RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 CFDP1Q9UEE9 299 aaPredicted RBP17.95■□□□□ 0.46
ZNF548-207ENST00000597400 ZNF644Q9H582 1327 aaPredicted RBP17.95■□□□□ 0.46
ZNF548-207ENST00000597400 CCNB3Q8WWL7 1395 aa17.94■□□□□ 0.46
ZNF548-207ENST00000597400 KDM5DQ9BY66 1539 aa17.94■□□□□ 0.46
ZNF548-207ENST00000597400 PZPP20742 1482 aa17.93■□□□□ 0.46
ZNF548-207ENST00000597400 DEPDC5O75140 1603 aa17.92■□□□□ 0.46
ZNF548-207ENST00000597400 PIP4K2BP78356 416 aa17.92■□□□□ 0.46
ZNF548-207ENST00000597400 SCAF1Q9H7N4 1312 aaKnown RBP17.92■□□□□ 0.46
ZNF548-207ENST00000597400 IQGAP1P46940 1657 aa17.91■□□□□ 0.46
ZNF548-207ENST00000597400 FBXO31Q5XUX0 539 aaPredicted RBP17.91■□□□□ 0.46
ZNF548-207ENST00000597400 EHBP1L1Q8N3D4 1523 aa17.91■□□□□ 0.46
ZNF548-207ENST00000597400 TNRQ92752 1358 aa17.91■□□□□ 0.46
ZNF548-207ENST00000597400 RTEL1-TNFRSF6BF6WH68 1400 aa17.89■□□□□ 0.46
ZNF548-207ENST00000597400 FAM135AQ9P2D6 1515 aa17.89■□□□□ 0.45
ZNF548-207ENST00000597400 MTUS2Q5JR59 1369 aa17.88■□□□□ 0.45
ZNF548-207ENST00000597400 DHX29Q7Z478 1369 aaKnown RBP17.88■□□□□ 0.45
ZNF548-207ENST00000597400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.88■□□□□ 0.45
ZNF548-207ENST00000597400 ZC3H13Q5T200 1668 aaKnown RBP17.87■□□□□ 0.45
ZNF548-207ENST00000597400 MED14O60244 1454 aa17.87■□□□□ 0.45
ZNF548-207ENST00000597400 UGGT1Q9NYU2 1555 aa17.87■□□□□ 0.45
ZNF548-207ENST00000597400 RNF17Q9BXT8 1623 aaKnown RBP17.86■□□□□ 0.45
ZNF548-207ENST00000597400 SYNMO15061 1565 aa17.85■□□□□ 0.45
ZNF548-207ENST00000597400 CCDC141Q6ZP82 1450 aa17.85■□□□□ 0.45
ZNF548-207ENST00000597400 XIRP1Q702N8 1843 aaKnown RBP17.85■□□□□ 0.45
ZNF548-207ENST00000597400 CAMSAP2Q08AD1 1489 aa17.84■□□□□ 0.45
ZNF548-207ENST00000597400 TOM1O60784 492 aa17.84■□□□□ 0.45
ZNF548-207ENST00000597400 NLRP1Q9C000 1473 aa17.83■□□□□ 0.45
ZNF548-207ENST00000597400 NPHP4O75161 1426 aaPredicted RBP17.83■□□□□ 0.45
ZNF548-207ENST00000597400 CEP162Q5TB80 1403 aa17.83■□□□□ 0.45
ZNF548-207ENST00000597400 LRRC7Q96NW7 1537 aa17.82■□□□□ 0.44
ZNF548-207ENST00000597400 MIA2Q96PC5 1412 aa17.81■□□□□ 0.44
ZNF548-207ENST00000597400 CEP152O94986 1710 aa17.81■□□□□ 0.44
ZNF548-207ENST00000597400 UBR1Q8IWV7 1749 aa17.81■□□□□ 0.44
ZNF548-207ENST00000597400 KIF3BO15066 747 aa17.81■□□□□ 0.44
ZNF548-207ENST00000597400 CFAP65Q6ZU64 1925 aaKnown RBP17.8■□□□□ 0.44
ZNF548-207ENST00000597400 MROH1Q8NDA8 1641 aa17.8■□□□□ 0.44
ZNF548-207ENST00000597400 ARHGEF5Q12774 1597 aa17.79■□□□□ 0.44
ZNF548-207ENST00000597400 ABCC3O15438 1527 aa17.79■□□□□ 0.44
ZNF548-207ENST00000597400 ANKLE2Q86XL3 938 aa17.78■□□□□ 0.44
ZNF548-207ENST00000597400 NCOA2Q15596 1464 aa17.77■□□□□ 0.44
ZNF548-207ENST00000597400 WASHC2CQ9Y4E1 1318 aa17.76■□□□□ 0.43
ZNF548-207ENST00000597400 SENP3Q9H4L4 574 aaPredicted RBP17.76■□□□□ 0.43
ZNF548-207ENST00000597400 EIF2AK4Q9P2K8 1649 aaKnown RBP17.75■□□□□ 0.43
ZNF548-207ENST00000597400 ERVK-7P63135 1459 aa17.75■□□□□ 0.43
ZNF548-207ENST00000597400 THEMISQ8N1K5 641 aaPredicted RBP17.74■□□□□ 0.43
ZNF548-207ENST00000597400 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
ZNF548-207ENST00000597400 MAST1Q9Y2H9 1570 aa17.74■□□□□ 0.43
ZNF548-207ENST00000597400 RGS17Q9UGC6 210 aaPredicted RBP17.7■□□□□ 0.42
ZNF548-207ENST00000597400 SCAF11Q99590 1463 aaKnown RBP17.68■□□□□ 0.42
ZNF548-207ENST00000597400 ARHGAP23Q9P227 1491 aa17.67■□□□□ 0.42
ZNF548-207ENST00000597400 SLIT1O75093 1534 aa17.67■□□□□ 0.42
ZNF548-207ENST00000597400 PIK3C2BO00750 1634 aa17.66■□□□□ 0.42
ZNF548-207ENST00000597400 SETD1AO15047 1707 aaKnown RBP17.66■□□□□ 0.42
ZNF548-207ENST00000597400 PRDM15P57071 1507 aaPredicted RBP17.63■□□□□ 0.41
ZNF548-207ENST00000597400 CROCC2H7BZ55 1655 aa17.63■□□□□ 0.41
ZNF548-207ENST00000597400 ROBO1Q9Y6N7 1651 aa17.63■□□□□ 0.41
ZNF548-207ENST00000597400 LTKP29376 864 aa17.62■□□□□ 0.41
ZNF548-207ENST00000597400 RSPH4AQ5TD94 716 aa17.62■□□□□ 0.41
ZNF548-207ENST00000597400 MAP3K1Q13233 1512 aa17.61■□□□□ 0.41
ZNF548-207ENST00000597400 LRRC9Q6ZRR7 1453 aa17.58■□□□□ 0.41
ZNF548-207ENST00000597400 KDM5AP29375 1690 aaKnown RBP17.58■□□□□ 0.4
ZNF548-207ENST00000597400 DUOX2Q9NRD8 1548 aa17.57■□□□□ 0.4
ZNF548-207ENST00000597400 TSPY4P0CV99 314 aa17.57■□□□□ 0.4
ZNF548-207ENST00000597400 TSPY10P0CW01 314 aa17.57■□□□□ 0.4
ZNF548-207ENST00000597400 ARHGAP31Q2M1Z3 1444 aa17.55■□□□□ 0.4
ZNF548-207ENST00000597400 POTEAQ6S8J7 498 aa17.55■□□□□ 0.4
ZNF548-207ENST00000597400 FAM135BQ49AJ0 1406 aa17.55■□□□□ 0.4
ZNF548-207ENST00000597400 TET3O43151 1660 aa17.55■□□□□ 0.4
ZNF548-207ENST00000597400 NWD1Q149M9 1564 aa17.54■□□□□ 0.4
ZNF548-207ENST00000597400 TXNDC2Q86VQ3 553 aa17.53■□□□□ 0.4
ZNF548-207ENST00000597400 PHLPP1O60346 1717 aa17.52■□□□□ 0.39
ZNF548-207ENST00000597400 TMEM94Q12767 1356 aa17.52■□□□□ 0.39
ZNF548-207ENST00000597400 EFCAB6Q5THR3 1501 aa17.52■□□□□ 0.39
ZNF548-207ENST00000597400 MYO5BQ9ULV0 1848 aa17.51■□□□□ 0.39
ZNF548-207ENST00000597400 TMEM2Q9UHN6 1383 aa17.51■□□□□ 0.39
ZNF548-207ENST00000597400 MYOM3Q5VTT5 1437 aa17.5■□□□□ 0.39
ZNF548-207ENST00000597400 ERBINQ96RT1 1412 aa17.49■□□□□ 0.39
ZNF548-207ENST00000597400 RBM33Q96EV2 1170 aaKnown RBP17.48■□□□□ 0.39
ZNF548-207ENST00000597400 KIF15Q9NS87 1388 aa17.48■□□□□ 0.39
ZNF548-207ENST00000597400 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
ZNF548-207ENST00000597400 ADGRB3O60242 1522 aa17.47■□□□□ 0.39
ZNF548-207ENST00000597400 KANK4Q5T7N3 995 aaPredicted RBP17.47■□□□□ 0.39
ZNF548-207ENST00000597400 CHD2O14647 1828 aaKnown RBP17.47■□□□□ 0.39
ZNF548-207ENST00000597400 COL16A1Q07092 1604 aaPredicted RBP17.47■□□□□ 0.39
ZNF548-207ENST00000597400 PTPN23Q9H3S7 1636 aa17.47■□□□□ 0.39
ZNF548-207ENST00000597400 NKTRP30414 1462 aaKnown RBP17.46■□□□□ 0.39
ZNF548-207ENST00000597400 LMTK2Q8IWU2 1503 aa17.46■□□□□ 0.39
ZNF548-207ENST00000597400 ABCC5O15440 1437 aa17.45■□□□□ 0.38
ZNF548-207ENST00000597400 EID1Q9Y6B2 187 aa17.44■□□□□ 0.38
ZNF548-207ENST00000597400 GCC2Q8IWJ2 1684 aa17.44■□□□□ 0.38
ZNF548-207ENST00000597400 SLC26A8Q96RN1 970 aa17.42■□□□□ 0.38
ZNF548-207ENST00000597400 LRP6O75581 1613 aa17.42■□□□□ 0.38
ZNF548-207ENST00000597400 NOS1P29475 1434 aa17.41■□□□□ 0.38
ZNF548-207ENST00000597400 KCNA6P17658 529 aa17.41■□□□□ 0.38
ZNF548-207ENST00000597400 DAPK1P53355 1430 aa17.4■□□□□ 0.38
ZNF548-207ENST00000597400 IDI1Q13907 227 aa17.4■□□□□ 0.38
ZNF548-207ENST00000597400 RRP7BPQ9NSQ0 103 aa17.4■□□□□ 0.38
ZNF548-207ENST00000597400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.39■□□□□ 0.37
ZNF548-207ENST00000597400 PROSER2Q86WR7 435 aaPredicted RBP17.38■□□□□ 0.37
ZNF548-207ENST00000597400 SHPRHQ149N8 1683 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms