RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	RCAN3	Q9UKA8	241 aa		19.25	■□□□□ 0.67
SMTN-223	ENST00000619644	RNF123	Q5XPI4	1314 aa		19.25	■□□□□ 0.67
SMTN-223	ENST00000619644	IL27	Q8NEV9	243 aa		19.24	■□□□□ 0.67
SMTN-223	ENST00000619644	CDCA7L	Q96GN5	454 aa		19.24	■□□□□ 0.67
SMTN-223	ENST00000619644	KDM5C	P41229	1560 aa		19.23	■□□□□ 0.67
SMTN-223	ENST00000619644	CEP170	Q5SW79	1584 aa		19.23	■□□□□ 0.67
SMTN-223	ENST00000619644	ADGB	Q8N7X0	1667 aa		19.23	■□□□□ 0.67
SMTN-223	ENST00000619644	PLIN1	O60240	522 aa		19.23	■□□□□ 0.67
SMTN-223	ENST00000619644	RRP1	P56182	461 aa	Known RBP	19.23	■□□□□ 0.67
SMTN-223	ENST00000619644	ADGRL2	O95490	1459 aa		19.22	■□□□□ 0.67
SMTN-223	ENST00000619644	KTN1	Q86UP2	1357 aa	Known RBP	19.22	■□□□□ 0.67
SMTN-223	ENST00000619644	MAGI1	Q96QZ7	1491 aa	Predicted RBP	19.22	■□□□□ 0.67
SMTN-223	ENST00000619644	SYNJ2	O15056	1496 aa		19.22	■□□□□ 0.67
SMTN-223	ENST00000619644	NLRP13	Q86W25	1043 aa		19.21	■□□□□ 0.67
SMTN-223	ENST00000619644	POLR1A	O95602	1720 aa	Predicted RBP	19.21	■□□□□ 0.67
SMTN-223	ENST00000619644	RALGAPB	Q86X10	1494 aa		19.21	■□□□□ 0.67
SMTN-223	ENST00000619644	ATP10B	O94823	1461 aa		19.21	■□□□□ 0.67
SMTN-223	ENST00000619644	CCDC144A	A2RUR9	1427 aa		19.2	■□□□□ 0.66
SMTN-223	ENST00000619644	BRD4	O60885	1362 aa	Predicted RBP	19.2	■□□□□ 0.66
SMTN-223	ENST00000619644	PANK3	Q9H999	370 aa		19.18	■□□□□ 0.66
SMTN-223	ENST00000619644	RTN4	Q9NQC3	1192 aa	Known RBP	19.18	■□□□□ 0.66
SMTN-223	ENST00000619644	UHRF1BP1	Q6BDS2	1440 aa		19.16	■□□□□ 0.66
SMTN-223	ENST00000619644	PTPRG	P23470	1445 aa		19.15	■□□□□ 0.66
SMTN-223	ENST00000619644	SKAP1	Q86WV1	359 aa		19.15	■□□□□ 0.66
SMTN-223	ENST00000619644	CROCC2	H7BZ55	1655 aa		19.12	■□□□□ 0.65
SMTN-223	ENST00000619644	LAS1L	Q9Y4W2	734 aa	Known RBP	19.12	■□□□□ 0.65
SMTN-223	ENST00000619644	CDC42BPA	Q5VT25	1732 aa		19.12	■□□□□ 0.65
SMTN-223	ENST00000619644	LRPPRC	P42704	1394 aa	Known RBP	19.11	■□□□□ 0.65
SMTN-223	ENST00000619644	NEFM	P07197	916 aa		19.11	■□□□□ 0.65
SMTN-223	ENST00000619644	ABCC10	Q5T3U5	1492 aa		19.1	■□□□□ 0.65
SMTN-223	ENST00000619644	TMF1	P82094	1093 aa		19.1	■□□□□ 0.65
SMTN-223	ENST00000619644	DISP3	Q9P2K9	1392 aa		19.09	■□□□□ 0.65
SMTN-223	ENST00000619644	ARHGEF12	Q9NZN5	1544 aa		19.08	■□□□□ 0.64
SMTN-223	ENST00000619644	FAM135A	Q9P2D6	1515 aa		19.08	■□□□□ 0.64
SMTN-223	ENST00000619644	ADCY10	Q96PN6	1610 aa		19.07	■□□□□ 0.64
SMTN-223	ENST00000619644	CCDC141	Q6ZP82	1450 aa		19.07	■□□□□ 0.64
SMTN-223	ENST00000619644	PER1	O15534	1290 aa	Predicted RBP	19.07	■□□□□ 0.64
SMTN-223	ENST00000619644	PDE4A	P27815	886 aa		19.07	■□□□□ 0.64
SMTN-223	ENST00000619644	CRBN	Q96SW2	442 aa		19.06	■□□□□ 0.64
SMTN-223	ENST00000619644	NUP160	Q12769	1436 aa		19.06	■□□□□ 0.64
SMTN-223	ENST00000619644	USP35	Q9P2H5	1018 aa		19.06	■□□□□ 0.64
SMTN-223	ENST00000619644	PRAG1	Q86YV5	1406 aa		19.06	■□□□□ 0.64
SMTN-223	ENST00000619644	SHANK2	Q9UPX8	1470 aa		19.06	■□□□□ 0.64
SMTN-223	ENST00000619644	WDR43	Q15061	677 aa	Known RBP eCLIP	19.06	■□□□□ 0.64
SMTN-223	ENST00000619644	KNSTRN	Q9Y448	316 aa		19.05	■□□□□ 0.64
SMTN-223	ENST00000619644	PDE3B	Q13370	1112 aa		19.05	■□□□□ 0.64
SMTN-223	ENST00000619644	TCERG1	O14776	1098 aa	Known RBP	19.04	■□□□□ 0.64
SMTN-223	ENST00000619644	ARHGAP5	Q13017	1502 aa		19.04	■□□□□ 0.64
SMTN-223	ENST00000619644	RSPH4A	Q5TD94	716 aa		19.04	■□□□□ 0.64
SMTN-223	ENST00000619644	ADAMTS8	Q9UP79	889 aa		19.04	■□□□□ 0.64
SMTN-223	ENST00000619644	PARD3	Q8TEW0	1356 aa		19.04	■□□□□ 0.64
SMTN-223	ENST00000619644	TESK2	Q96S53	571 aa		19.03	■□□□□ 0.64
SMTN-223	ENST00000619644	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	19.02	■□□□□ 0.64
SMTN-223	ENST00000619644	ABCA8	O94911	1581 aa		19.02	■□□□□ 0.64
SMTN-223	ENST00000619644	PLEKHH2	Q8IVE3	1493 aa		19.01	■□□□□ 0.63
SMTN-223	ENST00000619644	SYCP2	Q9BX26	1530 aa		19.01	■□□□□ 0.63
SMTN-223	ENST00000619644	WASHC2C	Q9Y4E1	1318 aa		19.01	■□□□□ 0.63
SMTN-223	ENST00000619644	C20orf194	Q5TEA3	1177 aa		19	■□□□□ 0.63
SMTN-223	ENST00000619644	BACH2	Q9BYV9	841 aa		19	■□□□□ 0.63
SMTN-223	ENST00000619644	ERBIN	Q96RT1	1412 aa		18.99	■□□□□ 0.63
SMTN-223	ENST00000619644	PPM1G	O15355	546 aa	Predicted RBP	18.99	■□□□□ 0.63
SMTN-223	ENST00000619644	CCDC146	Q8IYE0	955 aa		18.99	■□□□□ 0.63
SMTN-223	ENST00000619644	A2M	P01023	1474 aa		18.98	■□□□□ 0.63
SMTN-223	ENST00000619644	KDM5D	Q9BY66	1539 aa		18.98	■□□□□ 0.63
SMTN-223	ENST00000619644	SAMD9L	Q8IVG5	1584 aa		18.98	■□□□□ 0.63
SMTN-223	ENST00000619644	PLA2R1	Q13018	1463 aa		18.95	■□□□□ 0.62
SMTN-223	ENST00000619644	MS4A1	P11836	297 aa		18.95	■□□□□ 0.62
SMTN-223	ENST00000619644	DAXX	Q9UER7	740 aa	Predicted RBP	18.93	■□□□□ 0.62
SMTN-223	ENST00000619644	PPP2R1A	P30153	589 aa		18.92	■□□□□ 0.62
SMTN-223	ENST00000619644	SLC4A3	P48751	1232 aa		18.92	■□□□□ 0.62
SMTN-223	ENST00000619644	RGS3	P49796	1198 aa		18.92	■□□□□ 0.62
SMTN-223	ENST00000619644	COL17A1	Q9UMD9	1497 aa	Predicted RBP	18.92	■□□□□ 0.62
SMTN-223	ENST00000619644	AFAP1	Q8N556	730 aa		18.92	■□□□□ 0.62
SMTN-223	ENST00000619644	BRPF3	Q9ULD4	1205 aa		18.92	■□□□□ 0.62
SMTN-223	ENST00000619644	ARHGEF5	Q12774	1597 aa		18.91	■□□□□ 0.62
SMTN-223	ENST00000619644	TRPM1	Q7Z4N2	1603 aa		18.91	■□□□□ 0.62
SMTN-223	ENST00000619644	EFCAB2	Q5VUJ9	269 aa		18.91	■□□□□ 0.62
SMTN-223	ENST00000619644	CDC42BPB	Q9Y5S2	1711 aa		18.9	■□□□□ 0.62
SMTN-223	ENST00000619644	GOLGA2	Q08379	1002 aa		18.88	■□□□□ 0.61
SMTN-223	ENST00000619644	CHGA	P10645	457 aa	Known RBP	18.88	■□□□□ 0.61
SMTN-223	ENST00000619644	TNNT2	P45379	298 aa	Predicted RBP	18.87	■□□□□ 0.61
SMTN-223	ENST00000619644	GSE1	Q14687	1217 aa		18.87	■□□□□ 0.61
SMTN-223	ENST00000619644	GPRASP1	Q5JY77	1395 aa		18.87	■□□□□ 0.61
SMTN-223	ENST00000619644	DDRGK1	Q96HY6	314 aa		18.87	■□□□□ 0.61
SMTN-223	ENST00000619644	SPAG9	O60271	1321 aa	Known RBP	18.87	■□□□□ 0.61
SMTN-223	ENST00000619644	TTC37	Q6PGP7	1564 aa		18.86	■□□□□ 0.61
SMTN-223	ENST00000619644		E9PCH4	1651 aa		18.86	■□□□□ 0.61
SMTN-223	ENST00000619644	NEUROD2	Q15784	382 aa		18.86	■□□□□ 0.61
SMTN-223	ENST00000619644	APAF1	O14727	1248 aa		18.85	■□□□□ 0.61
SMTN-223	ENST00000619644	PREX2	Q70Z35	1606 aa		18.85	■□□□□ 0.61
SMTN-223	ENST00000619644	PLEKHH1	Q9ULM0	1364 aa		18.85	■□□□□ 0.61
SMTN-223	ENST00000619644	CDCA8	Q53HL2	280 aa		18.85	■□□□□ 0.61
SMTN-223	ENST00000619644	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.84	■□□□□ 0.61
SMTN-223	ENST00000619644	SENP3	Q9H4L4	574 aa	Predicted RBP	18.84	■□□□□ 0.61
SMTN-223	ENST00000619644	NFKBIB	Q15653	356 aa		18.83	■□□□□ 0.61
SMTN-223	ENST00000619644	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	18.83	■□□□□ 0.61
SMTN-223	ENST00000619644	CANX	P27824	592 aa	Known RBP	18.83	■□□□□ 0.61
SMTN-223	ENST00000619644	DUSP27	Q5VZP5	1158 aa		18.83	■□□□□ 0.61
SMTN-223	ENST00000619644	KIF3B	O15066	747 aa		18.83	■□□□□ 0.6
SMTN-223	ENST00000619644	AMER1	Q5JTC6	1135 aa	Predicted RBP	18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms