RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 ABCC5O15440 1437 aa10.83□□□□□ -0.68
PSMB3-212ENST00000620309 ZNF335Q9H4Z2 1342 aaPredicted RBP10.83□□□□□ -0.68
PSMB3-212ENST00000620309 PTPRKQ15262 1439 aa10.82□□□□□ -0.68
PSMB3-212ENST00000620309 ZNF644Q9H582 1327 aaPredicted RBP10.82□□□□□ -0.68
PSMB3-212ENST00000620309 PLA2R1Q13018 1463 aa10.81□□□□□ -0.68
PSMB3-212ENST00000620309 EIF2AK4Q9P2K8 1649 aaKnown RBP10.81□□□□□ -0.68
PSMB3-212ENST00000620309 UBAP1LF5GYI3 381 aa10.81□□□□□ -0.68
PSMB3-212ENST00000620309 RSPH4AQ5TD94 716 aa10.81□□□□□ -0.68
PSMB3-212ENST00000620309 NPATQ14207 1427 aa10.81□□□□□ -0.68
PSMB3-212ENST00000620309 SPAG9O60271 1321 aaKnown RBP10.8□□□□□ -0.68
PSMB3-212ENST00000620309 ALKQ9UM73 1620 aa10.8□□□□□ -0.68
PSMB3-212ENST00000620309 CNTLNQ9NXG0 1405 aa10.79□□□□□ -0.68
PSMB3-212ENST00000620309 DEPDC5O75140 1603 aa10.79□□□□□ -0.68
PSMB3-212ENST00000620309 MYO3AQ8NEV4 1616 aa10.79□□□□□ -0.68
PSMB3-212ENST00000620309 HSPA1LP34931 641 aa10.78□□□□□ -0.68
PSMB3-212ENST00000620309 RTEL1-TNFRSF6BF6WH68 1400 aa10.77□□□□□ -0.68
PSMB3-212ENST00000620309 AFAP1Q8N556 730 aa10.77□□□□□ -0.69
PSMB3-212ENST00000620309 UNC13BO14795 1591 aa10.77□□□□□ -0.69
PSMB3-212ENST00000620309 ROCK1Q13464 1354 aa10.77□□□□□ -0.69
PSMB3-212ENST00000620309 RNF17Q9BXT8 1623 aaKnown RBP10.76□□□□□ -0.69
PSMB3-212ENST00000620309 HFM1A2PYH4 1435 aa10.76□□□□□ -0.69
PSMB3-212ENST00000620309 TSPY4P0CV99 314 aa10.76□□□□□ -0.69
PSMB3-212ENST00000620309 TSPY10P0CW01 314 aa10.76□□□□□ -0.69
PSMB3-212ENST00000620309 HNRNPMP52272 730 aaKnown RBP eCLIP10.76□□□□□ -0.69
PSMB3-212ENST00000620309 CEP170BQ9Y4F5 1589 aaPredicted RBP10.76□□□□□ -0.69
PSMB3-212ENST00000620309 NCKAP5LQ9HCH0 1330 aa10.76□□□□□ -0.69
PSMB3-212ENST00000620309 A2MP01023 1474 aa10.75□□□□□ -0.69
PSMB3-212ENST00000620309 DUOX2Q9NRD8 1548 aa10.75□□□□□ -0.69
PSMB3-212ENST00000620309 TRIM26Q12899 539 aaPredicted RBP10.75□□□□□ -0.69
PSMB3-212ENST00000620309 FAM50AQ14320 339 aaKnown RBP10.75□□□□□ -0.69
PSMB3-212ENST00000620309 MROH1Q8NDA8 1641 aa10.75□□□□□ -0.69
PSMB3-212ENST00000620309 ZC3H13Q5T200 1668 aaKnown RBP10.75□□□□□ -0.69
PSMB3-212ENST00000620309 ESF1Q9H501 851 aaKnown RBP10.74□□□□□ -0.69
PSMB3-212ENST00000620309 CPS1P31327 1500 aa10.74□□□□□ -0.69
PSMB3-212ENST00000620309 FAM135AQ9P2D6 1515 aa10.74□□□□□ -0.69
PSMB3-212ENST00000620309 NEURL4Q96JN8 1562 aa10.73□□□□□ -0.69
PSMB3-212ENST00000620309 PKD2Q13563 968 aa10.73□□□□□ -0.69
PSMB3-212ENST00000620309 NAIPQ13075 1403 aa10.73□□□□□ -0.69
PSMB3-212ENST00000620309 PRDM15P57071 1507 aaPredicted RBP10.73□□□□□ -0.69
PSMB3-212ENST00000620309 CLTCQ00610 1675 aaKnown RBP10.73□□□□□ -0.69
PSMB3-212ENST00000620309 POLR1AO95602 1720 aaPredicted RBP10.72□□□□□ -0.69
PSMB3-212ENST00000620309 ERBINQ96RT1 1412 aa10.72□□□□□ -0.69
PSMB3-212ENST00000620309 ZMYM3Q14202 1370 aa10.71□□□□□ -0.69
PSMB3-212ENST00000620309 KDM5DQ9BY66 1539 aa10.71□□□□□ -0.69
PSMB3-212ENST00000620309 IQGAP3Q86VI3 1631 aa10.7□□□□□ -0.7
PSMB3-212ENST00000620309 KIF15Q9NS87 1388 aa10.7□□□□□ -0.7
PSMB3-212ENST00000620309 CEP152O94986 1710 aa10.7□□□□□ -0.7
PSMB3-212ENST00000620309 VWDEQ8N2E2 1590 aa10.69□□□□□ -0.7
PSMB3-212ENST00000620309 ANKRD30AQ9BXX3 1397 aa10.69□□□□□ -0.7
PSMB3-212ENST00000620309 RGS17Q9UGC6 210 aaPredicted RBP10.69□□□□□ -0.7
PSMB3-212ENST00000620309 TOM1O60784 492 aa10.67□□□□□ -0.7
PSMB3-212ENST00000620309 PPP6R1Q9UPN7 881 aa10.67□□□□□ -0.7
PSMB3-212ENST00000620309 ANKRD50Q9ULJ7 1429 aa10.67□□□□□ -0.7
PSMB3-212ENST00000620309 DHX29Q7Z478 1369 aaKnown RBP10.66□□□□□ -0.7
PSMB3-212ENST00000620309 PIP4K2BP78356 416 aa10.66□□□□□ -0.7
PSMB3-212ENST00000620309 STRCP1A6NGW2 1772 aa10.66□□□□□ -0.7
PSMB3-212ENST00000620309 A2ML1A8K2U0 1454 aa10.66□□□□□ -0.7
PSMB3-212ENST00000620309 TET3O43151 1660 aa10.66□□□□□ -0.7
PSMB3-212ENST00000620309 ITGAEP38570 1179 aa10.65□□□□□ -0.7
PSMB3-212ENST00000620309 PHF23Q9BUL5 403 aaPredicted RBP10.65□□□□□ -0.7
PSMB3-212ENST00000620309 SETD5Q9C0A6 1442 aa10.65□□□□□ -0.7
PSMB3-212ENST00000620309 RAB3GAP2Q9H2M9 1393 aa10.65□□□□□ -0.71
PSMB3-212ENST00000620309 PCGF6Q9BYE7 350 aa10.63□□□□□ -0.71
PSMB3-212ENST00000620309 EFCAB6Q5THR3 1501 aa10.63□□□□□ -0.71
PSMB3-212ENST00000620309 E9PCH4 1651 aa10.63□□□□□ -0.71
PSMB3-212ENST00000620309 MED14O60244 1454 aa10.62□□□□□ -0.71
PSMB3-212ENST00000620309 CHIC2Q9UKJ5 165 aa10.62□□□□□ -0.71
PSMB3-212ENST00000620309 LMTK2Q8IWU2 1503 aa10.62□□□□□ -0.71
PSMB3-212ENST00000620309 KANK1Q14678 1352 aa10.62□□□□□ -0.71
PSMB3-212ENST00000620309 PZPP20742 1482 aa10.61□□□□□ -0.71
PSMB3-212ENST00000620309 SPHKAPQ2M3C7 1700 aa10.61□□□□□ -0.71
PSMB3-212ENST00000620309 SCAF1Q9H7N4 1312 aaKnown RBP10.61□□□□□ -0.71
PSMB3-212ENST00000620309 SYNMO15061 1565 aa10.61□□□□□ -0.71
PSMB3-212ENST00000620309 KIF3BO15066 747 aa10.61□□□□□ -0.71
PSMB3-212ENST00000620309 GGT6Q6P531 493 aa10.61□□□□□ -0.71
PSMB3-212ENST00000620309 ABCC3O15438 1527 aa10.61□□□□□ -0.71
PSMB3-212ENST00000620309 RRP7BPQ9NSQ0 103 aa10.6□□□□□ -0.71
PSMB3-212ENST00000620309 LRRC7Q96NW7 1537 aa10.59□□□□□ -0.71
PSMB3-212ENST00000620309 XIRP1Q702N8 1843 aaKnown RBP10.59□□□□□ -0.71
PSMB3-212ENST00000620309 SETD1AO15047 1707 aaKnown RBP10.58□□□□□ -0.72
PSMB3-212ENST00000620309 IQGAP1P46940 1657 aa10.58□□□□□ -0.72
PSMB3-212ENST00000620309 WASHC2CQ9Y4E1 1318 aa10.58□□□□□ -0.72
PSMB3-212ENST00000620309 SRCAPQ6ZRS2 3230 aa10.57□□□□□ -0.72
PSMB3-212ENST00000620309 CFAP65Q6ZU64 1925 aaKnown RBP10.57□□□□□ -0.72
PSMB3-212ENST00000620309 POTEAQ6S8J7 498 aa10.56□□□□□ -0.72
PSMB3-212ENST00000620309 NPHP4O75161 1426 aaPredicted RBP10.54□□□□□ -0.72
PSMB3-212ENST00000620309 PIK3C2BO00750 1634 aa10.54□□□□□ -0.72
PSMB3-212ENST00000620309 TRPM2O94759 1503 aa10.53□□□□□ -0.72
PSMB3-212ENST00000620309 DHX57Q6P158 1386 aaKnown RBP10.53□□□□□ -0.72
PSMB3-212ENST00000620309 HRCP23327 699 aa10.53□□□□□ -0.72
PSMB3-212ENST00000620309 TNRQ92752 1358 aa10.52□□□□□ -0.72
PSMB3-212ENST00000620309 RPRD2Q5VT52 1461 aaKnown RBP10.52□□□□□ -0.73
PSMB3-212ENST00000620309 KDM5AP29375 1690 aaKnown RBP10.52□□□□□ -0.73
PSMB3-212ENST00000620309 NLRP1Q9C000 1473 aa10.51□□□□□ -0.73
PSMB3-212ENST00000620309 ACIN1Q9UKV3 1341 aaKnown RBP10.51□□□□□ -0.73
PSMB3-212ENST00000620309 UGGT1Q9NYU2 1555 aa10.51□□□□□ -0.73
PSMB3-212ENST00000620309 CLTCL1P53675 1640 aa10.51□□□□□ -0.73
PSMB3-212ENST00000620309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.5□□□□□ -0.73
PSMB3-212ENST00000620309 IFT172Q9UG01 1749 aa10.5□□□□□ -0.73
PSMB3-212ENST00000620309 ARHGAP31Q2M1Z3 1444 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms