RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 NPATQ14207 1427 aa17.41■□□□□ 0.38
ZNF548-211ENST00000600927 ERBINQ96RT1 1412 aa17.41■□□□□ 0.38
ZNF548-211ENST00000600927 ZMYM3Q14202 1370 aa17.4■□□□□ 0.38
ZNF548-211ENST00000600927 KIF15Q9NS87 1388 aa17.4■□□□□ 0.38
ZNF548-211ENST00000600927 GGT6Q6P531 493 aa17.39■□□□□ 0.37
ZNF548-211ENST00000600927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.39■□□□□ 0.37
ZNF548-211ENST00000600927 NCOA1Q15788 1441 aa17.38■□□□□ 0.37
ZNF548-211ENST00000600927 PRDM15P57071 1507 aaPredicted RBP17.38■□□□□ 0.37
ZNF548-211ENST00000600927 KIF3BO15066 747 aa17.38■□□□□ 0.37
ZNF548-211ENST00000600927 ESF1Q9H501 851 aaKnown RBP17.38■□□□□ 0.37
ZNF548-211ENST00000600927 DEPDC5O75140 1603 aa17.38■□□□□ 0.37
ZNF548-211ENST00000600927 ZC3H13Q5T200 1668 aaKnown RBP17.38■□□□□ 0.37
ZNF548-211ENST00000600927 PTPRKQ15262 1439 aa17.38■□□□□ 0.37
ZNF548-211ENST00000600927 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
ZNF548-211ENST00000600927 UHRF1BP1Q6BDS2 1440 aa17.36■□□□□ 0.37
ZNF548-211ENST00000600927 ABCC3O15438 1527 aa17.36■□□□□ 0.37
ZNF548-211ENST00000600927 SETD1BQ9UPS6 1966 aaKnown RBP17.35■□□□□ 0.37
ZNF548-211ENST00000600927 PLPPR3Q6T4P5 718 aa17.35■□□□□ 0.37
ZNF548-211ENST00000600927 PZPP20742 1482 aa17.35■□□□□ 0.37
ZNF548-211ENST00000600927 ZNF142P52746 1687 aaPredicted RBP17.34■□□□□ 0.37
ZNF548-211ENST00000600927 MYO3AQ8NEV4 1616 aa17.33■□□□□ 0.37
ZNF548-211ENST00000600927 VWDEQ8N2E2 1590 aa17.32■□□□□ 0.36
ZNF548-211ENST00000600927 FAM50AQ14320 339 aaKnown RBP17.32■□□□□ 0.36
ZNF548-211ENST00000600927 RRP7BPQ9NSQ0 103 aa17.31■□□□□ 0.36
ZNF548-211ENST00000600927 ROCK1Q13464 1354 aa17.3■□□□□ 0.36
ZNF548-211ENST00000600927 HSPA2P54652 639 aa17.29■□□□□ 0.36
ZNF548-211ENST00000600927 CHIC2Q9UKJ5 165 aa17.29■□□□□ 0.36
ZNF548-211ENST00000600927 LMTK2Q8IWU2 1503 aa17.29■□□□□ 0.36
ZNF548-211ENST00000600927 CEP152O94986 1710 aa17.29■□□□□ 0.36
ZNF548-211ENST00000600927 CAMSAP1Q5T5Y3 1602 aa17.29■□□□□ 0.36
ZNF548-211ENST00000600927 WASHC2CQ9Y4E1 1318 aa17.28■□□□□ 0.36
ZNF548-211ENST00000600927 HRCP23327 699 aa17.28■□□□□ 0.36
ZNF548-211ENST00000600927 SPATA31D1Q6ZQQ2 1576 aa17.28■□□□□ 0.36
ZNF548-211ENST00000600927 CEP170BQ9Y4F5 1589 aaPredicted RBP17.28■□□□□ 0.36
ZNF548-211ENST00000600927 ZEB1P37275 1124 aaPredicted RBP17.27■□□□□ 0.36
ZNF548-211ENST00000600927 STRCQ7RTU9 1775 aa17.26■□□□□ 0.35
ZNF548-211ENST00000600927 ARHGAP31Q2M1Z3 1444 aa17.26■□□□□ 0.35
ZNF548-211ENST00000600927 ANKRD50Q9ULJ7 1429 aa17.26■□□□□ 0.35
ZNF548-211ENST00000600927 A2ML1A8K2U0 1454 aa17.24■□□□□ 0.35
ZNF548-211ENST00000600927 ERVK-7P63135 1459 aa17.24■□□□□ 0.35
ZNF548-211ENST00000600927 UNC13BO14795 1591 aa17.23■□□□□ 0.35
ZNF548-211ENST00000600927 TNRQ92752 1358 aa17.23■□□□□ 0.35
ZNF548-211ENST00000600927 FBXO31Q5XUX0 539 aaPredicted RBP17.22■□□□□ 0.35
ZNF548-211ENST00000600927 PLA2R1Q13018 1463 aa17.22■□□□□ 0.35
ZNF548-211ENST00000600927 NLRP1Q9C000 1473 aa17.21■□□□□ 0.35
ZNF548-211ENST00000600927 EFCAB6Q5THR3 1501 aa17.21■□□□□ 0.34
ZNF548-211ENST00000600927 KANK1Q14678 1352 aa17.18■□□□□ 0.34
ZNF548-211ENST00000600927 PTPRTO14522 1441 aa17.16■□□□□ 0.34
ZNF548-211ENST00000600927 IQGAP3Q86VI3 1631 aa17.15■□□□□ 0.34
ZNF548-211ENST00000600927 TET3O43151 1660 aa17.15■□□□□ 0.34
ZNF548-211ENST00000600927 GCC2Q8IWJ2 1684 aa17.15■□□□□ 0.34
ZNF548-211ENST00000600927 NOS1P29475 1434 aa17.13■□□□□ 0.33
ZNF548-211ENST00000600927 RPRD2Q5VT52 1461 aaKnown RBP17.13■□□□□ 0.33
ZNF548-211ENST00000600927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.33
ZNF548-211ENST00000600927 SYNMO15061 1565 aa17.13■□□□□ 0.33
ZNF548-211ENST00000600927 UGGT1Q9NYU2 1555 aa17.13■□□□□ 0.33
ZNF548-211ENST00000600927 NAIPQ13075 1403 aa17.12■□□□□ 0.33
ZNF548-211ENST00000600927 NEURL4Q96JN8 1562 aa17.11■□□□□ 0.33
ZNF548-211ENST00000600927 UBR1Q8IWV7 1749 aa17.11■□□□□ 0.33
ZNF548-211ENST00000600927 ITGAEP38570 1179 aa17.11■□□□□ 0.33
ZNF548-211ENST00000600927 HFM1A2PYH4 1435 aa17.11■□□□□ 0.33
ZNF548-211ENST00000600927 DMRT2Q9Y5R5 561 aa17.1■□□□□ 0.33
ZNF548-211ENST00000600927 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
ZNF548-211ENST00000600927 PKD2Q13563 968 aa17.09■□□□□ 0.33
ZNF548-211ENST00000600927 ACIN1Q9UKV3 1341 aaKnown RBP17.09■□□□□ 0.33
ZNF548-211ENST00000600927 POLR1AO95602 1720 aaPredicted RBP17.09■□□□□ 0.33
ZNF548-211ENST00000600927 CLSPNQ9HAW4 1339 aa17.08■□□□□ 0.32
ZNF548-211ENST00000600927 E9PCH4 1651 aa17.07■□□□□ 0.32
ZNF548-211ENST00000600927 PIK3C2BO00750 1634 aa17.07■□□□□ 0.32
ZNF548-211ENST00000600927 CCER1Q8TC90 406 aaPredicted RBP17.07■□□□□ 0.32
ZNF548-211ENST00000600927 MED14O60244 1454 aa17.06■□□□□ 0.32
ZNF548-211ENST00000600927 ARHGAP23Q9P227 1491 aa17.06■□□□□ 0.32
ZNF548-211ENST00000600927 SLIT1O75093 1534 aa17.06■□□□□ 0.32
ZNF548-211ENST00000600927 NCKAP5LQ9HCH0 1330 aa17.05■□□□□ 0.32
ZNF548-211ENST00000600927 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
ZNF548-211ENST00000600927 CFAP65Q6ZU64 1925 aaKnown RBP17.04■□□□□ 0.32
ZNF548-211ENST00000600927 LTBP4Q8N2S1 1624 aa17.04■□□□□ 0.32
ZNF548-211ENST00000600927 THEMISQ8N1K5 641 aaPredicted RBP17.04■□□□□ 0.32
ZNF548-211ENST00000600927 NUP155O75694 1391 aa17.03■□□□□ 0.32
ZNF548-211ENST00000600927 ADGRB3O60242 1522 aa17.03■□□□□ 0.32
ZNF548-211ENST00000600927 IDI1Q13907 227 aa16.99■□□□□ 0.31
ZNF548-211ENST00000600927 IQGAP1P46940 1657 aa16.98■□□□□ 0.31
ZNF548-211ENST00000600927 SLC52A1Q9NWF4 448 aa16.98■□□□□ 0.31
ZNF548-211ENST00000600927 TMEM2Q9UHN6 1383 aa16.98■□□□□ 0.31
ZNF548-211ENST00000600927 SCAF11Q99590 1463 aaKnown RBP16.98■□□□□ 0.31
ZNF548-211ENST00000600927 NPHP4O75161 1426 aaPredicted RBP16.97■□□□□ 0.31
ZNF548-211ENST00000600927 TMEM131LA2VDJ0 1609 aa16.97■□□□□ 0.31
ZNF548-211ENST00000600927 ANKLE2Q86XL3 938 aa16.97■□□□□ 0.31
ZNF548-211ENST00000600927 SPHKAPQ2M3C7 1700 aa16.96■□□□□ 0.3
ZNF548-211ENST00000600927 IQSEC2Q5JU85 1478 aa16.95■□□□□ 0.3
ZNF548-211ENST00000600927 RAB3GAP2Q9H2M9 1393 aa16.95■□□□□ 0.3
ZNF548-211ENST00000600927 CERKQ8TCT0 537 aa16.94■□□□□ 0.3
ZNF548-211ENST00000600927 ZFYVE9O95405 1425 aa16.94■□□□□ 0.3
ZNF548-211ENST00000600927 TRPM2O94759 1503 aa16.93■□□□□ 0.3
ZNF548-211ENST00000600927 LTKP29376 864 aa16.93■□□□□ 0.3
ZNF548-211ENST00000600927 ZNF335Q9H4Z2 1342 aaPredicted RBP16.93■□□□□ 0.3
ZNF548-211ENST00000600927 DHX57Q6P158 1386 aaKnown RBP16.92■□□□□ 0.3
ZNF548-211ENST00000600927 ILDR1Q86SU0 546 aaPredicted RBP16.91■□□□□ 0.3
ZNF548-211ENST00000600927 FBXO41Q8TF61 875 aa16.91■□□□□ 0.3
ZNF548-211ENST00000600927 MYO5BQ9ULV0 1848 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms