RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 RTEL1-TNFRSF6BF6WH68 1400 aa27.88■■■□□ 2.05
CSNK1E-215ENST00000612795 MBD5Q9P267 1494 aa27.88■■■□□ 2.05
CSNK1E-215ENST00000612795 ZNF644Q9H582 1327 aaPredicted RBP27.88■■■□□ 2.05
CSNK1E-215ENST00000612795 FAM135AQ9P2D6 1515 aa27.87■■■□□ 2.05
CSNK1E-215ENST00000612795 TNRQ92752 1358 aa27.86■■■□□ 2.05
CSNK1E-215ENST00000612795 PIP4K2BP78356 416 aa27.85■■■□□ 2.05
CSNK1E-215ENST00000612795 DHX29Q7Z478 1369 aaKnown RBP27.85■■■□□ 2.05
CSNK1E-215ENST00000612795 PZPP20742 1482 aa27.84■■■□□ 2.05
CSNK1E-215ENST00000612795 SHANK2Q9UPX8 1470 aa27.83■■■□□ 2.05
CSNK1E-215ENST00000612795 HSPA1LP34931 641 aa27.82■■■□□ 2.04
CSNK1E-215ENST00000612795 TOM1O60784 492 aa27.81■■■□□ 2.04
CSNK1E-215ENST00000612795 CCDC141Q6ZP82 1450 aa27.81■■■□□ 2.04
CSNK1E-215ENST00000612795 KIF3BO15066 747 aa27.8■■■□□ 2.04
CSNK1E-215ENST00000612795 CEP162Q5TB80 1403 aa27.79■■■□□ 2.04
CSNK1E-215ENST00000612795 FBXO31Q5XUX0 539 aaPredicted RBP27.79■■■□□ 2.04
CSNK1E-215ENST00000612795 VWDEQ8N2E2 1590 aa27.77■■■□□ 2.04
CSNK1E-215ENST00000612795 UGGT1Q9NYU2 1555 aa27.77■■■□□ 2.04
CSNK1E-215ENST00000612795 CAMSAP2Q08AD1 1489 aa27.76■■■□□ 2.04
CSNK1E-215ENST00000612795 DEPDC5O75140 1603 aa27.76■■■□□ 2.03
CSNK1E-215ENST00000612795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.75■■■□□ 2.03
CSNK1E-215ENST00000612795 IQGAP1P46940 1657 aa27.75■■■□□ 2.03
CSNK1E-215ENST00000612795 NLRP1Q9C000 1473 aa27.75■■■□□ 2.03
CSNK1E-215ENST00000612795 WASHC2CQ9Y4E1 1318 aa27.74■■■□□ 2.03
CSNK1E-215ENST00000612795 ANKLE2Q86XL3 938 aa27.74■■■□□ 2.03
CSNK1E-215ENST00000612795 NPHP4O75161 1426 aaPredicted RBP27.71■■■□□ 2.03
CSNK1E-215ENST00000612795 THEMISQ8N1K5 641 aaPredicted RBP27.7■■■□□ 2.02
CSNK1E-215ENST00000612795 ZC3H13Q5T200 1668 aaKnown RBP27.7■■■□□ 2.02
CSNK1E-215ENST00000612795 MED14O60244 1454 aa27.7■■■□□ 2.02
CSNK1E-215ENST00000612795 MIA2Q96PC5 1412 aa27.69■■■□□ 2.02
CSNK1E-215ENST00000612795 NCOA2Q15596 1464 aa27.69■■■□□ 2.02
CSNK1E-215ENST00000612795 ARHGEF5Q12774 1597 aa27.68■■■□□ 2.02
CSNK1E-215ENST00000612795 RNF17Q9BXT8 1623 aaKnown RBP27.67■■■□□ 2.02
CSNK1E-215ENST00000612795 ALKQ9UM73 1620 aa27.67■■■□□ 2.02
CSNK1E-215ENST00000612795 STRCP1A6NGW2 1772 aa27.66■■■□□ 2.02
CSNK1E-215ENST00000612795 SYNMO15061 1565 aa27.66■■■□□ 2.02
CSNK1E-215ENST00000612795 PHF23Q9BUL5 403 aaPredicted RBP27.66■■■□□ 2.02
CSNK1E-215ENST00000612795 RSPH4AQ5TD94 716 aa27.65■■■□□ 2.02
CSNK1E-215ENST00000612795 CFAP65Q6ZU64 1925 aaKnown RBP27.61■■■□□ 2.01
CSNK1E-215ENST00000612795 ABCC3O15438 1527 aa27.6■■■□□ 2.01
CSNK1E-215ENST00000612795 EIF2AK4Q9P2K8 1649 aaKnown RBP27.59■■■□□ 2.01
CSNK1E-215ENST00000612795 CEP152O94986 1710 aa27.59■■■□□ 2.01
CSNK1E-215ENST00000612795 TSPY4P0CV99 314 aa27.58■■■□□ 2.01
CSNK1E-215ENST00000612795 TSPY10P0CW01 314 aa27.58■■■□□ 2.01
CSNK1E-215ENST00000612795 LRRC7Q96NW7 1537 aa27.57■■■□□ 2
CSNK1E-215ENST00000612795 UBR1Q8IWV7 1749 aa27.56■■■□□ 2
CSNK1E-215ENST00000612795 SENP3Q9H4L4 574 aaPredicted RBP27.56■■■□□ 2
CSNK1E-215ENST00000612795 MAST1Q9Y2H9 1570 aa27.56■■■□□ 2
CSNK1E-215ENST00000612795 ERVK-7P63135 1459 aa27.55■■■□□ 2
CSNK1E-215ENST00000612795 MROH1Q8NDA8 1641 aa27.51■■□□□ 1.99
CSNK1E-215ENST00000612795 SCAF11Q99590 1463 aaKnown RBP27.47■■□□□ 1.99
CSNK1E-215ENST00000612795 XIRP1Q702N8 1843 aaKnown RBP27.46■■□□□ 1.99
CSNK1E-215ENST00000612795 LRRC9Q6ZRR7 1453 aa27.42■■□□□ 1.98
CSNK1E-215ENST00000612795 DUOX2Q9NRD8 1548 aa27.41■■□□□ 1.98
CSNK1E-215ENST00000612795 SLIT1O75093 1534 aa27.4■■□□□ 1.98
CSNK1E-215ENST00000612795 ARHGAP23Q9P227 1491 aa27.38■■□□□ 1.97
CSNK1E-215ENST00000612795 PRDM15P57071 1507 aaPredicted RBP27.37■■□□□ 1.97
CSNK1E-215ENST00000612795 CROCC2H7BZ55 1655 aa27.36■■□□□ 1.97
CSNK1E-215ENST00000612795 PIK3C2BO00750 1634 aa27.36■■□□□ 1.97
CSNK1E-215ENST00000612795 TXNDC2Q86VQ3 553 aa27.34■■□□□ 1.97
CSNK1E-215ENST00000612795 MYOM3Q5VTT5 1437 aa27.33■■□□□ 1.96
CSNK1E-215ENST00000612795 VPS8Q8N3P4 1428 aa27.32■■□□□ 1.96
CSNK1E-215ENST00000612795 LTKP29376 864 aa27.31■■□□□ 1.96
CSNK1E-215ENST00000612795 EID1Q9Y6B2 187 aa27.31■■□□□ 1.96
CSNK1E-215ENST00000612795 ARHGAP31Q2M1Z3 1444 aa27.31■■□□□ 1.96
CSNK1E-215ENST00000612795 KDM5AP29375 1690 aaKnown RBP27.28■■□□□ 1.96
CSNK1E-215ENST00000612795 ERBINQ96RT1 1412 aa27.28■■□□□ 1.96
CSNK1E-215ENST00000612795 KIF15Q9NS87 1388 aa27.27■■□□□ 1.96
CSNK1E-215ENST00000612795 RGS17Q9UGC6 210 aaPredicted RBP27.26■■□□□ 1.95
CSNK1E-215ENST00000612795 ROBO1Q9Y6N7 1651 aa27.26■■□□□ 1.95
CSNK1E-215ENST00000612795 MAP3K1Q13233 1512 aa27.25■■□□□ 1.95
CSNK1E-215ENST00000612795 STAG3Q9UJ98 1225 aa27.24■■□□□ 1.95
CSNK1E-215ENST00000612795 EFCAB6Q5THR3 1501 aa27.24■■□□□ 1.95
CSNK1E-215ENST00000612795 TMEM2Q9UHN6 1383 aa27.23■■□□□ 1.95
CSNK1E-215ENST00000612795 FAM135BQ49AJ0 1406 aa27.23■■□□□ 1.95
CSNK1E-215ENST00000612795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.21■■□□□ 1.955e-9■■■□□ 16.3
CSNK1E-215ENST00000612795 PTPN23Q9H3S7 1636 aa27.2■■□□□ 1.95
CSNK1E-215ENST00000612795 KANK4Q5T7N3 995 aaPredicted RBP27.2■■□□□ 1.94
CSNK1E-215ENST00000612795 TMEM94Q12767 1356 aa27.2■■□□□ 1.94
CSNK1E-215ENST00000612795 KANK1Q14678 1352 aa27.2■■□□□ 1.94
CSNK1E-215ENST00000612795 RRP7BPQ9NSQ0 103 aa27.17■■□□□ 1.94
CSNK1E-215ENST00000612795 ABCC5O15440 1437 aa27.16■■□□□ 1.94
CSNK1E-215ENST00000612795 NWD1Q149M9 1564 aa27.14■■□□□ 1.94
CSNK1E-215ENST00000612795 ADGRB3O60242 1522 aa27.14■■□□□ 1.94
CSNK1E-215ENST00000612795 NKTRP30414 1462 aaKnown RBP27.13■■□□□ 1.93
CSNK1E-215ENST00000612795 PHLPP1O60346 1717 aa27.13■■□□□ 1.93
CSNK1E-215ENST00000612795 LMTK2Q8IWU2 1503 aa27.13■■□□□ 1.93
CSNK1E-215ENST00000612795 TET3O43151 1660 aa27.13■■□□□ 1.93
CSNK1E-215ENST00000612795 KCNA6P17658 529 aa27.12■■□□□ 1.93
CSNK1E-215ENST00000612795 DAPK1P53355 1430 aa27.12■■□□□ 1.93
CSNK1E-215ENST00000612795 SETD1AO15047 1707 aaKnown RBP27.12■■□□□ 1.93
CSNK1E-215ENST00000612795 PROSER2Q86WR7 435 aaPredicted RBP27.11■■□□□ 1.93
CSNK1E-215ENST00000612795 POTEAQ6S8J7 498 aa27.1■■□□□ 1.93
CSNK1E-215ENST00000612795 SLC26A8Q96RN1 970 aa27.1■■□□□ 1.93
CSNK1E-215ENST00000612795 IDI1Q13907 227 aa27.08■■□□□ 1.93
CSNK1E-215ENST00000612795 RBM33Q96EV2 1170 aaKnown RBP27.08■■□□□ 1.93
CSNK1E-215ENST00000612795 MYO5BQ9ULV0 1848 aa27.08■■□□□ 1.93
CSNK1E-215ENST00000612795 MSH6P52701 1360 aa27.07■■□□□ 1.92
CSNK1E-215ENST00000612795 BCANQ96GW7 911 aa27.05■■□□□ 1.92
CSNK1E-215ENST00000612795 ANKRD30AQ9BXX3 1397 aa27.04■■□□□ 1.92
CSNK1E-215ENST00000612795 CHD2O14647 1828 aaKnown RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms