RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 PTPN23Q9H3S7 1636 aa24.24■■□□□ 1.47
PPFIA4-208ENST00000597023 CERKQ8TCT0 537 aa24.23■■□□□ 1.47
PPFIA4-208ENST00000597023 CHIC2Q9UKJ5 165 aa24.23■■□□□ 1.47
PPFIA4-208ENST00000597023 NCKAP5LQ9HCH0 1330 aa24.23■■□□□ 1.47
PPFIA4-208ENST00000597023 NCOA1Q15788 1441 aa24.21■■□□□ 1.47
PPFIA4-208ENST00000597023 CAMSAP1Q5T5Y3 1602 aa24.21■■□□□ 1.47
PPFIA4-208ENST00000597023 KDM5DQ9BY66 1539 aa24.2■■□□□ 1.47
PPFIA4-208ENST00000597023 DAPK1P53355 1430 aa24.18■■□□□ 1.46
PPFIA4-208ENST00000597023 FAM50AQ14320 339 aaKnown RBP24.18■■□□□ 1.46
PPFIA4-208ENST00000597023 MYO3AQ8NEV4 1616 aa24.17■■□□□ 1.46
PPFIA4-208ENST00000597023 TNRQ92752 1358 aa24.17■■□□□ 1.46
PPFIA4-208ENST00000597023 KIF15Q9NS87 1388 aa24.17■■□□□ 1.46
PPFIA4-208ENST00000597023 TCOF1Q13428 1488 aaKnown RBP24.17■■□□□ 1.46
PPFIA4-208ENST00000597023 PTPRTO14522 1441 aa24.17■■□□□ 1.46
PPFIA4-208ENST00000597023 PPARGC1BQ86YN6 1023 aaKnown RBP24.16■■□□□ 1.46
PPFIA4-208ENST00000597023 CEP170BQ9Y4F5 1589 aaPredicted RBP24.16■■□□□ 1.46
PPFIA4-208ENST00000597023 PZPP20742 1482 aa24.15■■□□□ 1.46
PPFIA4-208ENST00000597023 DUOX2Q9NRD8 1548 aa24.14■■□□□ 1.45
PPFIA4-208ENST00000597023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.13■■□□□ 1.45
PPFIA4-208ENST00000597023 SHANK2Q9UPX8 1470 aa24.13■■□□□ 1.45
PPFIA4-208ENST00000597023 A2ML1A8K2U0 1454 aa24.12■■□□□ 1.45
PPFIA4-208ENST00000597023 DNMT1P26358 1616 aaKnown RBP24.11■■□□□ 1.45
PPFIA4-208ENST00000597023 RNF17Q9BXT8 1623 aaKnown RBP24.11■■□□□ 1.45
PPFIA4-208ENST00000597023 ABCC3O15438 1527 aa24.1■■□□□ 1.45
PPFIA4-208ENST00000597023 FAM135AQ9P2D6 1515 aa24.1■■□□□ 1.45
PPFIA4-208ENST00000597023 CROCC2H7BZ55 1655 aa24.09■■□□□ 1.45
PPFIA4-208ENST00000597023 ZNF142P52746 1687 aaPredicted RBP24.09■■□□□ 1.45
PPFIA4-208ENST00000597023 PKD2Q13563 968 aa24.09■■□□□ 1.45
PPFIA4-208ENST00000597023 MROH1Q8NDA8 1641 aa24.08■■□□□ 1.45
PPFIA4-208ENST00000597023 EIF2AK4Q9P2K8 1649 aaKnown RBP24.08■■□□□ 1.45
PPFIA4-208ENST00000597023 ANKRD30AQ9BXX3 1397 aa24.07■■□□□ 1.44
PPFIA4-208ENST00000597023 PLA2R1Q13018 1463 aa24.07■■□□□ 1.44
PPFIA4-208ENST00000597023 ERBINQ96RT1 1412 aa24.05■■□□□ 1.44
PPFIA4-208ENST00000597023 ZNF335Q9H4Z2 1342 aaPredicted RBP24.04■■□□□ 1.44
PPFIA4-208ENST00000597023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.03■■□□□ 1.44
PPFIA4-208ENST00000597023 CEP152O94986 1710 aa24.01■■□□□ 1.43
PPFIA4-208ENST00000597023 ERVK-7P63135 1459 aa24■■□□□ 1.43
PPFIA4-208ENST00000597023 THEMISQ8N1K5 641 aaPredicted RBP24■■□□□ 1.43
PPFIA4-208ENST00000597023 NLRP1Q9C000 1473 aa24■■□□□ 1.43
PPFIA4-208ENST00000597023 LTBP4Q8N2S1 1624 aa23.99■■□□□ 1.43
PPFIA4-208ENST00000597023 ZC3H13Q5T200 1668 aaKnown RBP23.99■■□□□ 1.43
PPFIA4-208ENST00000597023 ANKLE2Q86XL3 938 aa23.98■■□□□ 1.43
PPFIA4-208ENST00000597023 PRDM15P57071 1507 aaPredicted RBP23.97■■□□□ 1.43
PPFIA4-208ENST00000597023 KANK1Q14678 1352 aa23.97■■□□□ 1.43
PPFIA4-208ENST00000597023 SPATA31D1Q6ZQQ2 1576 aa23.97■■□□□ 1.43
PPFIA4-208ENST00000597023 UGGT1Q9NYU2 1555 aa23.97■■□□□ 1.43
PPFIA4-208ENST00000597023 ITGAEP38570 1179 aa23.96■■□□□ 1.43
PPFIA4-208ENST00000597023 ADGRL2O95490 1459 aa23.95■■□□□ 1.42
PPFIA4-208ENST00000597023 CFAP65Q6ZU64 1925 aaKnown RBP23.94■■□□□ 1.42
PPFIA4-208ENST00000597023 ARHGAP31Q2M1Z3 1444 aa23.92■■□□□ 1.42
PPFIA4-208ENST00000597023 ANKRD50Q9ULJ7 1429 aa23.91■■□□□ 1.42
PPFIA4-208ENST00000597023 DEPDC5O75140 1603 aa23.9■■□□□ 1.42
PPFIA4-208ENST00000597023 NEURL4Q96JN8 1562 aa23.9■■□□□ 1.42
PPFIA4-208ENST00000597023 NPHP4O75161 1426 aaPredicted RBP23.86■■□□□ 1.41
PPFIA4-208ENST00000597023 VWDEQ8N2E2 1590 aa23.85■■□□□ 1.41
PPFIA4-208ENST00000597023 POLR1AO95602 1720 aaPredicted RBP23.84■■□□□ 1.41
PPFIA4-208ENST00000597023 STAG3Q9UJ98 1225 aa23.84■■□□□ 1.41
PPFIA4-208ENST00000597023 LMTK2Q8IWU2 1503 aa23.84■■□□□ 1.41
PPFIA4-208ENST00000597023 IDI1Q13907 227 aa23.83■■□□□ 1.41
PPFIA4-208ENST00000597023 LTKP29376 864 aa23.82■■□□□ 1.4
PPFIA4-208ENST00000597023 TXNDC2Q86VQ3 553 aa23.82■■□□□ 1.4
PPFIA4-208ENST00000597023 UBAP1LF5GYI3 381 aa23.81■■□□□ 1.4
PPFIA4-208ENST00000597023 MED14O60244 1454 aa23.81■■□□□ 1.4
PPFIA4-208ENST00000597023 IQSEC2Q5JU85 1478 aa23.8■■□□□ 1.4
PPFIA4-208ENST00000597023 UBR1Q8IWV7 1749 aa23.79■■□□□ 1.4
PPFIA4-208ENST00000597023 ROCK1Q13464 1354 aa23.78■■□□□ 1.4
PPFIA4-208ENST00000597023 EFCAB6Q5THR3 1501 aa23.77■■□□□ 1.4
PPFIA4-208ENST00000597023 PIK3C2BO00750 1634 aa23.76■■□□□ 1.39
PPFIA4-208ENST00000597023 NOS1P29475 1434 aa23.76■■□□□ 1.39
PPFIA4-208ENST00000597023 EID1Q9Y6B2 187 aa23.75■■□□□ 1.39
PPFIA4-208ENST00000597023 SCAF11Q99590 1463 aaKnown RBP23.75■■□□□ 1.39
PPFIA4-208ENST00000597023 SYNMO15061 1565 aa23.74■■□□□ 1.39
PPFIA4-208ENST00000597023 ARHGAP23Q9P227 1491 aa23.74■■□□□ 1.39
PPFIA4-208ENST00000597023 IQGAP1P46940 1657 aa23.73■■□□□ 1.39
PPFIA4-208ENST00000597023 TMEM2Q9UHN6 1383 aa23.73■■□□□ 1.39
PPFIA4-208ENST00000597023 SENP3Q9H4L4 574 aaPredicted RBP23.72■■□□□ 1.39
PPFIA4-208ENST00000597023 SLIT1O75093 1534 aa23.72■■□□□ 1.39
PPFIA4-208ENST00000597023 SLC52A1Q9NWF4 448 aa23.71■■□□□ 1.39
PPFIA4-208ENST00000597023 CPS1P31327 1500 aa23.7■■□□□ 1.38
PPFIA4-208ENST00000597023 NUP155O75694 1391 aa23.7■■□□□ 1.38
PPFIA4-208ENST00000597023 SCAF1Q9H7N4 1312 aaKnown RBP23.69■■□□□ 1.38
PPFIA4-208ENST00000597023 PIP4K2BP78356 416 aa23.68■■□□□ 1.38
PPFIA4-208ENST00000597023 UNC13BO14795 1591 aa23.68■■□□□ 1.38
PPFIA4-208ENST00000597023 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
PPFIA4-208ENST00000597023 CHGAP10645 457 aaKnown RBP23.67■■□□□ 1.38
PPFIA4-208ENST00000597023 RPRD2Q5VT52 1461 aaKnown RBP23.67■■□□□ 1.38
PPFIA4-208ENST00000597023 TET3O43151 1660 aa23.66■■□□□ 1.38
PPFIA4-208ENST00000597023 SLC26A8Q96RN1 970 aa23.64■■□□□ 1.37
PPFIA4-208ENST00000597023 TOM1O60784 492 aa23.63■■□□□ 1.37
PPFIA4-208ENST00000597023 BCANQ96GW7 911 aa23.63■■□□□ 1.37
PPFIA4-208ENST00000597023 ADGRB3O60242 1522 aa23.63■■□□□ 1.37
PPFIA4-208ENST00000597023 STRCP1A6NGW2 1772 aa23.62■■□□□ 1.37
PPFIA4-208ENST00000597023 LRRC7Q96NW7 1537 aa23.6■■□□□ 1.37
PPFIA4-208ENST00000597023 NUTM2DQ5VT03 806 aaPredicted RBP23.59■■□□□ 1.37
PPFIA4-208ENST00000597023 E9PCH4 1651 aa23.59■■□□□ 1.37
PPFIA4-208ENST00000597023 GCC2Q8IWJ2 1684 aa23.59■■□□□ 1.37
PPFIA4-208ENST00000597023 IQGAP3Q86VI3 1631 aa23.59■■□□□ 1.37
PPFIA4-208ENST00000597023 KDM5AP29375 1690 aaKnown RBP23.57■■□□□ 1.36
PPFIA4-208ENST00000597023 PPP1R15AO75807 674 aaPredicted RBP23.56■■□□□ 1.36
PPFIA4-208ENST00000597023 RIMS2Q9UQ26 1411 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms