RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 CCDC144AA2RUR9 1427 aa21.95■■□□□ 1.1
MBD1-227ENST00000592060 INO80Q9ULG1 1556 aaPredicted RBP21.95■■□□□ 1.1
MBD1-227ENST00000592060 ATP10AO60312 1499 aa21.95■■□□□ 1.1
MBD1-227ENST00000592060 ZNF326Q5BKZ1 582 aaKnown RBP21.94■■□□□ 1.1
MBD1-227ENST00000592060 TRPM1Q7Z4N2 1603 aa21.93■■□□□ 1.1
MBD1-227ENST00000592060 DEPDC5O75140 1603 aa21.92■■□□□ 1.1
MBD1-227ENST00000592060 FANCAO15360 1455 aa21.92■■□□□ 1.1
MBD1-227ENST00000592060 ASXL2Q76L83 1435 aa21.91■■□□□ 1.1
MBD1-227ENST00000592060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.9■■□□□ 1.1
MBD1-227ENST00000592060 ATP7AQ04656 1500 aa21.89■■□□□ 1.1
MBD1-227ENST00000592060 SPAG9O60271 1321 aaKnown RBP21.89■■□□□ 1.1
MBD1-227ENST00000592060 PRAG1Q86YV5 1406 aa21.89■■□□□ 1.09
MBD1-227ENST00000592060 RIMBP3CA6NJZ7 1639 aa21.88■■□□□ 1.09
MBD1-227ENST00000592060 RIMBP3BA6NNM3 1639 aa21.88■■□□□ 1.09
MBD1-227ENST00000592060 RIMBP3Q9UFD9 1639 aa21.88■■□□□ 1.09
MBD1-227ENST00000592060 A2MP01023 1474 aa21.88■■□□□ 1.09
MBD1-227ENST00000592060 E9PCH4 1651 aa21.88■■□□□ 1.09
MBD1-227ENST00000592060 ARID4BQ4LE39 1312 aaPredicted RBP21.87■■□□□ 1.09
MBD1-227ENST00000592060 DCAF11Q8TEB1 546 aa21.87■■□□□ 1.09
MBD1-227ENST00000592060 LAMC1P11047 1609 aa21.86■■□□□ 1.09
MBD1-227ENST00000592060 PRKRIP1Q9H875 184 aaPredicted RBP21.85■■□□□ 1.09
MBD1-227ENST00000592060 SUPT16HQ9Y5B9 1047 aaKnown RBP21.85■■□□□ 1.09
MBD1-227ENST00000592060 AFAP1Q8N556 730 aa21.85■■□□□ 1.09
MBD1-227ENST00000592060 KDM2AQ9Y2K7 1162 aa21.85■■□□□ 1.09
MBD1-227ENST00000592060 ADGRL1O94910 1474 aa21.84■■□□□ 1.09
MBD1-227ENST00000592060 CARD11Q9BXL7 1154 aa21.84■■□□□ 1.09
MBD1-227ENST00000592060 DHX29Q7Z478 1369 aaKnown RBP21.83■■□□□ 1.09
MBD1-227ENST00000592060 EIF2AK4Q9P2K8 1649 aaKnown RBP21.83■■□□□ 1.09
MBD1-227ENST00000592060 VWDEQ8N2E2 1590 aa21.83■■□□□ 1.09
MBD1-227ENST00000592060 TET3O43151 1660 aa21.82■■□□□ 1.08
MBD1-227ENST00000592060 SPHKAPQ2M3C7 1700 aa21.81■■□□□ 1.08
MBD1-227ENST00000592060 GPRASP1Q5JY77 1395 aa21.8■■□□□ 1.08
MBD1-227ENST00000592060 TRPM2O94759 1503 aa21.8■■□□□ 1.08
MBD1-227ENST00000592060 SCAPERQ9BY12 1400 aa21.8■■□□□ 1.08
MBD1-227ENST00000592060 ROCK2O75116 1388 aaKnown RBP21.8■■□□□ 1.08
MBD1-227ENST00000592060 CEP152O94986 1710 aa21.79■■□□□ 1.08
MBD1-227ENST00000592060 MROH1Q8NDA8 1641 aa21.78■■□□□ 1.08
MBD1-227ENST00000592060 PRDM15P57071 1507 aaPredicted RBP21.78■■□□□ 1.08
MBD1-227ENST00000592060 KIDINS220Q9ULH0 1771 aa21.78■■□□□ 1.08
MBD1-227ENST00000592060 RNF17Q9BXT8 1623 aaKnown RBP21.78■■□□□ 1.08
MBD1-227ENST00000592060 CCDC184Q52MB2 194 aa21.77■■□□□ 1.08
MBD1-227ENST00000592060 CFAP74Q9C0B2 1584 aa21.77■■□□□ 1.08
MBD1-227ENST00000592060 PTPRTO14522 1441 aa21.75■■□□□ 1.07
MBD1-227ENST00000592060 PELP1Q8IZL8 1130 aaKnown RBP21.74■■□□□ 1.07
MBD1-227ENST00000592060 CLTCL1P53675 1640 aa21.74■■□□□ 1.07
MBD1-227ENST00000592060 ST20-MTHFSA0A0A6YYL1 179 aa21.74■■□□□ 1.07
MBD1-227ENST00000592060 RGL3Q3MIN7 710 aa21.74■■□□□ 1.07
MBD1-227ENST00000592060 MADDQ8WXG6 1647 aa21.71■■□□□ 1.07
MBD1-227ENST00000592060 ZNF518AQ6AHZ1 1483 aa21.71■■□□□ 1.07
MBD1-227ENST00000592060 HNRNPUQ00839 825 aaKnown RBP eCLIP21.7■■□□□ 1.07
MBD1-227ENST00000592060 NBPF1Q3BBV0 1214 aa21.68■■□□□ 1.06
MBD1-227ENST00000592060 NPM1P06748 294 aaKnown RBP eCLIP21.68■■□□□ 1.06
MBD1-227ENST00000592060 CYB5RLQ6IPT4 315 aa21.68■■□□□ 1.06
MBD1-227ENST00000592060 MRS2Q9HD23 443 aa21.68■■□□□ 1.06
MBD1-227ENST00000592060 NEURL4Q96JN8 1562 aa21.68■■□□□ 1.06
MBD1-227ENST00000592060 KANK1Q14678 1352 aa21.68■■□□□ 1.06
MBD1-227ENST00000592060 POLR3GLQ9BT43 218 aa21.67■■□□□ 1.06
MBD1-227ENST00000592060 CD109Q6YHK3 1445 aa21.66■■□□□ 1.06
MBD1-227ENST00000592060 COL17A1Q9UMD9 1497 aaPredicted RBP21.66■■□□□ 1.06
MBD1-227ENST00000592060 POGZQ7Z3K3 1410 aa21.65■■□□□ 1.06
MBD1-227ENST00000592060 EFCAB6Q5THR3 1501 aa21.65■■□□□ 1.06
MBD1-227ENST00000592060 IQGAP1P46940 1657 aa21.65■■□□□ 1.06
MBD1-227ENST00000592060 KIF3BO15066 747 aa21.63■■□□□ 1.05
MBD1-227ENST00000592060 LMTK2Q8IWU2 1503 aa21.63■■□□□ 1.05
MBD1-227ENST00000592060 PPRC1Q5VV67 1664 aaKnown RBP21.63■■□□□ 1.05
MBD1-227ENST00000592060 HECW2Q9P2P5 1572 aa21.63■■□□□ 1.05
MBD1-227ENST00000592060 FRMPD1Q5SYB0 1578 aa21.62■■□□□ 1.05
MBD1-227ENST00000592060 MLH3Q9UHC1 1453 aa21.61■■□□□ 1.05
MBD1-227ENST00000592060 FKBP8Q14318 412 aa21.59■■□□□ 1.05
MBD1-227ENST00000592060 FAM9BQ8IZU0 186 aa21.59■■□□□ 1.05
MBD1-227ENST00000592060 KIAA1210Q9ULL0 1709 aa21.59■■□□□ 1.05
MBD1-227ENST00000592060 ABCA6Q8N139 1617 aa21.58■■□□□ 1.05
MBD1-227ENST00000592060 TESK2Q96S53 571 aa21.58■■□□□ 1.05
MBD1-227ENST00000592060 MYT1LQ9UL68 1186 aa21.58■■□□□ 1.05
MBD1-227ENST00000592060 IFT172Q9UG01 1749 aa21.57■■□□□ 1.04
MBD1-227ENST00000592060 NEO1Q92859 1461 aa21.57■■□□□ 1.04
MBD1-227ENST00000592060 KIF1BO60333 1816 aa21.57■■□□□ 1.04
MBD1-227ENST00000592060 KTN1Q86UP2 1357 aaKnown RBP21.56■■□□□ 1.04
MBD1-227ENST00000592060 DISP3Q9P2K9 1392 aa21.56■■□□□ 1.04
MBD1-227ENST00000592060 UGGT1Q9NYU2 1555 aa21.56■■□□□ 1.04
MBD1-227ENST00000592060 ZBED9Q6R2W3 1325 aa21.56■■□□□ 1.04
MBD1-227ENST00000592060 STAC3Q96MF2 364 aa21.56■■□□□ 1.04
MBD1-227ENST00000592060 MROH2AA6NES4 1674 aa21.55■■□□□ 1.04
MBD1-227ENST00000592060 NEFLP07196 543 aa21.54■■□□□ 1.04
MBD1-227ENST00000592060 MAP3K4Q9Y6R4 1608 aa21.53■■□□□ 1.04
MBD1-227ENST00000592060 MYOM2P54296 1465 aa21.52■■□□□ 1.04
MBD1-227ENST00000592060 TRHP20396 242 aaPredicted RBP21.52■■□□□ 1.04
MBD1-227ENST00000592060 RICTORQ6R327 1708 aa21.5■■□□□ 1.03
MBD1-227ENST00000592060 SCAF11Q99590 1463 aaKnown RBP21.49■■□□□ 1.03
MBD1-227ENST00000592060 RALBP1Q15311 655 aa21.48■■□□□ 1.03
MBD1-227ENST00000592060 ADGRB3O60242 1522 aa21.48■■□□□ 1.03
MBD1-227ENST00000592060 MYBBP1AQ9BQG0 1328 aaKnown RBP21.48■■□□□ 1.03
MBD1-227ENST00000592060 DIP2CQ9Y2E4 1556 aa21.48■■□□□ 1.03
MBD1-227ENST00000592060 BRD4O60885 1362 aaPredicted RBP21.48■■□□□ 1.03
MBD1-227ENST00000592060 PARD3Q8TEW0 1356 aa21.48■■□□□ 1.03
MBD1-227ENST00000592060 CNGB1Q14028 1251 aaPredicted RBP21.47■■□□□ 1.03
MBD1-227ENST00000592060 BCANQ96GW7 911 aa21.47■■□□□ 1.03
MBD1-227ENST00000592060 ABCC3O15438 1527 aa21.46■■□□□ 1.03
MBD1-227ENST00000592060 PER1O15534 1290 aaPredicted RBP21.46■■□□□ 1.03
MBD1-227ENST00000592060 TMF1P82094 1093 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms