RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 IFT140Q96RY7 1462 aa20.71■□□□□ 0.91
GPN1-212ENST00000616939 NLRP13Q86W25 1043 aa20.71■□□□□ 0.91
GPN1-212ENST00000616939 CARD11Q9BXL7 1154 aa20.71■□□□□ 0.91
GPN1-212ENST00000616939 ARHGEF5Q12774 1597 aa20.71■□□□□ 0.91
GPN1-212ENST00000616939 WASHC2CQ9Y4E1 1318 aa20.69■□□□□ 0.9
GPN1-212ENST00000616939 POLR3GLQ9BT43 218 aa20.69■□□□□ 0.9
GPN1-212ENST00000616939 GRIN2AQ12879 1464 aa20.68■□□□□ 0.9
GPN1-212ENST00000616939 EIF4G3O43432 1585 aaKnown RBP20.68■□□□□ 0.9
GPN1-212ENST00000616939 DDRGK1Q96HY6 314 aa20.67■□□□□ 0.9
GPN1-212ENST00000616939 C9orf84Q5VXU9 1444 aa20.66■□□□□ 0.9
GPN1-212ENST00000616939 ZNF326Q5BKZ1 582 aaKnown RBP20.66■□□□□ 0.9
GPN1-212ENST00000616939 ABCC10Q5T3U5 1492 aa20.65■□□□□ 0.9
GPN1-212ENST00000616939 ARID3CA6NKF2 412 aa20.64■□□□□ 0.9
GPN1-212ENST00000616939 COL17A1Q9UMD9 1497 aaPredicted RBP20.64■□□□□ 0.89
GPN1-212ENST00000616939 GPRASP1Q5JY77 1395 aa20.64■□□□□ 0.89
GPN1-212ENST00000616939 ZNF608Q9ULD9 1512 aaPredicted RBP20.64■□□□□ 0.89
GPN1-212ENST00000616939 NUP155O75694 1391 aa20.63■□□□□ 0.89
GPN1-212ENST00000616939 ST20-MTHFSA0A0A6YYL1 179 aa20.63■□□□□ 0.89
GPN1-212ENST00000616939 PRDM15P57071 1507 aaPredicted RBP20.62■□□□□ 0.89
GPN1-212ENST00000616939 EIF2AK4Q9P2K8 1649 aaKnown RBP20.62■□□□□ 0.89
GPN1-212ENST00000616939 PRAG1Q86YV5 1406 aa20.62■□□□□ 0.89
GPN1-212ENST00000616939 NEFMP07197 916 aa20.6■□□□□ 0.89
GPN1-212ENST00000616939 ABCA8O94911 1581 aa20.59■□□□□ 0.89
GPN1-212ENST00000616939 NPM2Q86SE8 214 aaKnown RBP20.58■□□□□ 0.89
GPN1-212ENST00000616939 UNC13BO14795 1591 aa20.58■□□□□ 0.89
GPN1-212ENST00000616939 PLB1Q6P1J6 1458 aa20.57■□□□□ 0.88
GPN1-212ENST00000616939 CNGB1Q14028 1251 aaPredicted RBP20.57■□□□□ 0.88
GPN1-212ENST00000616939 MYO5CQ9NQX4 1742 aa20.57■□□□□ 0.88
GPN1-212ENST00000616939 FAM135AQ9P2D6 1515 aa20.57■□□□□ 0.88
GPN1-212ENST00000616939 CLASP1Q7Z460 1538 aa20.55■□□□□ 0.88
GPN1-212ENST00000616939 PER1O15534 1290 aaPredicted RBP20.55■□□□□ 0.88
GPN1-212ENST00000616939 MAGI1Q96QZ7 1491 aaPredicted RBP20.55■□□□□ 0.88
GPN1-212ENST00000616939 RNF17Q9BXT8 1623 aaKnown RBP20.54■□□□□ 0.88
GPN1-212ENST00000616939 MAST1Q9Y2H9 1570 aa20.54■□□□□ 0.88
GPN1-212ENST00000616939 NUP160Q12769 1436 aa20.53■□□□□ 0.88
GPN1-212ENST00000616939 LAS1LQ9Y4W2 734 aaKnown RBP20.53■□□□□ 0.88
GPN1-212ENST00000616939 VIRMAQ69YN4 1812 aaKnown RBP20.52■□□□□ 0.88
GPN1-212ENST00000616939 SYNJ2O15056 1496 aa20.52■□□□□ 0.88
GPN1-212ENST00000616939 CARMIL2Q6F5E8 1435 aa20.52■□□□□ 0.87
GPN1-212ENST00000616939 KDM2BQ8NHM5 1336 aa20.51■□□□□ 0.87
GPN1-212ENST00000616939 PRKCSHP14314 528 aaPredicted RBP20.5■□□□□ 0.87
GPN1-212ENST00000616939 IL27Q8NEV9 243 aa20.5■□□□□ 0.87
GPN1-212ENST00000616939 DCAF11Q8TEB1 546 aa20.5■□□□□ 0.87
GPN1-212ENST00000616939 PREX2Q70Z35 1606 aa20.5■□□□□ 0.87
GPN1-212ENST00000616939 CRBNQ96SW2 442 aa20.49■□□□□ 0.87
GPN1-212ENST00000616939 ZNF777Q9ULD5 760 aaPredicted RBP20.49■□□□□ 0.87
GPN1-212ENST00000616939 IQGAP3Q86VI3 1631 aa20.48■□□□□ 0.87
GPN1-212ENST00000616939 CCDC141Q6ZP82 1450 aa20.48■□□□□ 0.87
GPN1-212ENST00000616939 A2MP01023 1474 aa20.48■□□□□ 0.87
GPN1-212ENST00000616939 CCDC144AA2RUR9 1427 aa20.47■□□□□ 0.87
GPN1-212ENST00000616939 SENP3-EIF4A1A0A087X0R7 540 aa20.47■□□□□ 0.87
GPN1-212ENST00000616939 CDCA7LQ96GN5 454 aa20.47■□□□□ 0.87
GPN1-212ENST00000616939 ERBINQ96RT1 1412 aa20.47■□□□□ 0.87
GPN1-212ENST00000616939 CENPQQ7L2Z9 268 aaPredicted RBP20.46■□□□□ 0.87
GPN1-212ENST00000616939 SAMD9LQ8IVG5 1584 aa20.46■□□□□ 0.87
GPN1-212ENST00000616939 KDM2AQ9Y2K7 1162 aa20.46■□□□□ 0.87
GPN1-212ENST00000616939 TSPY4P0CV99 314 aa20.45■□□□□ 0.86
GPN1-212ENST00000616939 TSPY10P0CW01 314 aa20.45■□□□□ 0.86
GPN1-212ENST00000616939 CDC42BPBQ9Y5S2 1711 aa20.45■□□□□ 0.86
GPN1-212ENST00000616939 ATP10AO60312 1499 aa20.44■□□□□ 0.86
GPN1-212ENST00000616939 PLXNC1O60486 1568 aa20.43■□□□□ 0.86
GPN1-212ENST00000616939 ATP10BO94823 1461 aa20.43■□□□□ 0.86
GPN1-212ENST00000616939 GSE1Q14687 1217 aa20.43■□□□□ 0.86
GPN1-212ENST00000616939 ANO8Q9HCE9 1232 aaPredicted RBP20.43■□□□□ 0.86
GPN1-212ENST00000616939 TESK2Q96S53 571 aa20.42■□□□□ 0.86
GPN1-212ENST00000616939 DISP3Q9P2K9 1392 aa20.42■□□□□ 0.86
GPN1-212ENST00000616939 IQGAP1P46940 1657 aa20.42■□□□□ 0.86
GPN1-212ENST00000616939 PLA2R1Q13018 1463 aa20.41■□□□□ 0.86
GPN1-212ENST00000616939 PLEKHD1A6NEE1 506 aa20.41■□□□□ 0.86
GPN1-212ENST00000616939 SALL2Q9Y467 1007 aaPredicted RBP20.41■□□□□ 0.86
GPN1-212ENST00000616939 EIF3AQ14152 1382 aaKnown RBP20.41■□□□□ 0.86
GPN1-212ENST00000616939 NFKBIBQ15653 356 aa20.4■□□□□ 0.86
GPN1-212ENST00000616939 RSPH4AQ5TD94 716 aa20.4■□□□□ 0.86
GPN1-212ENST00000616939 SYNMO15061 1565 aa20.4■□□□□ 0.86
GPN1-212ENST00000616939 FAM161AQ3B820 660 aa20.39■□□□□ 0.86
GPN1-212ENST00000616939 MAGI2Q86UL8 1455 aa20.39■□□□□ 0.85
GPN1-212ENST00000616939 PLIN1O60240 522 aa20.38■□□□□ 0.85
GPN1-212ENST00000616939 ZNF521Q96K83 1311 aa20.37■□□□□ 0.85
GPN1-212ENST00000616939 ABCC2Q92887 1545 aa20.36■□□□□ 0.85
GPN1-212ENST00000616939 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.36■□□□□ 0.85
GPN1-212ENST00000616939 TMF1P82094 1093 aa20.35■□□□□ 0.85
GPN1-212ENST00000616939 PIK3C2GO75747 1445 aa20.35■□□□□ 0.85
GPN1-212ENST00000616939 WDR7Q9Y4E6 1490 aa20.35■□□□□ 0.85
GPN1-212ENST00000616939 C8orf34Q49A92 452 aa20.34■□□□□ 0.85
GPN1-212ENST00000616939 PANK3Q9H999 370 aa20.34■□□□□ 0.85
GPN1-212ENST00000616939 NBPF1Q3BBV0 1214 aa20.33■□□□□ 0.85
GPN1-212ENST00000616939 DUSP27Q5VZP5 1158 aa20.33■□□□□ 0.85
GPN1-212ENST00000616939 MADDQ8WXG6 1647 aa20.33■□□□□ 0.84
GPN1-212ENST00000616939 DAXXQ9UER7 740 aaPredicted RBP20.32■□□□□ 0.84
GPN1-212ENST00000616939 CC2D1BQ5T0F9 858 aaKnown RBP20.32■□□□□ 0.84
GPN1-212ENST00000616939 NPC1L1Q9UHC9 1359 aa20.32■□□□□ 0.84
GPN1-212ENST00000616939 PLEKHH1Q9ULM0 1364 aa20.32■□□□□ 0.84
GPN1-212ENST00000616939 C20orf194Q5TEA3 1177 aa20.3■□□□□ 0.84
GPN1-212ENST00000616939 SPHKAPQ2M3C7 1700 aa20.3■□□□□ 0.84
GPN1-212ENST00000616939 MYOM1P52179 1685 aa20.3■□□□□ 0.84
GPN1-212ENST00000616939 ASXL1Q8IXJ9 1541 aa20.29■□□□□ 0.84
GPN1-212ENST00000616939 DUOX2Q9NRD8 1548 aa20.29■□□□□ 0.84
GPN1-212ENST00000616939 DNAJC5BQ9UF47 199 aa20.28■□□□□ 0.84
GPN1-212ENST00000616939 SYCP2Q9BX26 1530 aa20.28■□□□□ 0.84
GPN1-212ENST00000616939 TRMT2AQ8IZ69 625 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms