RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 KIF3BO15066 747 aa19.28■□□□□ 0.68
LINC00963-217ENST00000624009 ZC3H13Q5T200 1668 aaKnown RBP19.27■□□□□ 0.68
LINC00963-217ENST00000624009 ERBINQ96RT1 1412 aa19.26■□□□□ 0.67
LINC00963-217ENST00000624009 PLPPR3Q6T4P5 718 aa19.26■□□□□ 0.67
LINC00963-217ENST00000624009 PTPRKQ15262 1439 aa19.25■□□□□ 0.67
LINC00963-217ENST00000624009 ADGRL2O95490 1459 aa19.24■□□□□ 0.67
LINC00963-217ENST00000624009 KIF15Q9NS87 1388 aa19.24■□□□□ 0.67
LINC00963-217ENST00000624009 ZNF142P52746 1687 aaPredicted RBP19.24■□□□□ 0.67
LINC00963-217ENST00000624009 ANKRD30AQ9BXX3 1397 aa19.23■□□□□ 0.67
LINC00963-217ENST00000624009 PZPP20742 1482 aa19.22■□□□□ 0.67
LINC00963-217ENST00000624009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.22■□□□□ 0.67
LINC00963-217ENST00000624009 NCOA1Q15788 1441 aa19.21■□□□□ 0.67
LINC00963-217ENST00000624009 DEPDC5O75140 1603 aa19.21■□□□□ 0.67
LINC00963-217ENST00000624009 MROH1Q8NDA8 1641 aa19.21■□□□□ 0.67
LINC00963-217ENST00000624009 WASHC2CQ9Y4E1 1318 aa19.21■□□□□ 0.67
LINC00963-217ENST00000624009 PRDM15P57071 1507 aaPredicted RBP19.2■□□□□ 0.66
LINC00963-217ENST00000624009 HSPA2P54652 639 aa19.2■□□□□ 0.66
LINC00963-217ENST00000624009 MYO3AQ8NEV4 1616 aa19.2■□□□□ 0.66
LINC00963-217ENST00000624009 ABCC3O15438 1527 aa19.19■□□□□ 0.66
LINC00963-217ENST00000624009 STRCQ7RTU9 1775 aa19.19■□□□□ 0.66
LINC00963-217ENST00000624009 DMRT2Q9Y5R5 561 aa19.16■□□□□ 0.66
LINC00963-217ENST00000624009 CEP170BQ9Y4F5 1589 aaPredicted RBP19.15■□□□□ 0.66
LINC00963-217ENST00000624009 FAM50AQ14320 339 aaKnown RBP19.15■□□□□ 0.66
LINC00963-217ENST00000624009 RRP7BPQ9NSQ0 103 aa19.15■□□□□ 0.66
LINC00963-217ENST00000624009 PLA2R1Q13018 1463 aa19.14■□□□□ 0.65
LINC00963-217ENST00000624009 ROCK1Q13464 1354 aa19.13■□□□□ 0.65
LINC00963-217ENST00000624009 ARHGAP31Q2M1Z3 1444 aa19.13■□□□□ 0.65
LINC00963-217ENST00000624009 A2ML1A8K2U0 1454 aa19.13■□□□□ 0.65
LINC00963-217ENST00000624009 CAMSAP1Q5T5Y3 1602 aa19.13■□□□□ 0.65
LINC00963-217ENST00000624009 CEP152O94986 1710 aa19.13■□□□□ 0.65
LINC00963-217ENST00000624009 NLRP1Q9C000 1473 aa19.12■□□□□ 0.65
LINC00963-217ENST00000624009 SPATA31D1Q6ZQQ2 1576 aa19.11■□□□□ 0.65
LINC00963-217ENST00000624009 VWDEQ8N2E2 1590 aa19.11■□□□□ 0.65
LINC00963-217ENST00000624009 PTPRTO14522 1441 aa19.11■□□□□ 0.65
LINC00963-217ENST00000624009 TNRQ92752 1358 aa19.11■□□□□ 0.65
LINC00963-217ENST00000624009 LMTK2Q8IWU2 1503 aa19.1■□□□□ 0.65
LINC00963-217ENST00000624009 CHIC2Q9UKJ5 165 aa19.1■□□□□ 0.65
LINC00963-217ENST00000624009 CFAP65Q6ZU64 1925 aaKnown RBP19.1■□□□□ 0.65
LINC00963-217ENST00000624009 KANK1Q14678 1352 aa19.09■□□□□ 0.65
LINC00963-217ENST00000624009 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.65
LINC00963-217ENST00000624009 ANKRD50Q9ULJ7 1429 aa19.08■□□□□ 0.65
LINC00963-217ENST00000624009 ERVK-7P63135 1459 aa19.06■□□□□ 0.64
LINC00963-217ENST00000624009 FBXO31Q5XUX0 539 aaPredicted RBP19.06■□□□□ 0.64
LINC00963-217ENST00000624009 PKD2Q13563 968 aa19.05■□□□□ 0.64
LINC00963-217ENST00000624009 UNC13BO14795 1591 aa19.02■□□□□ 0.64
LINC00963-217ENST00000624009 POLR1AO95602 1720 aaPredicted RBP19.02■□□□□ 0.63
LINC00963-217ENST00000624009 UGGT1Q9NYU2 1555 aa19.01■□□□□ 0.63
LINC00963-217ENST00000624009 EFCAB6Q5THR3 1501 aa19■□□□□ 0.63
LINC00963-217ENST00000624009 RPRD2Q5VT52 1461 aaKnown RBP19■□□□□ 0.63
LINC00963-217ENST00000624009 KDM5AP29375 1690 aaKnown RBP19■□□□□ 0.63
LINC00963-217ENST00000624009 THEMISQ8N1K5 641 aaPredicted RBP18.99■□□□□ 0.63
LINC00963-217ENST00000624009 TET3O43151 1660 aa18.98■□□□□ 0.63
LINC00963-217ENST00000624009 GCC2Q8IWJ2 1684 aa18.98■□□□□ 0.63
LINC00963-217ENST00000624009 PPARGC1BQ86YN6 1023 aaKnown RBP18.97■□□□□ 0.63
LINC00963-217ENST00000624009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.97■□□□□ 0.63
LINC00963-217ENST00000624009 UBR1Q8IWV7 1749 aa18.96■□□□□ 0.63
LINC00963-217ENST00000624009 IQGAP3Q86VI3 1631 aa18.95■□□□□ 0.62
LINC00963-217ENST00000624009 NOS1P29475 1434 aa18.94■□□□□ 0.62
LINC00963-217ENST00000624009 MED14O60244 1454 aa18.94■□□□□ 0.62
LINC00963-217ENST00000624009 FBXO41Q8TF61 875 aa18.93■□□□□ 0.62
LINC00963-217ENST00000624009 NEURL4Q96JN8 1562 aa18.93■□□□□ 0.62
LINC00963-217ENST00000624009 ANKLE2Q86XL3 938 aa18.92■□□□□ 0.62
LINC00963-217ENST00000624009 NCKAP5LQ9HCH0 1330 aa18.92■□□□□ 0.62
LINC00963-217ENST00000624009 IQSEC2Q5JU85 1478 aa18.91■□□□□ 0.62
LINC00963-217ENST00000624009 CERKQ8TCT0 537 aa18.91■□□□□ 0.62
LINC00963-217ENST00000624009 LTBP4Q8N2S1 1624 aa18.91■□□□□ 0.62
LINC00963-217ENST00000624009 SLIT1O75093 1534 aa18.9■□□□□ 0.62
LINC00963-217ENST00000624009 ILDR1Q86SU0 546 aaPredicted RBP18.9■□□□□ 0.62
LINC00963-217ENST00000624009 SLC52A1Q9NWF4 448 aa18.9■□□□□ 0.62
LINC00963-217ENST00000624009 SYNMO15061 1565 aa18.89■□□□□ 0.62
LINC00963-217ENST00000624009 ARHGAP23Q9P227 1491 aa18.89■□□□□ 0.61
LINC00963-217ENST00000624009 PIK3C2BO00750 1634 aa18.89■□□□□ 0.61
LINC00963-217ENST00000624009 E9PCH4 1651 aa18.87■□□□□ 0.61
LINC00963-217ENST00000624009 ITGAEP38570 1179 aa18.87■□□□□ 0.61
LINC00963-217ENST00000624009 IQGAP1P46940 1657 aa18.87■□□□□ 0.61
LINC00963-217ENST00000624009 HFM1A2PYH4 1435 aa18.86■□□□□ 0.61
LINC00963-217ENST00000624009 NAIPQ13075 1403 aa18.86■□□□□ 0.61
LINC00963-217ENST00000624009 NPHP4O75161 1426 aaPredicted RBP18.84■□□□□ 0.61
LINC00963-217ENST00000624009 NUP155O75694 1391 aa18.84■□□□□ 0.61
LINC00963-217ENST00000624009 ADGRB3O60242 1522 aa18.84■□□□□ 0.61
LINC00963-217ENST00000624009 SCAF11Q99590 1463 aaKnown RBP18.84■□□□□ 0.61
LINC00963-217ENST00000624009 IDI1Q13907 227 aa18.83■□□□□ 0.6
LINC00963-217ENST00000624009 TMEM2Q9UHN6 1383 aa18.82■□□□□ 0.6
LINC00963-217ENST00000624009 CPS1P31327 1500 aa18.8■□□□□ 0.6
LINC00963-217ENST00000624009 STAG3Q9UJ98 1225 aa18.79■□□□□ 0.6
LINC00963-217ENST00000624009 EID1Q9Y6B2 187 aa18.79■□□□□ 0.6
LINC00963-217ENST00000624009 ZNF335Q9H4Z2 1342 aaPredicted RBP18.78■□□□□ 0.6
LINC00963-217ENST00000624009 SPHKAPQ2M3C7 1700 aa18.77■□□□□ 0.6
LINC00963-217ENST00000624009 ACIN1Q9UKV3 1341 aaKnown RBP18.77■□□□□ 0.6
LINC00963-217ENST00000624009 MYO5BQ9ULV0 1848 aa18.77■□□□□ 0.6
LINC00963-217ENST00000624009 TMEM131LA2VDJ0 1609 aa18.77■□□□□ 0.6
LINC00963-217ENST00000624009 LTKP29376 864 aa18.75■□□□□ 0.59
LINC00963-217ENST00000624009 TXNDC2Q86VQ3 553 aa18.75■□□□□ 0.59
LINC00963-217ENST00000624009 HDGFP51858 240 aaKnown RBP18.73■□□□□ 0.59
LINC00963-217ENST00000624009 ZFYVE9O95405 1425 aa18.72■□□□□ 0.59
LINC00963-217ENST00000624009 TRPM2O94759 1503 aa18.69■□□□□ 0.58
LINC00963-217ENST00000624009 STRCP1A6NGW2 1772 aa18.69■□□□□ 0.58
LINC00963-217ENST00000624009 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.67■□□□□ 0.58
LINC00963-217ENST00000624009 PLEKHG1Q9ULL1 1385 aa18.67■□□□□ 0.58
LINC00963-217ENST00000624009 RIMS2Q9UQ26 1411 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms