.97
PCDHB11-202ENST00000624887 TRPM1Q7Z4N2 1603 aa27.34■■□□□ 1.97
PCDHB11-202ENST00000624887 E9PCH4 1651 aa27.33■■□□□ 1.97
PCDHB11-202ENST00000624887 MAP3K4Q9Y6R4 1608 aa27.32■■□□□ 1.96
PCDHB11-202ENST00000624887 EIF2AK4Q9P2K8 1649 aaKnown RBP27.31■■□□□ 1.96
PCDHB11-202ENST00000624887 NEO1Q92859 1461 aa27.31■■□□□ 1.96
PCDHB11-202ENST00000624887 RGL3Q3MIN7 710 aa27.3■■□□□ 1.96
PCDHB11-202ENST00000624887 ROCK2O75116 1388 aaKnown RBP27.3■■□□□ 1.96
PCDHB11-202ENST00000624887 PRKRIP1Q9H875 184 aaPredicted RBP27.29■■□□□ 1.96
PCDHB11-202ENST00000624887 ZNF518AQ6AHZ1 1483 aa27.29■■□□□ 1.96
PCDHB11-202ENST00000624887 VWDEQ8N2E2 1590 aa27.29■■□□□ 1.96
PCDHB11-202ENST00000624887 DHX29Q7Z478 1369 aaKnown RBP27.29■■□□□ 1.96
PCDHB11-202ENST00000624887 DIP2BQ9P265 1576 aa27.27■■□□□ 1.96
PCDHB11-202ENST00000624887 TET3O43151 1660 aa27.27■■□□□ 1.96
PCDHB11-202ENST00000624887 KIDINS220Q9ULH0 1771 aa27.26■■□□□ 1.95
PCDHB11-202ENST00000624887 TRPM2O94759 1503 aa27.26■■□□□ 1.95
PCDHB11-202ENST00000624887 FAM69CQ0P6D2 419 aa27.26■■□□□ 1.95
PCDHB11-202ENST00000624887 POGZQ7Z3K3 1410 aa27.25■■□□□ 1.95
PCDHB11-202ENST00000624887 GPRASP1Q5JY77 1395 aa27.25■■□□□ 1.95
PCDHB11-202ENST00000624887 PTPRTO14522 1441 aa27.25■■□□□ 1.95
PCDHB11-202ENST00000624887 KANK1Q14678 1352 aa27.24■■□□□ 1.95
PCDHB11-202ENST00000624887 LAMC1P11047 1609 aa27.24■■□□□ 1.95
PCDHB11-202ENST00000624887 ST20-MTHFSA0A0A6YYL1 179 aa27.24■■□□□ 1.95
PCDHB11-202ENST00000624887 MYT1LQ9UL68 1186 aa27.24■■□□□ 1.95
PCDHB11-202ENST00000624887 SPHKAPQ2M3C7 1700 aa27.24■■□□□ 1.95
PCDHB11-202ENST00000624887 PRDM15P57071 1507 aaPredicted RBP27.24■■□□□ 1.95
PCDHB11-202ENST00000624887 MYT1Q01538 1121 aa27.22■■□□□ 1.95
PCDHB11-202ENST00000624887 KIF3BO15066 747 aa27.21■■□□□ 1.95
PCDHB11-202ENST00000624887 MROH1Q8NDA8 1641 aa27.21■■□□□ 1.95
PCDHB11-202ENST00000624887 CEP152O94986 1710 aa27.19■■□□□ 1.94
PCDHB11-202ENST00000624887 NBPF1Q3BBV0 1214 aa27.17■■□□□ 1.94
PCDHB11-202ENST00000624887 MLH3Q9UHC1 1453 aa27.17■■□□□ 1.94
PCDHB11-202ENST00000624887 POLR3GLQ9BT43 218 aa27.15■■□□□ 1.94
PCDHB11-202ENST00000624887 CLTCL1P53675 1640 aa27.15■■□□□ 1.94
PCDHB11-202ENST00000624887 CCDC184Q52MB2 194 aa27.14■■□□□ 1.94
PCDHB11-202ENST00000624887 SUPT16HQ9Y5B9 1047 aaKnown RBP27.13■■□□□ 1.93
PCDHB11-202ENST00000624887 HECW2Q9P2P5 1572 aa27.12■■□□□ 1.93
PCDHB11-202ENST00000624887 RNF17Q9BXT8 1623 aaKnown RBP27.11■■□□□ 1.93
PCDHB11-202ENST00000624887 RAPGEF3O95398 923 aa27.11■■□□□ 1.93
PCDHB11-202ENST00000624887 STAC3Q96MF2 364 aa27.1■■□□□ 1.93
PCDHB11-202ENST00000624887 NEURL4Q96JN8 1562 aa27.09■■□□□ 1.93
PCDHB11-202ENST00000624887 EFCAB6Q5THR3 1501 aa27.09■■□□□ 1.93
PCDHB11-202ENST00000624887 LMTK2Q8IWU2 1503 aa27.09■■□□□ 1.93
PCDHB11-202ENST00000624887 MADDQ8WXG6 1647 aa27.09■■□□□ 1.93
PCDHB11-202ENST00000624887 MRS2Q9HD23 443 aa27.09■■□□□ 1.93
PCDHB11-202ENST00000624887 HNRNPUQ00839 825 aaKnown RBP eCLIP27.08■■□□□ 1.93
PCDHB11-202ENST00000624887 PPRC1Q5VV67 1664 aaKnown RBP27.07■■□□□ 1.92
PCDHB11-202ENST00000624887 RICTORQ6R327 1708 aa27.06■■□□□ 1.92
PCDHB11-202ENST00000624887 FRMPD1Q5SYB0 1578 aa27.06■■□□□ 1.92
PCDHB11-202ENST00000624887 TSPOAP1O95153 1857 aa27.03■■□□□ 1.92
PCDHB11-202ENST00000624887 KIF13AQ9H1H9 1805 aa27.02■■□□□ 1.92
PCDHB11-202ENST00000624887 COL17A1Q9UMD9 1497 aaPredicted RBP27.02■■□□□ 1.92
PCDHB11-202ENST00000624887 TESK2Q96S53 571 aa27.01■■□□□ 1.91
PCDHB11-202ENST00000624887 ABCA6Q8N139 1617 aa27.01■■□□□ 1.91
PCDHB11-202ENST00000624887 FAM9BQ8IZU0 186 aa26.98■■□□□ 1.91
PCDHB11-202ENST00000624887 IQGAP1P46940 1657 aa26.97■■□□□ 1.91
PCDHB11-202ENST00000624887 KIF1BO60333 1816 aa26.97■■□□□ 1.91
PCDHB11-202ENST00000624887 KTN1Q86UP2 1357 aaKnown RBP26.96■■□□□ 1.91
PCDHB11-202ENST00000624887 UGGT1Q9NYU2 1555 aa26.96■■□□□ 1.91
PCDHB11-202ENST00000624887 DIP2CQ9Y2E4 1556 aa26.95■■□□□ 1.9
PCDHB11-202ENST00000624887 ZMYM4Q5VZL5 1548 aa26.94■■□□□ 1.9
PCDHB11-202ENST00000624887 KIAA1210Q9ULL0 1709 aa26.94■■□□□ 1.9
PCDHB11-202ENST00000624887 DISP3Q9P2K9 1392 aa26.94■■□□□ 1.9
PCDHB11-202ENST00000624887 MYOM2P54296 1465 aa26.91■■□□□ 1.9
PCDHB11-202ENST00000624887 YEATS2Q9ULM3 1422 aa26.91■■□□□ 1.9
PCDHB11-202ENST00000624887 TMF1P82094 1093 aa26.91■■□□□ 1.9
PCDHB11-202ENST00000624887 RALBP1Q15311 655 aa26.89■■□□□ 1.9
PCDHB11-202ENST00000624887 IFT172Q9UG01 1749 aa26.89■■□□□ 1.9
PCDHB11-202ENST00000624887 SCAF11Q99590 1463 aaKnown RBP26.89■■□□□ 1.9
PCDHB11-202ENST00000624887 CNGB1Q14028 1251 aaPredicted RBP26.89■■□□□ 1.89
PCDHB11-202ENST00000624887 NPATQ14207 1427 aa26.89■■□□□ 1.89
PCDHB11-202ENST00000624887 GGT6Q6P531 493 aa26.89■■□□□ 1.89
PCDHB11-202ENST00000624887 FKBP8Q14318 412 aa26.88■■□□□ 1.89
PCDHB11-202ENST00000624887 ABCC3O15438 1527 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms