RNA–Protein interactions for RNA: ENST00000598833.1

RCN3-205, Transcript of reticulocalbin 3, humanhuman

TSL 3

Gene RCN3, Length 607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN3-205ENST00000598833 VWDEQ8N2E2 1590 aa24.42■■□□□ 1.5
RCN3-205ENST00000598833 PHF23Q9BUL5 403 aaPredicted RBP24.42■■□□□ 1.5
RCN3-205ENST00000598833 PLEKHH2Q8IVE3 1493 aa24.42■■□□□ 1.5
RCN3-205ENST00000598833 SENP3Q9H4L4 574 aaPredicted RBP24.4■■□□□ 1.5
RCN3-205ENST00000598833 CFDP1Q9UEE9 299 aaPredicted RBP24.4■■□□□ 1.5
RCN3-205ENST00000598833 FBXO31Q5XUX0 539 aaPredicted RBP24.39■■□□□ 1.49
RCN3-205ENST00000598833 TNRQ92752 1358 aa24.39■■□□□ 1.49
RCN3-205ENST00000598833 CCNB3Q8WWL7 1395 aa24.36■■□□□ 1.49
RCN3-205ENST00000598833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.35■■□□□ 1.49
RCN3-205ENST00000598833 ZNF644Q9H582 1327 aaPredicted RBP24.35■■□□□ 1.49
RCN3-205ENST00000598833 PZPP20742 1482 aa24.32■■□□□ 1.48
RCN3-205ENST00000598833 STRCP1A6NGW2 1772 aa24.32■■□□□ 1.48
RCN3-205ENST00000598833 KDM5DQ9BY66 1539 aa24.3■■□□□ 1.48
RCN3-205ENST00000598833 TIAM1Q13009 1591 aa24.3■■□□□ 1.48
RCN3-205ENST00000598833 NPHP4O75161 1426 aaPredicted RBP24.3■■□□□ 1.48
RCN3-205ENST00000598833 MBD5Q9P267 1494 aa24.3■■□□□ 1.48
RCN3-205ENST00000598833 IQGAP1P46940 1657 aa24.28■■□□□ 1.48
RCN3-205ENST00000598833 DEPDC5O75140 1603 aa24.28■■□□□ 1.48
RCN3-205ENST00000598833 ANKLE2Q86XL3 938 aa24.27■■□□□ 1.48
RCN3-205ENST00000598833 DHX29Q7Z478 1369 aaKnown RBP24.27■■□□□ 1.48
RCN3-205ENST00000598833 UGGT1Q9NYU2 1555 aa24.26■■□□□ 1.47
RCN3-205ENST00000598833 KIF3BO15066 747 aa24.26■■□□□ 1.47
RCN3-205ENST00000598833 MED14O60244 1454 aa24.26■■□□□ 1.47
RCN3-205ENST00000598833 RNF17Q9BXT8 1623 aaKnown RBP24.25■■□□□ 1.47
RCN3-205ENST00000598833 MTUS2Q5JR59 1369 aa24.25■■□□□ 1.47
RCN3-205ENST00000598833 LRRC7Q96NW7 1537 aa24.25■■□□□ 1.47
RCN3-205ENST00000598833 RTEL1-TNFRSF6BF6WH68 1400 aa24.24■■□□□ 1.47
RCN3-205ENST00000598833 FAM135AQ9P2D6 1515 aa24.22■■□□□ 1.47
RCN3-205ENST00000598833 NLRP1Q9C000 1473 aa24.22■■□□□ 1.47
RCN3-205ENST00000598833 VPS8Q8N3P4 1428 aa24.22■■□□□ 1.47
RCN3-205ENST00000598833 MIA2Q96PC5 1412 aa24.22■■□□□ 1.47
RCN3-205ENST00000598833 SYNMO15061 1565 aa24.21■■□□□ 1.47
RCN3-205ENST00000598833 THEMISQ8N1K5 641 aaPredicted RBP24.2■■□□□ 1.46
RCN3-205ENST00000598833 RGS17Q9UGC6 210 aaPredicted RBP24.2■■□□□ 1.46
RCN3-205ENST00000598833 EHBP1L1Q8N3D4 1523 aa24.19■■□□□ 1.46
RCN3-205ENST00000598833 WASHC2CQ9Y4E1 1318 aa24.18■■□□□ 1.46
RCN3-205ENST00000598833 CCDC141Q6ZP82 1450 aa24.16■■□□□ 1.46
RCN3-205ENST00000598833 ZC3H13Q5T200 1668 aaKnown RBP24.15■■□□□ 1.46
RCN3-205ENST00000598833 CAMSAP2Q08AD1 1489 aa24.13■■□□□ 1.45
RCN3-205ENST00000598833 XIRP1Q702N8 1843 aaKnown RBP24.11■■□□□ 1.45
RCN3-205ENST00000598833 ABCC3O15438 1527 aa24.09■■□□□ 1.45
RCN3-205ENST00000598833 ERVK-7P63135 1459 aa24.07■■□□□ 1.44
RCN3-205ENST00000598833 UBR1Q8IWV7 1749 aa24.06■■□□□ 1.44
RCN3-205ENST00000598833 POTEAQ6S8J7 498 aa24.04■■□□□ 1.44
RCN3-205ENST00000598833 NCOA2Q15596 1464 aa24.04■■□□□ 1.44
RCN3-205ENST00000598833 CFAP65Q6ZU64 1925 aaKnown RBP24.04■■□□□ 1.44
RCN3-205ENST00000598833 LRRC9Q6ZRR7 1453 aa24.03■■□□□ 1.44
RCN3-205ENST00000598833 SCAF11Q99590 1463 aaKnown RBP24.03■■□□□ 1.44
RCN3-205ENST00000598833 SETD1AO15047 1707 aaKnown RBP24.03■■□□□ 1.44
RCN3-205ENST00000598833 CEP152O94986 1710 aa24.02■■□□□ 1.44
RCN3-205ENST00000598833 MROH1Q8NDA8 1641 aa24.01■■□□□ 1.43
RCN3-205ENST00000598833 ARHGEF5Q12774 1597 aa24■■□□□ 1.43
RCN3-205ENST00000598833 MAP3K1Q13233 1512 aa24■■□□□ 1.43
RCN3-205ENST00000598833 LTKP29376 864 aa23.97■■□□□ 1.43
RCN3-205ENST00000598833 KANK4Q5T7N3 995 aaPredicted RBP23.97■■□□□ 1.43
RCN3-205ENST00000598833 ARHGAP23Q9P227 1491 aa23.96■■□□□ 1.43
RCN3-205ENST00000598833 EIF2AK4Q9P2K8 1649 aaKnown RBP23.94■■□□□ 1.42
RCN3-205ENST00000598833 SLIT1O75093 1534 aa23.94■■□□□ 1.42
RCN3-205ENST00000598833 ROBO1Q9Y6N7 1651 aa23.93■■□□□ 1.42
RCN3-205ENST00000598833 FAM135BQ49AJ0 1406 aa23.93■■□□□ 1.42
RCN3-205ENST00000598833 RSPH4AQ5TD94 716 aa23.92■■□□□ 1.42
RCN3-205ENST00000598833 TXNDC2Q86VQ3 553 aa23.92■■□□□ 1.42
RCN3-205ENST00000598833 MAST1Q9Y2H9 1570 aa23.91■■□□□ 1.42
RCN3-205ENST00000598833 TSPY4P0CV99 314 aa23.89■■□□□ 1.41
RCN3-205ENST00000598833 TSPY10P0CW01 314 aa23.89■■□□□ 1.41
RCN3-205ENST00000598833 TMEM94Q12767 1356 aa23.89■■□□□ 1.41
RCN3-205ENST00000598833 PIK3C2BO00750 1634 aa23.88■■□□□ 1.41
RCN3-205ENST00000598833 RBM33Q96EV2 1170 aaKnown RBP23.86■■□□□ 1.41
RCN3-205ENST00000598833 TMEM2Q9UHN6 1383 aa23.8■■□□□ 1.4
RCN3-205ENST00000598833 PRDM15P57071 1507 aaPredicted RBP23.8■■□□□ 1.4
RCN3-205ENST00000598833 MYOM3Q5VTT5 1437 aa23.8■■□□□ 1.4
RCN3-205ENST00000598833 EID1Q9Y6B2 187 aa23.8■■□□□ 1.4
RCN3-205ENST00000598833 PHLPP1O60346 1717 aa23.79■■□□□ 1.4
RCN3-205ENST00000598833 APLP2Q06481 763 aa23.79■■□□□ 1.4
RCN3-205ENST00000598833 ARHGAP31Q2M1Z3 1444 aa23.77■■□□□ 1.4
RCN3-205ENST00000598833 DUOX2Q9NRD8 1548 aa23.77■■□□□ 1.4
RCN3-205ENST00000598833 EFCAB6Q5THR3 1501 aa23.75■■□□□ 1.39
RCN3-205ENST00000598833 PROSER2Q86WR7 435 aaPredicted RBP23.75■■□□□ 1.39
RCN3-205ENST00000598833 SLC26A8Q96RN1 970 aa23.75■■□□□ 1.39
RCN3-205ENST00000598833 NWD1Q149M9 1564 aa23.74■■□□□ 1.39
RCN3-205ENST00000598833 TET3O43151 1660 aa23.74■■□□□ 1.39
RCN3-205ENST00000598833 KCNA6P17658 529 aa23.74■■□□□ 1.39
RCN3-205ENST00000598833 STAG3Q9UJ98 1225 aa23.72■■□□□ 1.39
RCN3-205ENST00000598833 LRP6O75581 1613 aa23.71■■□□□ 1.39
RCN3-205ENST00000598833 NKTRP30414 1462 aaKnown RBP23.71■■□□□ 1.39
RCN3-205ENST00000598833 COL16A1Q07092 1604 aaPredicted RBP23.7■■□□□ 1.39
RCN3-205ENST00000598833 KIF15Q9NS87 1388 aa23.7■■□□□ 1.38
RCN3-205ENST00000598833 JCADQ9P266 1359 aa23.7■■□□□ 1.38
RCN3-205ENST00000598833 KDM5AP29375 1690 aaKnown RBP23.7■■□□□ 1.38
RCN3-205ENST00000598833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.69■■□□□ 1.385e-6■■■□□ 15.2
RCN3-205ENST00000598833 PTPN23Q9H3S7 1636 aa23.68■■□□□ 1.38
RCN3-205ENST00000598833 MSH6P52701 1360 aa23.67■■□□□ 1.38
RCN3-205ENST00000598833 CROCC2H7BZ55 1655 aa23.67■■□□□ 1.38
RCN3-205ENST00000598833 IDI1Q13907 227 aa23.66■■□□□ 1.38
RCN3-205ENST00000598833 UPF1Q92900 1129 aaKnown RBP eCLIP23.66■■□□□ 1.381e-6■■■■□ 25.6
RCN3-205ENST00000598833 FGD6Q6ZV73 1430 aa23.66■■□□□ 1.38
RCN3-205ENST00000598833 ERBINQ96RT1 1412 aa23.66■■□□□ 1.38
RCN3-205ENST00000598833 ADGRB3O60242 1522 aa23.65■■□□□ 1.38
RCN3-205ENST00000598833 TRIM52Q96A61 297 aa23.65■■□□□ 1.38
RCN3-205ENST00000598833 SLAIN2Q9P270 581 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms