RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 SHANK2Q9UPX8 1470 aa24.19■■□□□ 1.46
IRF3-226ENST00000600453 FBXO41Q8TF61 875 aa24.18■■□□□ 1.46
IRF3-226ENST00000600453 DUOX2Q9NRD8 1548 aa24.18■■□□□ 1.46
IRF3-226ENST00000600453 RRP7BPQ9NSQ0 103 aa24.17■■□□□ 1.46
IRF3-226ENST00000600453 DAPK1P53355 1430 aa24.17■■□□□ 1.46
IRF3-226ENST00000600453 STRCQ7RTU9 1775 aa24.16■■□□□ 1.46
IRF3-226ENST00000600453 EIF2AK4Q9P2K8 1649 aaKnown RBP24.15■■□□□ 1.46
IRF3-226ENST00000600453 PTPRTO14522 1441 aa24.15■■□□□ 1.46
IRF3-226ENST00000600453 KIF15Q9NS87 1388 aa24.15■■□□□ 1.46
IRF3-226ENST00000600453 ANKRD30AQ9BXX3 1397 aa24.14■■□□□ 1.45
IRF3-226ENST00000600453 PZPP20742 1482 aa24.13■■□□□ 1.45
IRF3-226ENST00000600453 PKD2Q13563 968 aa24.13■■□□□ 1.45
IRF3-226ENST00000600453 FAM50AQ14320 339 aaKnown RBP24.13■■□□□ 1.45
IRF3-226ENST00000600453 FBXO31Q5XUX0 539 aaPredicted RBP24.13■■□□□ 1.45
IRF3-226ENST00000600453 DNMT1P26358 1616 aaKnown RBP24.13■■□□□ 1.45
IRF3-226ENST00000600453 NCOA1Q15788 1441 aa24.12■■□□□ 1.45
IRF3-226ENST00000600453 RNF17Q9BXT8 1623 aaKnown RBP24.11■■□□□ 1.45
IRF3-226ENST00000600453 CERKQ8TCT0 537 aa24.11■■□□□ 1.45
IRF3-226ENST00000600453 CHIC2Q9UKJ5 165 aa24.11■■□□□ 1.45
IRF3-226ENST00000600453 TNRQ92752 1358 aa24.11■■□□□ 1.45
IRF3-226ENST00000600453 ERBINQ96RT1 1412 aa24.1■■□□□ 1.45
IRF3-226ENST00000600453 CROCC2H7BZ55 1655 aa24.1■■□□□ 1.45
IRF3-226ENST00000600453 CAMSAP1Q5T5Y3 1602 aa24.1■■□□□ 1.45
IRF3-226ENST00000600453 MYO3AQ8NEV4 1616 aa24.09■■□□□ 1.45
IRF3-226ENST00000600453 CEP170BQ9Y4F5 1589 aaPredicted RBP24.08■■□□□ 1.45
IRF3-226ENST00000600453 A2ML1A8K2U0 1454 aa24.08■■□□□ 1.45
IRF3-226ENST00000600453 ZNF142P52746 1687 aaPredicted RBP24.08■■□□□ 1.44
IRF3-226ENST00000600453 ZC3H13Q5T200 1668 aaKnown RBP24.07■■□□□ 1.44
IRF3-226ENST00000600453 PLA2R1Q13018 1463 aa24.07■■□□□ 1.44
IRF3-226ENST00000600453 THEMISQ8N1K5 641 aaPredicted RBP24.06■■□□□ 1.44
IRF3-226ENST00000600453 KANK1Q14678 1352 aa24.05■■□□□ 1.44
IRF3-226ENST00000600453 NCKAP5LQ9HCH0 1330 aa24.05■■□□□ 1.44
IRF3-226ENST00000600453 ABCC3O15438 1527 aa24.05■■□□□ 1.44
IRF3-226ENST00000600453 NLRP1Q9C000 1473 aa24.03■■□□□ 1.44
IRF3-226ENST00000600453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.03■■□□□ 1.445e-6■■■□□ 18.6
IRF3-226ENST00000600453 ANKLE2Q86XL3 938 aa23.99■■□□□ 1.43
IRF3-226ENST00000600453 ADGRL2O95490 1459 aa23.99■■□□□ 1.43
IRF3-226ENST00000600453 MROH1Q8NDA8 1641 aa23.99■■□□□ 1.43
IRF3-226ENST00000600453 ARHGAP31Q2M1Z3 1444 aa23.97■■□□□ 1.43
IRF3-226ENST00000600453 PRDM15P57071 1507 aaPredicted RBP23.96■■□□□ 1.43
IRF3-226ENST00000600453 SPATA31D1Q6ZQQ2 1576 aa23.95■■□□□ 1.42
IRF3-226ENST00000600453 UGGT1Q9NYU2 1555 aa23.94■■□□□ 1.42
IRF3-226ENST00000600453 CFAP65Q6ZU64 1925 aaKnown RBP23.94■■□□□ 1.42
IRF3-226ENST00000600453 ERVK-7P63135 1459 aa23.94■■□□□ 1.42
IRF3-226ENST00000600453 CEP152O94986 1710 aa23.93■■□□□ 1.42
IRF3-226ENST00000600453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.92■■□□□ 1.423e-6■□□□□ 11.3
IRF3-226ENST00000600453 DEPDC5O75140 1603 aa23.92■■□□□ 1.42
IRF3-226ENST00000600453 PPARGC1BQ86YN6 1023 aaKnown RBP23.92■■□□□ 1.42
IRF3-226ENST00000600453 ANKRD50Q9ULJ7 1429 aa23.92■■□□□ 1.42
IRF3-226ENST00000600453 ROCK1Q13464 1354 aa23.89■■□□□ 1.41
IRF3-226ENST00000600453 LMTK2Q8IWU2 1503 aa23.87■■□□□ 1.41
IRF3-226ENST00000600453 LTBP4Q8N2S1 1624 aa23.86■■□□□ 1.41
IRF3-226ENST00000600453 IQSEC2Q5JU85 1478 aa23.85■■□□□ 1.41
IRF3-226ENST00000600453 ZNF335Q9H4Z2 1342 aaPredicted RBP23.84■■□□□ 1.41
IRF3-226ENST00000600453 VWDEQ8N2E2 1590 aa23.84■■□□□ 1.41
IRF3-226ENST00000600453 ITGAEP38570 1179 aa23.84■■□□□ 1.41
IRF3-226ENST00000600453 STAG3Q9UJ98 1225 aa23.84■■□□□ 1.41
IRF3-226ENST00000600453 POLR1AO95602 1720 aaPredicted RBP23.84■■□□□ 1.41
IRF3-226ENST00000600453 MED14O60244 1454 aa23.81■■□□□ 1.4
IRF3-226ENST00000600453 SLC52A1Q9NWF4 448 aa23.8■■□□□ 1.4
IRF3-226ENST00000600453 EID1Q9Y6B2 187 aa23.8■■□□□ 1.4
IRF3-226ENST00000600453 NPHP4O75161 1426 aaPredicted RBP23.79■■□□□ 1.4
IRF3-226ENST00000600453 IDI1Q13907 227 aa23.78■■□□□ 1.4
IRF3-226ENST00000600453 RPRD2Q5VT52 1461 aaKnown RBP23.77■■□□□ 1.4
IRF3-226ENST00000600453 TXNDC2Q86VQ3 553 aa23.77■■□□□ 1.4
IRF3-226ENST00000600453 NEURL4Q96JN8 1562 aa23.77■■□□□ 1.4
IRF3-226ENST00000600453 UBR1Q8IWV7 1749 aa23.76■■□□□ 1.39
IRF3-226ENST00000600453 EFCAB6Q5THR3 1501 aa23.75■■□□□ 1.39
IRF3-226ENST00000600453 NOS1P29475 1434 aa23.74■■□□□ 1.39
IRF3-226ENST00000600453 RRBP1Q9P2E9 1410 aaKnown RBP23.74■■□□□ 1.39
IRF3-226ENST00000600453 SLIT1O75093 1534 aa23.71■■□□□ 1.39
IRF3-226ENST00000600453 CPS1P31327 1500 aa23.71■■□□□ 1.39
IRF3-226ENST00000600453 SCAF11Q99590 1463 aaKnown RBP23.71■■□□□ 1.39
IRF3-226ENST00000600453 LTKP29376 864 aa23.71■■□□□ 1.39
IRF3-226ENST00000600453 ARHGAP23Q9P227 1491 aa23.7■■□□□ 1.38
IRF3-226ENST00000600453 NUP155O75694 1391 aa23.7■■□□□ 1.38
IRF3-226ENST00000600453 TMEM2Q9UHN6 1383 aa23.7■■□□□ 1.38
IRF3-226ENST00000600453 HDGFP51858 240 aaKnown RBP23.7■■□□□ 1.38
IRF3-226ENST00000600453 TET3O43151 1660 aa23.7■■□□□ 1.38
IRF3-226ENST00000600453 KDM5AP29375 1690 aaKnown RBP23.7■■□□□ 1.38
IRF3-226ENST00000600453 IQGAP1P46940 1657 aa23.7■■□□□ 1.38
IRF3-226ENST00000600453 UNC13BO14795 1591 aa23.69■■□□□ 1.38
IRF3-226ENST00000600453 PIK3C2BO00750 1634 aa23.69■■□□□ 1.38
IRF3-226ENST00000600453 UBAP1LF5GYI3 381 aa23.68■■□□□ 1.38
IRF3-226ENST00000600453 GCC2Q8IWJ2 1684 aa23.66■■□□□ 1.38
IRF3-226ENST00000600453 SYNMO15061 1565 aa23.65■■□□□ 1.38
IRF3-226ENST00000600453 TOM1O60784 492 aa23.64■■□□□ 1.37
IRF3-226ENST00000600453 IQGAP3Q86VI3 1631 aa23.62■■□□□ 1.37
IRF3-226ENST00000600453 ADGRB3O60242 1522 aa23.59■■□□□ 1.37
IRF3-226ENST00000600453 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.58■■□□□ 1.37
IRF3-226ENST00000600453 BCANQ96GW7 911 aa23.58■■□□□ 1.37
IRF3-226ENST00000600453 CHGAP10645 457 aaKnown RBP23.57■■□□□ 1.36
IRF3-226ENST00000600453 E9PCH4 1651 aa23.57■■□□□ 1.36
IRF3-226ENST00000600453 PPP1R15AO75807 674 aaPredicted RBP23.55■■□□□ 1.36
IRF3-226ENST00000600453 NAIPQ13075 1403 aa23.55■■□□□ 1.36
IRF3-226ENST00000600453 KCNA6P17658 529 aa23.51■■□□□ 1.35
IRF3-226ENST00000600453 TRIM52Q96A61 297 aa23.51■■□□□ 1.35
IRF3-226ENST00000600453 SLC26A8Q96RN1 970 aa23.51■■□□□ 1.35
IRF3-226ENST00000600453 HFM1A2PYH4 1435 aa23.5■■□□□ 1.35
IRF3-226ENST00000600453 RIMS2Q9UQ26 1411 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms