RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.25
SDF2-209ENST00000591903 DEPDC5O75140 1603 aa16.64■□□□□ 0.25
SDF2-209ENST00000591903 TNRQ92752 1358 aa16.63■□□□□ 0.25
SDF2-209ENST00000591903 ALKQ9UM73 1620 aa16.63■□□□□ 0.25
SDF2-209ENST00000591903 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
SDF2-209ENST00000591903 CFDP1Q9UEE9 299 aaPredicted RBP16.62■□□□□ 0.25
SDF2-209ENST00000591903 MED14O60244 1454 aa16.61■□□□□ 0.25
SDF2-209ENST00000591903 PZPP20742 1482 aa16.61■□□□□ 0.25
SDF2-209ENST00000591903 KDM5DQ9BY66 1539 aa16.6■□□□□ 0.25
SDF2-209ENST00000591903 SYNMO15061 1565 aa16.6■□□□□ 0.25
SDF2-209ENST00000591903 RNF17Q9BXT8 1623 aaKnown RBP16.6■□□□□ 0.25
SDF2-209ENST00000591903 CCNB3Q8WWL7 1395 aa16.6■□□□□ 0.25
SDF2-209ENST00000591903 RTEL1-TNFRSF6BF6WH68 1400 aa16.6■□□□□ 0.25
SDF2-209ENST00000591903 NLRP1Q9C000 1473 aa16.6■□□□□ 0.25
SDF2-209ENST00000591903 IQGAP1P46940 1657 aa16.59■□□□□ 0.25
SDF2-209ENST00000591903 THEMISQ8N1K5 641 aaPredicted RBP16.59■□□□□ 0.25
SDF2-209ENST00000591903 NPHP4O75161 1426 aaPredicted RBP16.59■□□□□ 0.25
SDF2-209ENST00000591903 UGGT1Q9NYU2 1555 aa16.58■□□□□ 0.24
SDF2-209ENST00000591903 DHX29Q7Z478 1369 aaKnown RBP16.57■□□□□ 0.24
SDF2-209ENST00000591903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.56■□□□□ 0.24
SDF2-209ENST00000591903 STRCP1A6NGW2 1772 aa16.55■□□□□ 0.24
SDF2-209ENST00000591903 FBXO31Q5XUX0 539 aaPredicted RBP16.54■□□□□ 0.24
SDF2-209ENST00000591903 LRRC7Q96NW7 1537 aa16.54■□□□□ 0.24
SDF2-209ENST00000591903 MBD5Q9P267 1494 aa16.54■□□□□ 0.24
SDF2-209ENST00000591903 MIA2Q96PC5 1412 aa16.53■□□□□ 0.24
SDF2-209ENST00000591903 TIAM1Q13009 1591 aa16.52■□□□□ 0.24
SDF2-209ENST00000591903 MTUS2Q5JR59 1369 aa16.51■□□□□ 0.23
SDF2-209ENST00000591903 WASHC2CQ9Y4E1 1318 aa16.51■□□□□ 0.23
SDF2-209ENST00000591903 KIF3BO15066 747 aa16.51■□□□□ 0.23
SDF2-209ENST00000591903 ZC3H13Q5T200 1668 aaKnown RBP16.49■□□□□ 0.23
SDF2-209ENST00000591903 CCDC141Q6ZP82 1450 aa16.48■□□□□ 0.23
SDF2-209ENST00000591903 EHBP1L1Q8N3D4 1523 aa16.47■□□□□ 0.23
SDF2-209ENST00000591903 RGS17Q9UGC6 210 aaPredicted RBP16.46■□□□□ 0.23
SDF2-209ENST00000591903 ZNF644Q9H582 1327 aaPredicted RBP16.45■□□□□ 0.22
SDF2-209ENST00000591903 RSPH4AQ5TD94 716 aa16.45■□□□□ 0.22
SDF2-209ENST00000591903 SENP3Q9H4L4 574 aaPredicted RBP16.45■□□□□ 0.22
SDF2-209ENST00000591903 XIRP1Q702N8 1843 aaKnown RBP16.45■□□□□ 0.22
SDF2-209ENST00000591903 UBR1Q8IWV7 1749 aa16.43■□□□□ 0.22
SDF2-209ENST00000591903 CEP162Q5TB80 1403 aa16.42■□□□□ 0.22
SDF2-209ENST00000591903 CAMSAP2Q08AD1 1489 aa16.4■□□□□ 0.22
SDF2-209ENST00000591903 SCAF11Q99590 1463 aaKnown RBP16.4■□□□□ 0.22
SDF2-209ENST00000591903 ABCC3O15438 1527 aa16.4■□□□□ 0.22
SDF2-209ENST00000591903 ARHGEF5Q12774 1597 aa16.39■□□□□ 0.21
SDF2-209ENST00000591903 FAM135BQ49AJ0 1406 aa16.39■□□□□ 0.21
SDF2-209ENST00000591903 EIF2AK4Q9P2K8 1649 aaKnown RBP16.39■□□□□ 0.21
SDF2-209ENST00000591903 ERVK-7P63135 1459 aa16.39■□□□□ 0.21
SDF2-209ENST00000591903 CFAP65Q6ZU64 1925 aaKnown RBP16.38■□□□□ 0.21
SDF2-209ENST00000591903 SLIT1O75093 1534 aa16.37■□□□□ 0.21
SDF2-209ENST00000591903 ARHGAP23Q9P227 1491 aa16.35■□□□□ 0.21
SDF2-209ENST00000591903 TSPY4P0CV99 314 aa16.35■□□□□ 0.21
SDF2-209ENST00000591903 TSPY10P0CW01 314 aa16.35■□□□□ 0.21
SDF2-209ENST00000591903 POTEAQ6S8J7 498 aa16.35■□□□□ 0.21
SDF2-209ENST00000591903 CEP152O94986 1710 aa16.35■□□□□ 0.21
SDF2-209ENST00000591903 MAST1Q9Y2H9 1570 aa16.34■□□□□ 0.21
SDF2-209ENST00000591903 ROBO1Q9Y6N7 1651 aa16.34■□□□□ 0.21
SDF2-209ENST00000591903 NCOA2Q15596 1464 aa16.33■□□□□ 0.2
SDF2-209ENST00000591903 SETD1AO15047 1707 aaKnown RBP16.32■□□□□ 0.2
SDF2-209ENST00000591903 LRRC9Q6ZRR7 1453 aa16.32■□□□□ 0.2
SDF2-209ENST00000591903 MROH1Q8NDA8 1641 aa16.31■□□□□ 0.2
SDF2-209ENST00000591903 TXNDC2Q86VQ3 553 aa16.31■□□□□ 0.2
SDF2-209ENST00000591903 EID1Q9Y6B2 187 aa16.31■□□□□ 0.2
SDF2-209ENST00000591903 KDM5AP29375 1690 aaKnown RBP16.3■□□□□ 0.2
SDF2-209ENST00000591903 LTKP29376 864 aa16.29■□□□□ 0.2
SDF2-209ENST00000591903 PHLPP1O60346 1717 aa16.27■□□□□ 0.19
SDF2-209ENST00000591903 ARHGAP31Q2M1Z3 1444 aa16.27■□□□□ 0.19
SDF2-209ENST00000591903 TMEM94Q12767 1356 aa16.26■□□□□ 0.19
SDF2-209ENST00000591903 PIK3C2BO00750 1634 aa16.26■□□□□ 0.19
SDF2-209ENST00000591903 MAP3K1Q13233 1512 aa16.25■□□□□ 0.19
SDF2-209ENST00000591903 TMEM2Q9UHN6 1383 aa16.25■□□□□ 0.19
SDF2-209ENST00000591903 PRDM15P57071 1507 aaPredicted RBP16.24■□□□□ 0.19
SDF2-209ENST00000591903 DUOX2Q9NRD8 1548 aa16.24■□□□□ 0.19
SDF2-209ENST00000591903 NKTRP30414 1462 aaKnown RBP16.23■□□□□ 0.19
SDF2-209ENST00000591903 KCNA6P17658 529 aa16.23■□□□□ 0.19
SDF2-209ENST00000591903 JCADQ9P266 1359 aa16.23■□□□□ 0.19
SDF2-209ENST00000591903 NWD1Q149M9 1564 aa16.22■□□□□ 0.19
SDF2-209ENST00000591903 EFCAB6Q5THR3 1501 aa16.21■□□□□ 0.19
SDF2-209ENST00000591903 TET3O43151 1660 aa16.21■□□□□ 0.18
SDF2-209ENST00000591903 PROSER2Q86WR7 435 aaPredicted RBP16.2■□□□□ 0.18
SDF2-209ENST00000591903 STAG3Q9UJ98 1225 aa16.2■□□□□ 0.18
SDF2-209ENST00000591903 MSH6P52701 1360 aa16.2■□□□□ 0.18
SDF2-209ENST00000591903 COL16A1Q07092 1604 aaPredicted RBP16.18■□□□□ 0.18
SDF2-209ENST00000591903 ZNF772Q68DY9 489 aaPredicted RBP16.17■□□□□ 0.18
SDF2-209ENST00000591903 UPF1Q92900 1129 aaKnown RBP eCLIP16.17■□□□□ 0.18
SDF2-209ENST00000591903 ERBINQ96RT1 1412 aa16.17■□□□□ 0.18
SDF2-209ENST00000591903 SLAIN2Q9P270 581 aa16.16■□□□□ 0.18
SDF2-209ENST00000591903 FGD6Q6ZV73 1430 aa16.16■□□□□ 0.18
SDF2-209ENST00000591903 SPATA31A6Q5VVP1 1343 aa16.16■□□□□ 0.18
SDF2-209ENST00000591903 CHD2O14647 1828 aaKnown RBP16.15■□□□□ 0.18
SDF2-209ENST00000591903 MYOM3Q5VTT5 1437 aa16.14■□□□□ 0.17
SDF2-209ENST00000591903 CROCC2H7BZ55 1655 aa16.14■□□□□ 0.17
SDF2-209ENST00000591903 SHPRHQ149N8 1683 aa16.14■□□□□ 0.17
SDF2-209ENST00000591903 KANK1Q14678 1352 aa16.13■□□□□ 0.17
SDF2-209ENST00000591903 SLC26A8Q96RN1 970 aa16.13■□□□□ 0.17
SDF2-209ENST00000591903 ADGRB3O60242 1522 aa16.13■□□□□ 0.17
SDF2-209ENST00000591903 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
SDF2-209ENST00000591903 LMTK2Q8IWU2 1503 aa16.12■□□□□ 0.17
SDF2-209ENST00000591903 KIF15Q9NS87 1388 aa16.12■□□□□ 0.17
SDF2-209ENST00000591903 RBM33Q96EV2 1170 aaKnown RBP16.11■□□□□ 0.17
SDF2-209ENST00000591903 LRP6O75581 1613 aa16.11■□□□□ 0.17
SDF2-209ENST00000591903 NCOA3Q9Y6Q9 1424 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms