RNA–Protein interactions for RNA: ENST00000601393.1

SNRPA-210, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-210ENST00000601393 KDM5DQ9BY66 1539 aa25.93■■□□□ 1.74
SNRPA-210ENST00000601393 NCOA1Q15788 1441 aa25.92■■□□□ 1.74
SNRPA-210ENST00000601393 ERBINQ96RT1 1412 aa25.92■■□□□ 1.74
SNRPA-210ENST00000601393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.92■■□□□ 1.74
SNRPA-210ENST00000601393 DEPDC5O75140 1603 aa25.92■■□□□ 1.74
SNRPA-210ENST00000601393 PTPRKQ15262 1439 aa25.91■■□□□ 1.74
SNRPA-210ENST00000601393 ZC3H13Q5T200 1668 aaKnown RBP25.91■■□□□ 1.74
SNRPA-210ENST00000601393 FAM50AQ14320 339 aaKnown RBP25.91■■□□□ 1.74
SNRPA-210ENST00000601393 PLPPR3Q6T4P5 718 aa25.9■■□□□ 1.74
SNRPA-210ENST00000601393 ESF1Q9H501 851 aaKnown RBP25.9■■□□□ 1.74
SNRPA-210ENST00000601393 ZMYM3Q14202 1370 aa25.9■■□□□ 1.74
SNRPA-210ENST00000601393 ANKRD30AQ9BXX3 1397 aa25.89■■□□□ 1.74
SNRPA-210ENST00000601393 NPATQ14207 1427 aa25.88■■□□□ 1.73
SNRPA-210ENST00000601393 RRBP1Q9P2E9 1410 aaKnown RBP25.88■■□□□ 1.73
SNRPA-210ENST00000601393 PRDM15P57071 1507 aaPredicted RBP25.88■■□□□ 1.73
SNRPA-210ENST00000601393 ABCC3O15438 1527 aa25.86■■□□□ 1.73
SNRPA-210ENST00000601393 CEP152O94986 1710 aa25.85■■□□□ 1.73
SNRPA-210ENST00000601393 RRP7BPQ9NSQ0 103 aa25.85■■□□□ 1.73
SNRPA-210ENST00000601393 CHIC2Q9UKJ5 165 aa25.84■■□□□ 1.73
SNRPA-210ENST00000601393 MYO3AQ8NEV4 1616 aa25.81■■□□□ 1.72
SNRPA-210ENST00000601393 PZPP20742 1482 aa25.81■■□□□ 1.72
SNRPA-210ENST00000601393 ZNF142P52746 1687 aaPredicted RBP25.8■■□□□ 1.72
SNRPA-210ENST00000601393 UHRF1BP1Q6BDS2 1440 aa25.8■■□□□ 1.72
SNRPA-210ENST00000601393 CAMSAP1Q5T5Y3 1602 aa25.8■■□□□ 1.72
SNRPA-210ENST00000601393 ROCK1Q13464 1354 aa25.8■■□□□ 1.72
SNRPA-210ENST00000601393 VWDEQ8N2E2 1590 aa25.79■■□□□ 1.72
SNRPA-210ENST00000601393 WASHC2CQ9Y4E1 1318 aa25.76■■□□□ 1.71
SNRPA-210ENST00000601393 ANKRD50Q9ULJ7 1429 aa25.73■■□□□ 1.71
SNRPA-210ENST00000601393 HSPA2P54652 639 aa25.73■■□□□ 1.71
SNRPA-210ENST00000601393 LMTK2Q8IWU2 1503 aa25.73■■□□□ 1.71
SNRPA-210ENST00000601393 STRCQ7RTU9 1775 aa25.72■■□□□ 1.71
SNRPA-210ENST00000601393 UNC13BO14795 1591 aa25.72■■□□□ 1.71
SNRPA-210ENST00000601393 SPATA31D1Q6ZQQ2 1576 aa25.72■■□□□ 1.71
SNRPA-210ENST00000601393 CEP170BQ9Y4F5 1589 aaPredicted RBP25.72■■□□□ 1.71
SNRPA-210ENST00000601393 ARHGAP31Q2M1Z3 1444 aa25.68■■□□□ 1.7
SNRPA-210ENST00000601393 ERVK-7P63135 1459 aa25.66■■□□□ 1.7
SNRPA-210ENST00000601393 FBXO31Q5XUX0 539 aaPredicted RBP25.66■■□□□ 1.7
SNRPA-210ENST00000601393 CFAP65Q6ZU64 1925 aaKnown RBP25.65■■□□□ 1.7
SNRPA-210ENST00000601393 GCC2Q8IWJ2 1684 aa25.65■■□□□ 1.7
SNRPA-210ENST00000601393 TNRQ92752 1358 aa25.65■■□□□ 1.7
SNRPA-210ENST00000601393 EFCAB6Q5THR3 1501 aa25.64■■□□□ 1.7
SNRPA-210ENST00000601393 A2ML1A8K2U0 1454 aa25.64■■□□□ 1.69
SNRPA-210ENST00000601393 ITGAEP38570 1179 aa25.63■■□□□ 1.69
SNRPA-210ENST00000601393 KANK1Q14678 1352 aa25.62■■□□□ 1.69
SNRPA-210ENST00000601393 TET3O43151 1660 aa25.61■■□□□ 1.69
SNRPA-210ENST00000601393 IQGAP3Q86VI3 1631 aa25.6■■□□□ 1.69
SNRPA-210ENST00000601393 NLRP1Q9C000 1473 aa25.6■■□□□ 1.69
SNRPA-210ENST00000601393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.59■■□□□ 1.692e-9■■□□□ 11.7
SNRPA-210ENST00000601393 PLA2R1Q13018 1463 aa25.58■■□□□ 1.69
SNRPA-210ENST00000601393 NAIPQ13075 1403 aa25.56■■□□□ 1.68
SNRPA-210ENST00000601393 SYNMO15061 1565 aa25.53■■□□□ 1.68
SNRPA-210ENST00000601393 UBR1Q8IWV7 1749 aa25.52■■□□□ 1.68
SNRPA-210ENST00000601393 HFM1A2PYH4 1435 aa25.52■■□□□ 1.68
SNRPA-210ENST00000601393 RPRD2Q5VT52 1461 aaKnown RBP25.52■■□□□ 1.68
SNRPA-210ENST00000601393 E9PCH4 1651 aa25.52■■□□□ 1.68
SNRPA-210ENST00000601393 NOS1P29475 1434 aa25.51■■□□□ 1.67
SNRPA-210ENST00000601393 UGGT1Q9NYU2 1555 aa25.51■■□□□ 1.67
SNRPA-210ENST00000601393 POLR1AO95602 1720 aaPredicted RBP25.51■■□□□ 1.67
SNRPA-210ENST00000601393 PTPRTO14522 1441 aa25.48■■□□□ 1.67
SNRPA-210ENST00000601393 KDM5AP29375 1690 aaKnown RBP25.48■■□□□ 1.67
SNRPA-210ENST00000601393 PIK3C2BO00750 1634 aa25.48■■□□□ 1.67
SNRPA-210ENST00000601393 NEURL4Q96JN8 1562 aa25.46■■□□□ 1.67
SNRPA-210ENST00000601393 NUP155O75694 1391 aa25.43■■□□□ 1.66
SNRPA-210ENST00000601393 DMRT2Q9Y5R5 561 aa25.41■■□□□ 1.66
SNRPA-210ENST00000601393 NCKAP5LQ9HCH0 1330 aa25.39■■□□□ 1.66
SNRPA-210ENST00000601393 PKD2Q13563 968 aa25.39■■□□□ 1.66
SNRPA-210ENST00000601393 ARHGAP23Q9P227 1491 aa25.38■■□□□ 1.65
SNRPA-210ENST00000601393 SLIT1O75093 1534 aa25.37■■□□□ 1.65
SNRPA-210ENST00000601393 THEMISQ8N1K5 641 aaPredicted RBP25.37■■□□□ 1.65
SNRPA-210ENST00000601393 ADGRB3O60242 1522 aa25.37■■□□□ 1.65
SNRPA-210ENST00000601393 SPHKAPQ2M3C7 1700 aa25.36■■□□□ 1.65
SNRPA-210ENST00000601393 MYO5BQ9ULV0 1848 aa25.35■■□□□ 1.65
SNRPA-210ENST00000601393 MED14O60244 1454 aa25.35■■□□□ 1.65
SNRPA-210ENST00000601393 IDI1Q13907 227 aa25.33■■□□□ 1.65
SNRPA-210ENST00000601393 LTBP4Q8N2S1 1624 aa25.32■■□□□ 1.64
SNRPA-210ENST00000601393 TMEM131LA2VDJ0 1609 aa25.31■■□□□ 1.64
SNRPA-210ENST00000601393 IQGAP1P46940 1657 aa25.31■■□□□ 1.64
SNRPA-210ENST00000601393 SLC52A1Q9NWF4 448 aa25.3■■□□□ 1.64
SNRPA-210ENST00000601393 ANKLE2Q86XL3 938 aa25.27■■□□□ 1.64
SNRPA-210ENST00000601393 SCAF11Q99590 1463 aaKnown RBP25.27■■□□□ 1.64
SNRPA-210ENST00000601393 TMEM2Q9UHN6 1383 aa25.26■■□□□ 1.63
SNRPA-210ENST00000601393 NPHP4O75161 1426 aaPredicted RBP25.26■■□□□ 1.63
SNRPA-210ENST00000601393 TRPM2O94759 1503 aa25.24■■□□□ 1.63
SNRPA-210ENST00000601393 CLTCL1P53675 1640 aa25.22■■□□□ 1.63
SNRPA-210ENST00000601393 SETD5Q9C0A6 1442 aa25.21■■□□□ 1.63
SNRPA-210ENST00000601393 LTKP29376 864 aa25.21■■□□□ 1.63
SNRPA-210ENST00000601393 ZFYVE9O95405 1425 aa25.2■■□□□ 1.63
SNRPA-210ENST00000601393 ZNF335Q9H4Z2 1342 aaPredicted RBP25.17■■□□□ 1.62
SNRPA-210ENST00000601393 CERKQ8TCT0 537 aa25.17■■□□□ 1.62
SNRPA-210ENST00000601393 TRIM52Q96A61 297 aa25.17■■□□□ 1.62
SNRPA-210ENST00000601393 STRCP1A6NGW2 1772 aa25.16■■□□□ 1.62
SNRPA-210ENST00000601393 STAG3Q9UJ98 1225 aa25.16■■□□□ 1.62
SNRPA-210ENST00000601393 TXNDC2Q86VQ3 553 aa25.15■■□□□ 1.62
SNRPA-210ENST00000601393 RAB3GAP2Q9H2M9 1393 aa25.14■■□□□ 1.61
SNRPA-210ENST00000601393 IQSEC2Q5JU85 1478 aa25.14■■□□□ 1.61
SNRPA-210ENST00000601393 KIF1BO60333 1816 aa25.14■■□□□ 1.61
SNRPA-210ENST00000601393 SLC4A1APQ9BWU0 796 aaKnown RBP25.12■■□□□ 1.61
SNRPA-210ENST00000601393 RIMS2Q9UQ26 1411 aa25.12■■□□□ 1.61
SNRPA-210ENST00000601393 EID1Q9Y6B2 187 aa25.11■■□□□ 1.61
SNRPA-210ENST00000601393 CPS1P31327 1500 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms