RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 KIDINS220Q9ULH0 1771 aa18.22■□□□□ 0.51
DDX39A-219ENST00000592927 A2ML1A8K2U0 1454 aa18.21■□□□□ 0.51
DDX39A-219ENST00000592927 ABCC1P33527 1531 aa18.21■□□□□ 0.51
DDX39A-219ENST00000592927 CLTCQ00610 1675 aaKnown RBP18.19■□□□□ 0.5
DDX39A-219ENST00000592927 ANKLE2Q86XL3 938 aa18.19■□□□□ 0.5
DDX39A-219ENST00000592927 MIA2Q96PC5 1412 aa18.19■□□□□ 0.5
DDX39A-219ENST00000592927 ZNF644Q9H582 1327 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-219ENST00000592927 DNMT1P26358 1616 aaKnown RBP18.18■□□□□ 0.5
DDX39A-219ENST00000592927 PLEKHH2Q8IVE3 1493 aa18.18■□□□□ 0.5
DDX39A-219ENST00000592927 SPAG9O60271 1321 aaKnown RBP18.18■□□□□ 0.5
DDX39A-219ENST00000592927 NEURL4Q96JN8 1562 aa18.17■□□□□ 0.5
DDX39A-219ENST00000592927 SAMD9LQ8IVG5 1584 aa18.17■□□□□ 0.5
DDX39A-219ENST00000592927 VWDEQ8N2E2 1590 aa18.17■□□□□ 0.5
DDX39A-219ENST00000592927 TRIM26Q12899 539 aaPredicted RBP18.16■□□□□ 0.5
DDX39A-219ENST00000592927 FGD6Q6ZV73 1430 aa18.15■□□□□ 0.5
DDX39A-219ENST00000592927 KIAA1107Q9UPP5 1409 aa18.15■□□□□ 0.5
DDX39A-219ENST00000592927 HNRNPMP52272 730 aaKnown RBP eCLIP18.15■□□□□ 0.56e-8■■■■□ 24.6
DDX39A-219ENST00000592927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.14■□□□□ 0.49
DDX39A-219ENST00000592927 CAMSAP2Q08AD1 1489 aa18.14■□□□□ 0.49
DDX39A-219ENST00000592927 FBXO31Q5XUX0 539 aaPredicted RBP18.13■□□□□ 0.49
DDX39A-219ENST00000592927 SYCP2Q9BX26 1530 aa18.12■□□□□ 0.49
DDX39A-219ENST00000592927 THEMISQ8N1K5 641 aaPredicted RBP18.11■□□□□ 0.49
DDX39A-219ENST00000592927 LRRC7Q96NW7 1537 aa18.11■□□□□ 0.49
DDX39A-219ENST00000592927 PTPN23Q9H3S7 1636 aa18.1■□□□□ 0.49
DDX39A-219ENST00000592927 A2MP01023 1474 aa18.1■□□□□ 0.49
DDX39A-219ENST00000592927 NPHP4O75161 1426 aaPredicted RBP18.1■□□□□ 0.49
DDX39A-219ENST00000592927 TNRQ92752 1358 aa18.1■□□□□ 0.49
DDX39A-219ENST00000592927 FAM50AQ14320 339 aaKnown RBP18.1■□□□□ 0.49
DDX39A-219ENST00000592927 RSPH4AQ5TD94 716 aa18.1■□□□□ 0.49
DDX39A-219ENST00000592927 POLR1AO95602 1720 aaPredicted RBP18.09■□□□□ 0.49
DDX39A-219ENST00000592927 MBD5Q9P267 1494 aa18.08■□□□□ 0.49
DDX39A-219ENST00000592927 MED14O60244 1454 aa18.06■□□□□ 0.48
DDX39A-219ENST00000592927 PLXNC1O60486 1568 aa18.05■□□□□ 0.48
DDX39A-219ENST00000592927 CCDC141Q6ZP82 1450 aa18.05■□□□□ 0.48
DDX39A-219ENST00000592927 ATP7AQ04656 1500 aa18.04■□□□□ 0.48
DDX39A-219ENST00000592927 TSPY4P0CV99 314 aa18.04■□□□□ 0.48
DDX39A-219ENST00000592927 TSPY10P0CW01 314 aa18.04■□□□□ 0.48
DDX39A-219ENST00000592927 UPF1Q92900 1129 aaKnown RBP eCLIP18.04■□□□□ 0.48
DDX39A-219ENST00000592927 RNF17Q9BXT8 1623 aaKnown RBP18.04■□□□□ 0.48
DDX39A-219ENST00000592927 ARHGEF5Q12774 1597 aa18.04■□□□□ 0.48
DDX39A-219ENST00000592927 RRBP1Q9P2E9 1410 aaKnown RBP18.03■□□□□ 0.48
DDX39A-219ENST00000592927 SETD1AO15047 1707 aaKnown RBP18.01■□□□□ 0.47
DDX39A-219ENST00000592927 PCGF6Q9BYE7 350 aa18■□□□□ 0.47
DDX39A-219ENST00000592927 ABCC5O15440 1437 aa17.99■□□□□ 0.47
DDX39A-219ENST00000592927 FAM135AQ9P2D6 1515 aa17.99■□□□□ 0.47
DDX39A-219ENST00000592927 STRCP1A6NGW2 1772 aa17.99■□□□□ 0.47
DDX39A-219ENST00000592927 DAPK1P53355 1430 aa17.98■□□□□ 0.47
DDX39A-219ENST00000592927 UGGT1Q9NYU2 1555 aa17.98■□□□□ 0.47
DDX39A-219ENST00000592927 DEPDC5O75140 1603 aa17.98■□□□□ 0.47
DDX39A-219ENST00000592927 RTEL1-TNFRSF6BF6WH68 1400 aa17.98■□□□□ 0.47
DDX39A-219ENST00000592927 FAM135BQ49AJ0 1406 aa17.98■□□□□ 0.47
DDX39A-219ENST00000592927 INO80Q9ULG1 1556 aaPredicted RBP17.96■□□□□ 0.47
DDX39A-219ENST00000592927 PZPP20742 1482 aa17.96■□□□□ 0.47
DDX39A-219ENST00000592927 ITGAEP38570 1179 aa17.96■□□□□ 0.47
DDX39A-219ENST00000592927 SYNMO15061 1565 aa17.96■□□□□ 0.46
DDX39A-219ENST00000592927 NLRP1Q9C000 1473 aa17.95■□□□□ 0.46
DDX39A-219ENST00000592927 IQGAP1P46940 1657 aa17.95■□□□□ 0.46
DDX39A-219ENST00000592927 WASHC2CQ9Y4E1 1318 aa17.95■□□□□ 0.46
DDX39A-219ENST00000592927 KIF3BO15066 747 aa17.94■□□□□ 0.46
DDX39A-219ENST00000592927 CHIC2Q9UKJ5 165 aa17.94■□□□□ 0.46
DDX39A-219ENST00000592927 MAST1Q9Y2H9 1570 aa17.92■□□□□ 0.46
DDX39A-219ENST00000592927 TRIM52Q96A61 297 aa17.92■□□□□ 0.46
DDX39A-219ENST00000592927 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
DDX39A-219ENST00000592927 CROCC2H7BZ55 1655 aa17.9■□□□□ 0.46
DDX39A-219ENST00000592927 ANKRD30AQ9BXX3 1397 aa17.9■□□□□ 0.46
DDX39A-219ENST00000592927 RRP7BPQ9NSQ0 103 aa17.89■□□□□ 0.45
DDX39A-219ENST00000592927 KDM5DQ9BY66 1539 aa17.87■□□□□ 0.45
DDX39A-219ENST00000592927 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
DDX39A-219ENST00000592927 KIF15Q9NS87 1388 aa17.86■□□□□ 0.45
DDX39A-219ENST00000592927 ADGRL2O95490 1459 aa17.86■□□□□ 0.45
DDX39A-219ENST00000592927 SRCAPQ6ZRS2 3230 aa17.85■□□□□ 0.45
DDX39A-219ENST00000592927 ROCK1Q13464 1354 aa17.84■□□□□ 0.45
DDX39A-219ENST00000592927 LTKP29376 864 aa17.84■□□□□ 0.45
DDX39A-219ENST00000592927 ZNF772Q68DY9 489 aaPredicted RBP17.83■□□□□ 0.44
DDX39A-219ENST00000592927 TXNDC2Q86VQ3 553 aa17.83■□□□□ 0.44
DDX39A-219ENST00000592927 TMEM94Q12767 1356 aa17.82■□□□□ 0.44
DDX39A-219ENST00000592927 JCADQ9P266 1359 aa17.82■□□□□ 0.44
DDX39A-219ENST00000592927 DUOX2Q9NRD8 1548 aa17.82■□□□□ 0.44
DDX39A-219ENST00000592927 RBM33Q96EV2 1170 aaKnown RBP17.81■□□□□ 0.44
DDX39A-219ENST00000592927 ZC3H13Q5T200 1668 aaKnown RBP17.8■□□□□ 0.44
DDX39A-219ENST00000592927 MEX3CQ5U5Q3 659 aaKnown RBP17.8■□□□□ 0.44
DDX39A-219ENST00000592927 SCAF11Q99590 1463 aaKnown RBP17.8■□□□□ 0.44
DDX39A-219ENST00000592927 ROBO1Q9Y6N7 1651 aa17.8■□□□□ 0.44
DDX39A-219ENST00000592927 XIRP1Q702N8 1843 aaKnown RBP17.79■□□□□ 0.44
DDX39A-219ENST00000592927 RXRBP28702 533 aa17.79■□□□□ 0.44
DDX39A-219ENST00000592927 PROSER2Q86WR7 435 aaPredicted RBP17.78■□□□□ 0.44
DDX39A-219ENST00000592927 ERBINQ96RT1 1412 aa17.77■□□□□ 0.44
DDX39A-219ENST00000592927 ANKRD50Q9ULJ7 1429 aa17.76■□□□□ 0.43
DDX39A-219ENST00000592927 SLAIN2Q9P270 581 aa17.75■□□□□ 0.43
DDX39A-219ENST00000592927 EID1Q9Y6B2 187 aa17.75■□□□□ 0.43
DDX39A-219ENST00000592927 KCNA6P17658 529 aa17.74■□□□□ 0.43
DDX39A-219ENST00000592927 LRP6O75581 1613 aa17.73■□□□□ 0.43
DDX39A-219ENST00000592927 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
DDX39A-219ENST00000592927 HFM1A2PYH4 1435 aa17.72■□□□□ 0.43
DDX39A-219ENST00000592927 NAIPQ13075 1403 aa17.72■□□□□ 0.43
DDX39A-219ENST00000592927 EIF2AK4Q9P2K8 1649 aaKnown RBP17.72■□□□□ 0.43
DDX39A-219ENST00000592927 ERVK-7P63135 1459 aa17.71■□□□□ 0.43
DDX39A-219ENST00000592927 ARHGAP23Q9P227 1491 aa17.71■□□□□ 0.43
DDX39A-219ENST00000592927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.69■□□□□ 0.429e-7■■■□□ 16.9
DDX39A-219ENST00000592927 PHLPP1O60346 1717 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms