RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 KDM5DQ9BY66 1539 aa27.56■■■□□ 2
POLR2E-208ENST00000591709 VWDEQ8N2E2 1590 aa27.56■■■□□ 2
POLR2E-208ENST00000591709 TOM1O60784 492 aa27.54■■■□□ 2
POLR2E-208ENST00000591709 TNRQ92752 1358 aa27.54■■■□□ 2
POLR2E-208ENST00000591709 ALKQ9UM73 1620 aa27.54■■■□□ 2
POLR2E-208ENST00000591709 MTUS2Q5JR59 1369 aa27.53■■■□□ 2
POLR2E-208ENST00000591709 PZPP20742 1482 aa27.52■■■□□ 2
POLR2E-208ENST00000591709 MBD5Q9P267 1494 aa27.52■■■□□ 2
POLR2E-208ENST00000591709 ZNF644Q9H582 1327 aaPredicted RBP27.52■■■□□ 2
POLR2E-208ENST00000591709 STRCP1A6NGW2 1772 aa27.52■■■□□ 2
POLR2E-208ENST00000591709 IQGAP1P46940 1657 aa27.51■■□□□ 1.99
POLR2E-208ENST00000591709 DEPDC5O75140 1603 aa27.5■■□□□ 1.99
POLR2E-208ENST00000591709 EHBP1L1Q8N3D4 1523 aa27.5■■□□□ 1.99
POLR2E-208ENST00000591709 FAM135AQ9P2D6 1515 aa27.5■■□□□ 1.99
POLR2E-208ENST00000591709 FBXO31Q5XUX0 539 aaPredicted RBP27.49■■□□□ 1.99
POLR2E-208ENST00000591709 RTEL1-TNFRSF6BF6WH68 1400 aa27.49■■□□□ 1.99
POLR2E-208ENST00000591709 DHX29Q7Z478 1369 aaKnown RBP27.47■■□□□ 1.99
POLR2E-208ENST00000591709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.47■■□□□ 1.991e-6■■□□□ 13.7
POLR2E-208ENST00000591709 UGGT1Q9NYU2 1555 aa27.46■■□□□ 1.99
POLR2E-208ENST00000591709 PHF23Q9BUL5 403 aaPredicted RBP27.45■■□□□ 1.98
POLR2E-208ENST00000591709 RNF17Q9BXT8 1623 aaKnown RBP27.44■■□□□ 1.98
POLR2E-208ENST00000591709 KIF3BO15066 747 aa27.43■■□□□ 1.98
POLR2E-208ENST00000591709 NPHP4O75161 1426 aaPredicted RBP27.42■■□□□ 1.98
POLR2E-208ENST00000591709 CCDC141Q6ZP82 1450 aa27.42■■□□□ 1.98
POLR2E-208ENST00000591709 NLRP1Q9C000 1473 aa27.42■■□□□ 1.98
POLR2E-208ENST00000591709 SYNMO15061 1565 aa27.42■■□□□ 1.98
POLR2E-208ENST00000591709 CFAP65Q6ZU64 1925 aaKnown RBP27.41■■□□□ 1.98
POLR2E-208ENST00000591709 MED14O60244 1454 aa27.41■■□□□ 1.98
POLR2E-208ENST00000591709 ANKLE2Q86XL3 938 aa27.4■■□□□ 1.98
POLR2E-208ENST00000591709 CAMSAP2Q08AD1 1489 aa27.38■■□□□ 1.97
POLR2E-208ENST00000591709 MIA2Q96PC5 1412 aa27.37■■□□□ 1.97
POLR2E-208ENST00000591709 SENP3Q9H4L4 574 aaPredicted RBP27.37■■□□□ 1.97
POLR2E-208ENST00000591709 ZC3H13Q5T200 1668 aaKnown RBP27.36■■□□□ 1.97
POLR2E-208ENST00000591709 CEP162Q5TB80 1403 aa27.36■■□□□ 1.97
POLR2E-208ENST00000591709 WASHC2CQ9Y4E1 1318 aa27.36■■□□□ 1.97
POLR2E-208ENST00000591709 THEMISQ8N1K5 641 aaPredicted RBP27.34■■□□□ 1.97
POLR2E-208ENST00000591709 LRRC7Q96NW7 1537 aa27.33■■□□□ 1.97
POLR2E-208ENST00000591709 CEP152O94986 1710 aa27.33■■□□□ 1.96
POLR2E-208ENST00000591709 XIRP1Q702N8 1843 aaKnown RBP27.32■■□□□ 1.96
POLR2E-208ENST00000591709 UBR1Q8IWV7 1749 aa27.31■■□□□ 1.96
POLR2E-208ENST00000591709 ARHGEF5Q12774 1597 aa27.3■■□□□ 1.96
POLR2E-208ENST00000591709 ABCC3O15438 1527 aa27.28■■□□□ 1.96
POLR2E-208ENST00000591709 NCOA2Q15596 1464 aa27.27■■□□□ 1.96
POLR2E-208ENST00000591709 EIF2AK4Q9P2K8 1649 aaKnown RBP27.24■■□□□ 1.95
POLR2E-208ENST00000591709 ERVK-7P63135 1459 aa27.23■■□□□ 1.95
POLR2E-208ENST00000591709 MROH1Q8NDA8 1641 aa27.23■■□□□ 1.95
POLR2E-208ENST00000591709 MAST1Q9Y2H9 1570 aa27.19■■□□□ 1.94
POLR2E-208ENST00000591709 RSPH4AQ5TD94 716 aa27.17■■□□□ 1.94
POLR2E-208ENST00000591709 SCAF11Q99590 1463 aaKnown RBP27.17■■□□□ 1.94
POLR2E-208ENST00000591709 RGS17Q9UGC6 210 aaPredicted RBP27.12■■□□□ 1.93
POLR2E-208ENST00000591709 TSPY4P0CV99 314 aa27.11■■□□□ 1.93
POLR2E-208ENST00000591709 TSPY10P0CW01 314 aa27.11■■□□□ 1.93
POLR2E-208ENST00000591709 SLIT1O75093 1534 aa27.1■■□□□ 1.93
POLR2E-208ENST00000591709 PIK3C2BO00750 1634 aa27.08■■□□□ 1.93
POLR2E-208ENST00000591709 ARHGAP23Q9P227 1491 aa27.08■■□□□ 1.93
POLR2E-208ENST00000591709 SETD1AO15047 1707 aaKnown RBP27.07■■□□□ 1.92
POLR2E-208ENST00000591709 ROBO1Q9Y6N7 1651 aa27.06■■□□□ 1.92
POLR2E-208ENST00000591709 LTKP29376 864 aa27.03■■□□□ 1.92
POLR2E-208ENST00000591709 PRDM15P57071 1507 aaPredicted RBP27.03■■□□□ 1.92
POLR2E-208ENST00000591709 CROCC2H7BZ55 1655 aa27.02■■□□□ 1.92
POLR2E-208ENST00000591709 DUOX2Q9NRD8 1548 aa27■■□□□ 1.91
POLR2E-208ENST00000591709 TXNDC2Q86VQ3 553 aa27■■□□□ 1.91
POLR2E-208ENST00000591709 KDM5AP29375 1690 aaKnown RBP26.98■■□□□ 1.91
POLR2E-208ENST00000591709 LRRC9Q6ZRR7 1453 aa26.97■■□□□ 1.91
POLR2E-208ENST00000591709 FAM135BQ49AJ0 1406 aa26.97■■□□□ 1.91
POLR2E-208ENST00000591709 MAP3K1Q13233 1512 aa26.96■■□□□ 1.91
POLR2E-208ENST00000591709 POTEAQ6S8J7 498 aa26.95■■□□□ 1.9
POLR2E-208ENST00000591709 ARHGAP31Q2M1Z3 1444 aa26.94■■□□□ 1.9
POLR2E-208ENST00000591709 PHLPP1O60346 1717 aa26.93■■□□□ 1.9
POLR2E-208ENST00000591709 EID1Q9Y6B2 187 aa26.93■■□□□ 1.9
POLR2E-208ENST00000591709 TMEM94Q12767 1356 aa26.92■■□□□ 1.9
POLR2E-208ENST00000591709 EFCAB6Q5THR3 1501 aa26.91■■□□□ 1.9
POLR2E-208ENST00000591709 TMEM2Q9UHN6 1383 aa26.9■■□□□ 1.9
POLR2E-208ENST00000591709 NWD1Q149M9 1564 aa26.88■■□□□ 1.89
POLR2E-208ENST00000591709 MYOM3Q5VTT5 1437 aa26.88■■□□□ 1.89
POLR2E-208ENST00000591709 KIF15Q9NS87 1388 aa26.87■■□□□ 1.89
POLR2E-208ENST00000591709 MYO5BQ9ULV0 1848 aa26.87■■□□□ 1.89
POLR2E-208ENST00000591709 ERBINQ96RT1 1412 aa26.87■■□□□ 1.89
POLR2E-208ENST00000591709 TET3O43151 1660 aa26.86■■□□□ 1.89
POLR2E-208ENST00000591709 RBM33Q96EV2 1170 aaKnown RBP26.84■■□□□ 1.89
POLR2E-208ENST00000591709 STAG3Q9UJ98 1225 aa26.84■■□□□ 1.89
POLR2E-208ENST00000591709 NKTRP30414 1462 aaKnown RBP26.83■■□□□ 1.89
POLR2E-208ENST00000591709 VPS8Q8N3P4 1428 aa26.82■■□□□ 1.88
POLR2E-208ENST00000591709 ADGRB3O60242 1522 aa26.82■■□□□ 1.88
POLR2E-208ENST00000591709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.81■■□□□ 1.881e-12■□□□□ 9.3
POLR2E-208ENST00000591709 PTPN23Q9H3S7 1636 aa26.8■■□□□ 1.88
POLR2E-208ENST00000591709 KCNA6P17658 529 aa26.8■■□□□ 1.88
POLR2E-208ENST00000591709 CHD2O14647 1828 aaKnown RBP26.8■■□□□ 1.88
POLR2E-208ENST00000591709 PROSER2Q86WR7 435 aaPredicted RBP26.79■■□□□ 1.88
POLR2E-208ENST00000591709 SLC26A8Q96RN1 970 aa26.79■■□□□ 1.88
POLR2E-208ENST00000591709 COL16A1Q07092 1604 aaPredicted RBP26.78■■□□□ 1.88
POLR2E-208ENST00000591709 KANK4Q5T7N3 995 aaPredicted RBP26.77■■□□□ 1.88
POLR2E-208ENST00000591709 LMTK2Q8IWU2 1503 aa26.76■■□□□ 1.87
POLR2E-208ENST00000591709 ABCC5O15440 1437 aa26.76■■□□□ 1.87
POLR2E-208ENST00000591709 KANK1Q14678 1352 aa26.76■■□□□ 1.87
POLR2E-208ENST00000591709 RRP7BPQ9NSQ0 103 aa26.76■■□□□ 1.87
POLR2E-208ENST00000591709 GCC2Q8IWJ2 1684 aa26.76■■□□□ 1.87
POLR2E-208ENST00000591709 MSH6P52701 1360 aa26.75■■□□□ 1.87
POLR2E-208ENST00000591709 IDI1Q13907 227 aa26.74■■□□□ 1.87
POLR2E-208ENST00000591709 JCADQ9P266 1359 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 1580.2 ms