RNA–Protein interactions for RNA: ENST00000590115.1

LDLRAD4-213, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-213ENST00000590115 SCAF1Q9H7N4 1312 aaKnown RBP9.6□□□□□ -0.87
LDLRAD4-213ENST00000590115 EFCAB2Q5VUJ9 269 aa9.6□□□□□ -0.87
LDLRAD4-213ENST00000590115 ZMYM3Q14202 1370 aa9.6□□□□□ -0.87
LDLRAD4-213ENST00000590115 INO80Q9ULG1 1556 aaPredicted RBP9.59□□□□□ -0.87
LDLRAD4-213ENST00000590115 PPP6R1Q9UPN7 881 aa9.59□□□□□ -0.87
LDLRAD4-213ENST00000590115 CDK11AQ9UQ88 783 aaPredicted RBP9.59□□□□□ -0.87
LDLRAD4-213ENST00000590115 SYCP2Q9BX26 1530 aa9.59□□□□□ -0.87
LDLRAD4-213ENST00000590115 A2ML1A8K2U0 1454 aa9.59□□□□□ -0.87
LDLRAD4-213ENST00000590115 CAMSAP2Q08AD1 1489 aa9.59□□□□□ -0.87
LDLRAD4-213ENST00000590115 SYNMO15061 1565 aa9.58□□□□□ -0.88
LDLRAD4-213ENST00000590115 FGD6Q6ZV73 1430 aa9.58□□□□□ -0.88
LDLRAD4-213ENST00000590115 CCNB3Q8WWL7 1395 aa9.58□□□□□ -0.88
LDLRAD4-213ENST00000590115 IQGAP1P46940 1657 aa9.58□□□□□ -0.88
LDLRAD4-213ENST00000590115 DEPDC5O75140 1603 aa9.57□□□□□ -0.88
LDLRAD4-213ENST00000590115 TOM1O60784 492 aa9.57□□□□□ -0.88
LDLRAD4-213ENST00000590115 MIA2Q96PC5 1412 aa9.56□□□□□ -0.88
LDLRAD4-213ENST00000590115 RRBP1Q9P2E9 1410 aaKnown RBP9.56□□□□□ -0.88
LDLRAD4-213ENST00000590115 PTPN23Q9H3S7 1636 aa9.56□□□□□ -0.88
LDLRAD4-213ENST00000590115 ZC3H13Q5T200 1668 aaKnown RBP9.56□□□□□ -0.88
LDLRAD4-213ENST00000590115 ABCC5O15440 1437 aa9.56□□□□□ -0.88
LDLRAD4-213ENST00000590115 KIAA1107Q9UPP5 1409 aa9.56□□□□□ -0.88
LDLRAD4-213ENST00000590115 ADGBQ8N7X0 1667 aa9.55□□□□□ -0.88
LDLRAD4-213ENST00000590115 ESF1Q9H501 851 aaKnown RBP9.55□□□□□ -0.88
LDLRAD4-213ENST00000590115 ATP7AQ04656 1500 aa9.55□□□□□ -0.88
LDLRAD4-213ENST00000590115 ARHGEF5Q12774 1597 aa9.54□□□□□ -0.88
LDLRAD4-213ENST00000590115 HNRNPMP52272 730 aaKnown RBP eCLIP9.54□□□□□ -0.888e-7■■■■□ 26.4
LDLRAD4-213ENST00000590115 SRCAPQ6ZRS2 3230 aa9.54□□□□□ -0.88
LDLRAD4-213ENST00000590115 LRRC7Q96NW7 1537 aa9.53□□□□□ -0.88
LDLRAD4-213ENST00000590115 CFDP1Q9UEE9 299 aaPredicted RBP9.53□□□□□ -0.88
LDLRAD4-213ENST00000590115 MED14O60244 1454 aa9.53□□□□□ -0.88
LDLRAD4-213ENST00000590115 CROCC2H7BZ55 1655 aa9.52□□□□□ -0.89
LDLRAD4-213ENST00000590115 MYT1LQ9UL68 1186 aa9.52□□□□□ -0.89
LDLRAD4-213ENST00000590115 MAST1Q9Y2H9 1570 aa9.51□□□□□ -0.89
LDLRAD4-213ENST00000590115 POTEAQ6S8J7 498 aa9.51□□□□□ -0.89
LDLRAD4-213ENST00000590115 DAPK1P53355 1430 aa9.5□□□□□ -0.89
LDLRAD4-213ENST00000590115 A2MP01023 1474 aa9.49□□□□□ -0.89
LDLRAD4-213ENST00000590115 CCDC141Q6ZP82 1450 aa9.49□□□□□ -0.89
LDLRAD4-213ENST00000590115 SENP3Q9H4L4 574 aaPredicted RBP9.49□□□□□ -0.89
LDLRAD4-213ENST00000590115 ZNF777Q9ULD5 760 aaPredicted RBP9.49□□□□□ -0.89
LDLRAD4-213ENST00000590115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.49□□□□□ -0.89
LDLRAD4-213ENST00000590115 CFAP65Q6ZU64 1925 aaKnown RBP9.48□□□□□ -0.89
LDLRAD4-213ENST00000590115 ROBO1Q9Y6N7 1651 aa9.48□□□□□ -0.89
LDLRAD4-213ENST00000590115 NPHP4O75161 1426 aaPredicted RBP9.48□□□□□ -0.89
LDLRAD4-213ENST00000590115 PLEKHH2Q8IVE3 1493 aa9.47□□□□□ -0.89
LDLRAD4-213ENST00000590115 ADGRL2O95490 1459 aa9.47□□□□□ -0.89
LDLRAD4-213ENST00000590115 PZPP20742 1482 aa9.47□□□□□ -0.89
LDLRAD4-213ENST00000590115 APLP2Q06481 763 aa9.46□□□□□ -0.9
LDLRAD4-213ENST00000590115 RTEL1-TNFRSF6BF6WH68 1400 aa9.46□□□□□ -0.9
LDLRAD4-213ENST00000590115 UGGT1Q9NYU2 1555 aa9.46□□□□□ -0.9
LDLRAD4-213ENST00000590115 MROH1Q8NDA8 1641 aa9.45□□□□□ -0.9
LDLRAD4-213ENST00000590115 UBR1Q8IWV7 1749 aa9.45□□□□□ -0.9
LDLRAD4-213ENST00000590115 KDM5DQ9BY66 1539 aa9.45□□□□□ -0.9
LDLRAD4-213ENST00000590115 TNRQ92752 1358 aa9.44□□□□□ -0.9
LDLRAD4-213ENST00000590115 FAM135AQ9P2D6 1515 aa9.44□□□□□ -0.9
LDLRAD4-213ENST00000590115 PHLPP1O60346 1717 aa9.42□□□□□ -0.9
LDLRAD4-213ENST00000590115 NLRP1Q9C000 1473 aa9.42□□□□□ -0.9
LDLRAD4-213ENST00000590115 SPAG9O60271 1321 aaKnown RBP9.42□□□□□ -0.9
LDLRAD4-213ENST00000590115 FBXO31Q5XUX0 539 aaPredicted RBP9.41□□□□□ -0.9
LDLRAD4-213ENST00000590115 GGT6Q6P531 493 aa9.41□□□□□ -0.9
LDLRAD4-213ENST00000590115 NAIPQ13075 1403 aa9.4□□□□□ -0.9
LDLRAD4-213ENST00000590115 FAM135BQ49AJ0 1406 aa9.4□□□□□ -0.9
LDLRAD4-213ENST00000590115 FAM50AQ14320 339 aaKnown RBP9.4□□□□□ -0.9
LDLRAD4-213ENST00000590115 CHIC2Q9UKJ5 165 aa9.4□□□□□ -0.9
LDLRAD4-213ENST00000590115 ROCK1Q13464 1354 aa9.39□□□□□ -0.91
LDLRAD4-213ENST00000590115 DHX29Q7Z478 1369 aaKnown RBP9.39□□□□□ -0.91
LDLRAD4-213ENST00000590115 COL16A1Q07092 1604 aaPredicted RBP9.39□□□□□ -0.91
LDLRAD4-213ENST00000590115 ANKLE2Q86XL3 938 aa9.39□□□□□ -0.91
LDLRAD4-213ENST00000590115 UPF1Q92900 1129 aaKnown RBP eCLIP9.39□□□□□ -0.91
LDLRAD4-213ENST00000590115 CEP152O94986 1710 aa9.39□□□□□ -0.91
LDLRAD4-213ENST00000590115 LRP6O75581 1613 aa9.38□□□□□ -0.91
LDLRAD4-213ENST00000590115 KIF15Q9NS87 1388 aa9.37□□□□□ -0.91
LDLRAD4-213ENST00000590115 RSPH4AQ5TD94 716 aa9.37□□□□□ -0.91
LDLRAD4-213ENST00000590115 DUOX2Q9NRD8 1548 aa9.36□□□□□ -0.91
LDLRAD4-213ENST00000590115 SHPRHQ149N8 1683 aa9.36□□□□□ -0.91
LDLRAD4-213ENST00000590115 GCC2Q8IWJ2 1684 aa9.36□□□□□ -0.91
LDLRAD4-213ENST00000590115 RRP7BPQ9NSQ0 103 aa9.36□□□□□ -0.91
LDLRAD4-213ENST00000590115 HFM1A2PYH4 1435 aa9.36□□□□□ -0.91
LDLRAD4-213ENST00000590115 ARHGAP23Q9P227 1491 aa9.35□□□□□ -0.91
LDLRAD4-213ENST00000590115 THEMISQ8N1K5 641 aaPredicted RBP9.35□□□□□ -0.91
LDLRAD4-213ENST00000590115 SLIT1O75093 1534 aa9.35□□□□□ -0.91
LDLRAD4-213ENST00000590115 EIF2AK4Q9P2K8 1649 aaKnown RBP9.34□□□□□ -0.91
LDLRAD4-213ENST00000590115 SCAF11Q99590 1463 aaKnown RBP9.34□□□□□ -0.91
LDLRAD4-213ENST00000590115 UNC13BO14795 1591 aa9.34□□□□□ -0.91
LDLRAD4-213ENST00000590115 NWD1Q149M9 1564 aa9.34□□□□□ -0.91
LDLRAD4-213ENST00000590115 ITGAEP38570 1179 aa9.34□□□□□ -0.91
LDLRAD4-213ENST00000590115 ABCC3O15438 1527 aa9.34□□□□□ -0.91
LDLRAD4-213ENST00000590115 PRDM15P57071 1507 aaPredicted RBP9.34□□□□□ -0.91
LDLRAD4-213ENST00000590115 ERVK-7P63135 1459 aa9.34□□□□□ -0.91
LDLRAD4-213ENST00000590115 ERBINQ96RT1 1412 aa9.33□□□□□ -0.92
LDLRAD4-213ENST00000590115 KDM5AP29375 1690 aaKnown RBP9.32□□□□□ -0.92
LDLRAD4-213ENST00000590115 ANKRD50Q9ULJ7 1429 aa9.32□□□□□ -0.92
LDLRAD4-213ENST00000590115 PIK3C2BO00750 1634 aa9.32□□□□□ -0.92
LDLRAD4-213ENST00000590115 ANKRD30AQ9BXX3 1397 aa9.32□□□□□ -0.92
LDLRAD4-213ENST00000590115 TSPY4P0CV99 314 aa9.31□□□□□ -0.92
LDLRAD4-213ENST00000590115 TSPY10P0CW01 314 aa9.31□□□□□ -0.92
LDLRAD4-213ENST00000590115 CHD2O14647 1828 aaKnown RBP9.31□□□□□ -0.92
LDLRAD4-213ENST00000590115 LMTK2Q8IWU2 1503 aa9.31□□□□□ -0.92
LDLRAD4-213ENST00000590115 CDK12Q9NYV4 1490 aaPredicted RBP9.3□□□□□ -0.92
LDLRAD4-213ENST00000590115 EP400Q96L91 3159 aa9.3□□□□□ -0.92
LDLRAD4-213ENST00000590115 TET3O43151 1660 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms